RNA–Protein interactions for RNA: ENST00000473657.1

PHACTR3-207, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2

Gene PHACTR3, Length 2,408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-207ENST00000473657 FSD1Q9BTV5 496 aa10.84□□□□□ -0.67
PHACTR3-207ENST00000473657 UPF3BQ9BZI7 483 aaKnown RBP10.84□□□□□ -0.67
PHACTR3-207ENST00000473657 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
PHACTR3-207ENST00000473657 PTMSP20962 102 aa10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 LRRC24Q50LG9 513 aa10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 COL5A3P25940 1745 aaPredicted RBP10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 KAT6BQ8WYB5 2073 aa10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 PALLDQ8WX93 1383 aa10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 TRAK2O60296 914 aa10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 EIF5P55010 431 aaKnown RBP10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 SYTL4Q96C24 671 aaPredicted RBP10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 ZNF330Q9Y3S2 320 aaPredicted RBP10.83□□□□□ -0.68
PHACTR3-207ENST00000473657 LRP5O75197 1615 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 INTS5Q6P9B9 1019 aaKnown RBP10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 FAM89AQ96GI7 184 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 RPAP1Q9BWH6 1393 aaPredicted RBP10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 BCL9LQ86UU0 1499 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 CCDC57Q2TAC2 916 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 USPL1Q5W0Q7 1092 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 ZNF34Q8IZ26 560 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 EDC3Q96F86 508 aaKnown RBP10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 ZSWIM6Q9HCJ5 1215 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 RBM8AQ9Y5S9 174 aaKnown RBP10.82□□□□□ -0.68
PHACTR3-207ENST00000473657 MYH14Q7Z406 1995 aaKnown RBP10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 BAG4O95429 457 aaKnown RBP10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 PKP1Q13835 747 aa10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 TSGA10IPQ3SY00 556 aa10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 PRPF40BQ6NWY9 871 aaKnown RBP10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 KBTBD3Q8NAB2 608 aa10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 PUS3Q9BZE2 481 aaKnown RBP10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 RIC1Q4ADV7 1423 aa10.81□□□□□ -0.68
PHACTR3-207ENST00000473657 A0A1B0GUL7 405 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 NUTM2BA6NNL0 878 aaPredicted RBP10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 NUTM2EB1AL46 878 aaPredicted RBP10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 TAF5LO75529 589 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 VPS53Q5VIR6 699 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 CREB3L3Q68CJ9 461 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 DZIP3Q86Y13 1208 aaKnown RBP10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 NUTM2AQ8IVF1 878 aaPredicted RBP10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 TTLL11Q8NHH1 800 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 CCDC87Q9NVE4 849 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 UBN2Q6ZU65 1347 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 SH3TC1Q8TE82 1336 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 LAMB2P55268 1798 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 BCORQ6W2J9 1755 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 LOC102724428A0A0B4J2F2 783 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 AK2P54819 239 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 SIK1P57059 783 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 TIMM10P62072 90 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 PIP4K2BP78356 416 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 ZNF589Q86UQ0 364 aaPredicted RBP10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 AK7Q96M32 723 aa10.8□□□□□ -0.68
PHACTR3-207ENST00000473657 SLC27A2O14975 620 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 CTSWP56202 376 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 IFIT5Q13325 482 aaKnown RBP10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 VPS72Q15906 364 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 ADCK5Q3MIX3 580 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 RUFY3Q7L099 469 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 HMG20BQ9P0W2 317 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 CEP126Q9P2H0 1117 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 AKAP2Q9Y2D5 859 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 ABCC12Q96J65 1359 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 BRD1O95696 1058 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 ZKSCAN1P17029 563 aaPredicted RBP10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 CASTP20810 708 aaKnown RBP10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 GPTP24298 496 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 CRKLP46109 303 aaKnown RBP10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 ITPK1Q13572 414 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 SYNE4Q8N205 404 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 NEUROD6Q96NK8 337 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 DNAJC2Q99543 621 aaKnown RBP10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 ALDH8A1Q9H2A2 487 aaPredicted RBP10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 PAG1Q9NWQ8 432 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 LIMCH1Q9UPQ0 1083 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 RIPOR2Q9Y4F9 1068 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 THSD7AQ9UPZ6 1657 aa10.79□□□□□ -0.68
PHACTR3-207ENST00000473657 DDX60Q8IY21 1712 aaKnown RBP10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 IRS4O14654 1257 aaPredicted RBP10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 ATP6V1AP38606 617 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 SMARCC1Q92922 1105 aaPredicted RBP10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 JAKMIP1Q96N16 626 aaKnown RBP10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 TBC1D2BQ9UPU7 963 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 NDUFB9Q9Y6M9 179 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 ARAP2Q8WZ64 1704 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 PDE8AO60658 829 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 MCMDC2Q4G0Z9 681 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 RNF20Q5VTR2 975 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 DDX46Q7L014 1031 aaKnown RBP10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 FNBP4Q8N3X1 1017 aaPredicted RBP10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 ACSBG1Q96GR2 724 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 GREM2Q9H772 168 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 CYP46A1Q9Y6A2 500 aa10.78□□□□□ -0.68
PHACTR3-207ENST00000473657 GOLGA6L22H0YM25 854 aa10.77□□□□□ -0.68
PHACTR3-207ENST00000473657 CAMTA2O94983 1202 aa10.77□□□□□ -0.68
PHACTR3-207ENST00000473657 ITGA6P23229 1130 aa10.77□□□□□ -0.68
PHACTR3-207ENST00000473657 VGLL2Q8N8G2 317 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms