RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 PANK1Q8TE04 598 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 ZBTB3Q9H5J0 574 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 MAP3K2Q9Y2U5 619 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 PAPPAQ13219 1627 aa9.61□□□□□ -0.87
CCDC93-207ENST00000474006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.61□□□□□ -0.87
CCDC93-207ENST00000474006 MAP3K7O43318 606 aa9.61□□□□□ -0.87
CCDC93-207ENST00000474006 RLBP1P12271 317 aa9.61□□□□□ -0.87
CCDC93-207ENST00000474006 RFC4P35249 363 aa9.61□□□□□ -0.87
CCDC93-207ENST00000474006 DNAAF4Q8WXU2 420 aa9.61□□□□□ -0.87
CCDC93-207ENST00000474006 METTL22Q9BUU2 404 aaPredicted RBP9.61□□□□□ -0.87
CCDC93-207ENST00000474006 NPDC1Q9NQX5 325 aaPredicted RBP9.61□□□□□ -0.87
CCDC93-207ENST00000474006 STK32BQ9NY57 414 aa9.61□□□□□ -0.87
CCDC93-207ENST00000474006 KAT6BQ8WYB5 2073 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 MAP3K15Q6ZN16 1313 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 ZPR1O75312 459 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 CAMTA2O94983 1202 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 POTEJP0CG39 1038 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 SSFA2P28290 1259 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 IRX6P78412 446 aaPredicted RBP9.6□□□□□ -0.87
CCDC93-207ENST00000474006 DOK7Q18PE1 504 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 BEND3Q5T5X7 828 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 COL23A1Q86Y22 540 aaPredicted RBP9.6□□□□□ -0.87
CCDC93-207ENST00000474006 FTSJ3Q8IY81 847 aaKnown RBP9.6□□□□□ -0.87
CCDC93-207ENST00000474006 TMEM57Q8N5G2 664 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 CDHR5Q9HBB8 845 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
CCDC93-207ENST00000474006 NARFQ9UHQ1 456 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 BTAF1O14981 1849 aa9.6□□□□□ -0.87
CCDC93-207ENST00000474006 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 CCT4P50991 539 aaKnown RBP9.59□□□□□ -0.87
CCDC93-207ENST00000474006 FOSBP53539 338 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 TCIRG1Q13488 830 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 USPL1Q5W0Q7 1092 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 INTS3Q68E01 1043 aaKnown RBP9.59□□□□□ -0.87
CCDC93-207ENST00000474006 GIGYF2Q6Y7W6 1299 aaKnown RBP9.59□□□□□ -0.87
CCDC93-207ENST00000474006 FLAD1Q8NFF5 587 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 MYD88Q99836 296 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 ADCY9O60503 1353 aa9.59□□□□□ -0.87
CCDC93-207ENST00000474006 SBF2Q86WG5 1849 aa9.59□□□□□ -0.88
CCDC93-207ENST00000474006 ABCC4O15439 1325 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 UBR2Q8IWV8 1755 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 IGKV5-2P06315 115 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 HOXB3P14651 431 aaPredicted RBP9.58□□□□□ -0.88
CCDC93-207ENST00000474006 NEXNQ0ZGT2 675 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 CWF19L2Q2TBE0 894 aaKnown RBP9.58□□□□□ -0.88
CCDC93-207ENST00000474006 CLEC4GQ6UXB4 293 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 LINS1Q8NG48 757 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 CRBNQ96SW2 442 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 SRCIN1Q9C0H9 1055 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 COL15A1P39059 1388 aa9.58□□□□□ -0.88
CCDC93-207ENST00000474006 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
CCDC93-207ENST00000474006 TRIM28Q13263 835 aaKnown RBP9.57□□□□□ -0.88
CCDC93-207ENST00000474006 MVPQ14764 893 aaKnown RBP9.57□□□□□ -0.88
CCDC93-207ENST00000474006 HSP90AB3PQ58FF7 597 aa9.57□□□□□ -0.88
CCDC93-207ENST00000474006 MAMSTRQ6ZN01 415 aa9.57□□□□□ -0.88
CCDC93-207ENST00000474006 ITPRIPQ8IWB1 547 aa9.57□□□□□ -0.88
CCDC93-207ENST00000474006 PARP9Q8IXQ6 854 aa9.57□□□□□ -0.88
CCDC93-207ENST00000474006 ZNF34Q8IZ26 560 aa9.57□□□□□ -0.88
CCDC93-207ENST00000474006 ISCA1Q9BUE6 129 aa9.57□□□□□ -0.88
CCDC93-207ENST00000474006 PNPLA7Q6ZV29 1317 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
CCDC93-207ENST00000474006 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 RIMBP2O15034 1052 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 ALDH1L1O75891 902 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 GYS1P13807 737 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 GPTP24298 496 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 GCKRQ14397 625 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 TSR1Q2NL82 804 aaKnown RBP9.56□□□□□ -0.88
CCDC93-207ENST00000474006 BICDL1Q6ZP65 573 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 CCDC191Q8NCU4 936 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 IL27Q8NEV9 243 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 EXOC6Q8TAG9 804 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 USP44Q9H0E7 712 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 SCUBE2Q9NQ36 999 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 ZNF652Q9Y2D9 606 aa9.56□□□□□ -0.88
CCDC93-207ENST00000474006 C5P01031 1676 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 VIRMAQ69YN4 1812 aaKnown RBP9.55□□□□□ -0.88
CCDC93-207ENST00000474006 NEFLP07196 543 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 TM4SF1P30408 202 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 NLRP10Q86W26 655 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 NLGN1Q8N2Q7 840 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 JARID2Q92833 1246 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-207ENST00000474006 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 SETDB2Q96T68 719 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 PDGFDQ9GZP0 370 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-207ENST00000474006 CWC25Q9NXE8 425 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-207ENST00000474006 C9orf78Q9NZ63 289 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-207ENST00000474006 NIP7Q9Y221 180 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC93-207ENST00000474006 TJP1Q07157 1748 aa9.55□□□□□ -0.88
CCDC93-207ENST00000474006 H7C1W4 665 aa9.54□□□□□ -0.88
CCDC93-207ENST00000474006 NFIXQ14938 502 aa9.54□□□□□ -0.88
CCDC93-207ENST00000474006 R3HDM1Q15032 1099 aaKnown RBP9.54□□□□□ -0.88
CCDC93-207ENST00000474006 SUSD4Q5VX71 490 aa9.54□□□□□ -0.88
CCDC93-207ENST00000474006 ZDHHC16Q969W1 377 aa9.54□□□□□ -0.88
CCDC93-207ENST00000474006 TRMT112Q9UI30 125 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms