RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
CLIC3-201ENST00000473911 PHAXQ9H814 394 aaKnown RBP20.1■□□□□ 0.81
CLIC3-201ENST00000473911 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
CLIC3-201ENST00000473911 GPC2Q8N158 579 aa20.09■□□□□ 0.81
CLIC3-201ENST00000473911 FAM89AQ96GI7 184 aa20.09■□□□□ 0.81
CLIC3-201ENST00000473911 EPS15P42566 896 aa20.08■□□□□ 0.81
CLIC3-201ENST00000473911 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
CLIC3-201ENST00000473911 BBOX1O75936 387 aa20.07■□□□□ 0.8
CLIC3-201ENST00000473911 DDX58O95786 925 aaKnown RBP20.07■□□□□ 0.8
CLIC3-201ENST00000473911 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
CLIC3-201ENST00000473911 LARGE2Q8N3Y3 721 aa20.07■□□□□ 0.8
CLIC3-201ENST00000473911 TSPYL6Q8N831 410 aa20.07■□□□□ 0.8
CLIC3-201ENST00000473911 SALL2Q9Y467 1007 aaPredicted RBP20.07■□□□□ 0.8
CLIC3-201ENST00000473911 ANKRD36CQ5JPF3 1778 aa20.07■□□□□ 0.8
CLIC3-201ENST00000473911 SCNN1DP51172 638 aa20.06■□□□□ 0.8
CLIC3-201ENST00000473911 GRAPQ13588 217 aa20.06■□□□□ 0.8
CLIC3-201ENST00000473911 GRAPLQ8TC17 118 aaPredicted RBP20.06■□□□□ 0.8
CLIC3-201ENST00000473911 MYD88Q99836 296 aa20.06■□□□□ 0.8
CLIC3-201ENST00000473911 IL16Q14005 1332 aa20.05■□□□□ 0.8
CLIC3-201ENST00000473911 EIF6P56537 245 aaKnown RBP20.05■□□□□ 0.8
CLIC3-201ENST00000473911 TRIM28Q13263 835 aaKnown RBP20.05■□□□□ 0.8
CLIC3-201ENST00000473911 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
CLIC3-201ENST00000473911 PNMA8AQ86V59 439 aaPredicted RBP20.05■□□□□ 0.8
CLIC3-201ENST00000473911 STK31Q9BXU1 1019 aa20.05■□□□□ 0.8
CLIC3-201ENST00000473911 IRS4O14654 1257 aaPredicted RBP20.04■□□□□ 0.8
CLIC3-201ENST00000473911 PPIP5K2O43314 1243 aa20.04■□□□□ 0.8
CLIC3-201ENST00000473911 TWISTNBQ3B726 338 aaPredicted RBP20.04■□□□□ 0.8
CLIC3-201ENST00000473911 DPP8Q6V1X1 898 aaPredicted RBP20.04■□□□□ 0.8
CLIC3-201ENST00000473911 SP8Q8IXZ3 490 aa20.04■□□□□ 0.8
CLIC3-201ENST00000473911 SUPT20HQ8NEM7 779 aa20.04■□□□□ 0.8
CLIC3-201ENST00000473911 WBP1LQ9NX94 342 aa20.04■□□□□ 0.8
CLIC3-201ENST00000473911 LAMB2P55268 1798 aa20.03■□□□□ 0.8
CLIC3-201ENST00000473911 TAF1P21675 1872 aa20.03■□□□□ 0.8
CLIC3-201ENST00000473911 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
CLIC3-201ENST00000473911 AOC3Q16853 763 aa20.03■□□□□ 0.8
CLIC3-201ENST00000473911 DEFB115Q30KQ5 88 aa20.03■□□□□ 0.8
CLIC3-201ENST00000473911 NIM1KQ8IY84 436 aa20.03■□□□□ 0.8
CLIC3-201ENST00000473911 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
CLIC3-201ENST00000473911 TRAF5O00463 557 aa20.02■□□□□ 0.8
CLIC3-201ENST00000473911 HSP90B1P14625 803 aaKnown RBP20.02■□□□□ 0.8
CLIC3-201ENST00000473911 LBX1P52954 281 aa20.02■□□□□ 0.8
CLIC3-201ENST00000473911 MPNDQ8N594 471 aa20.02■□□□□ 0.8
CLIC3-201ENST00000473911 ZBTB38Q8NAP3 1195 aaPredicted RBP20.02■□□□□ 0.8
CLIC3-201ENST00000473911 SF3B3Q15393 1217 aaKnown RBP20.01■□□□□ 0.79
CLIC3-201ENST00000473911 TMC4Q7Z404 712 aa20.01■□□□□ 0.79
CLIC3-201ENST00000473911 CCDC191Q8NCU4 936 aa20.01■□□□□ 0.79
CLIC3-201ENST00000473911 METTL22Q9BUU2 404 aaPredicted RBP20.01■□□□□ 0.79
CLIC3-201ENST00000473911 VPS33BQ9H267 617 aa20.01■□□□□ 0.79
CLIC3-201ENST00000473911 CWC25Q9NXE8 425 aaPredicted RBP20.01■□□□□ 0.79
CLIC3-201ENST00000473911 MAP3K2Q9Y2U5 619 aa20.01■□□□□ 0.79
CLIC3-201ENST00000473911 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
CLIC3-201ENST00000473911 CTCFP49711 727 aaPredicted RBP20■□□□□ 0.79
CLIC3-201ENST00000473911 CST9Q5W186 159 aa20■□□□□ 0.79
CLIC3-201ENST00000473911 WDR63Q8IWG1 891 aa20■□□□□ 0.79
CLIC3-201ENST00000473911 RTFDC1Q9BY42 306 aaPredicted RBP20■□□□□ 0.79
CLIC3-201ENST00000473911 PRDM10Q9NQV6 1147 aa20■□□□□ 0.79
CLIC3-201ENST00000473911 ABT1Q9ULW3 272 aaKnown RBP20■□□□□ 0.79
CLIC3-201ENST00000473911 LMOD1P29536 600 aaPredicted RBP19.99■□□□□ 0.79
CLIC3-201ENST00000473911 KSR2Q6VAB6 950 aa19.99■□□□□ 0.79
CLIC3-201ENST00000473911 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
CLIC3-201ENST00000473911 PI4KAP2A4QPH2 592 aa19.98■□□□□ 0.79
CLIC3-201ENST00000473911 SLC4A2P04920 1241 aa19.98■□□□□ 0.79
CLIC3-201ENST00000473911 HSPA8P11142 646 aaKnown RBP19.98■□□□□ 0.79
CLIC3-201ENST00000473911 CXCL9Q07325 125 aa19.98■□□□□ 0.79
CLIC3-201ENST00000473911 PI4KAP1Q8N8J0 262 aa19.98■□□□□ 0.79
CLIC3-201ENST00000473911 CELF1Q92879 486 aaKnown RBP19.98■□□□□ 0.79
CLIC3-201ENST00000473911 AIDAQ96BJ3 306 aa19.98■□□□□ 0.79
CLIC3-201ENST00000473911 PCCAP05165 728 aaPredicted RBP19.97■□□□□ 0.79
CLIC3-201ENST00000473911 NEXNQ0ZGT2 675 aa19.97■□□□□ 0.79
CLIC3-201ENST00000473911 JARID2Q92833 1246 aaPredicted RBP19.97■□□□□ 0.79
CLIC3-201ENST00000473911 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
CLIC3-201ENST00000473911 CYP4F22Q6NT55 531 aa19.96■□□□□ 0.79
CLIC3-201ENST00000473911 GPRC5DQ9NZD1 345 aa19.96■□□□□ 0.79
CLIC3-201ENST00000473911 ZNRF3Q9ULT6 936 aa19.96■□□□□ 0.79
CLIC3-201ENST00000473911 COL4A1P02462 1669 aa19.96■□□□□ 0.79
CLIC3-201ENST00000473911 SHTN1A0MZ66 631 aa19.95■□□□□ 0.78
CLIC3-201ENST00000473911 PDE8AO60658 829 aa19.95■□□□□ 0.78
CLIC3-201ENST00000473911 KIAA2012Q0VF49 1180 aa19.95■□□□□ 0.78
CLIC3-201ENST00000473911 CCDC152Q4G0S7 254 aa19.95■□□□□ 0.78
CLIC3-201ENST00000473911 USP50Q70EL3 339 aaPredicted RBP19.95■□□□□ 0.78
CLIC3-201ENST00000473911 G2E3Q7L622 706 aa19.95■□□□□ 0.78
CLIC3-201ENST00000473911 NSFL1CQ9UNZ2 370 aaKnown RBP19.95■□□□□ 0.78
CLIC3-201ENST00000473911 DDX60Q8IY21 1712 aaKnown RBP19.94■□□□□ 0.78
CLIC3-201ENST00000473911 GMPSP49915 693 aaPredicted RBP19.94■□□□□ 0.78
CLIC3-201ENST00000473911 RPS8P62241 208 aaKnown RBP19.94■□□□□ 0.78
CLIC3-201ENST00000473911 EXOSC9Q06265 439 aaKnown RBP19.94■□□□□ 0.78
CLIC3-201ENST00000473911 GRM1Q13255 1194 aa19.94■□□□□ 0.78
CLIC3-201ENST00000473911 CAPNS2Q96L46 248 aa19.94■□□□□ 0.78
CLIC3-201ENST00000473911 YDJCA8MPS7 323 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 C6orf229H3BNL8 230 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 RAD17O75943 681 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 IGKV5-2P06315 115 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 HIRAP54198 1017 aaPredicted RBP19.93■□□□□ 0.78
CLIC3-201ENST00000473911 FLIIQ13045 1269 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 CCDC85AQ96PX6 553 aaPredicted RBP19.93■□□□□ 0.78
CLIC3-201ENST00000473911 MYH16Q9H6N6 1097 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 SEC31BQ9NQW1 1179 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 THSD7BQ9C0I4 1608 aa19.93■□□□□ 0.78
CLIC3-201ENST00000473911 DUOX1Q9NRD9 1551 aa19.92■□□□□ 0.78
CLIC3-201ENST00000473911 AOC2O75106 756 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms