RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 RAB11FIP3O75154 756 aa18.21■□□□□ 0.51
LMNA-213ENST00000473598 ZPR1O75312 459 aa18.21■□□□□ 0.51
LMNA-213ENST00000473598 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
LMNA-213ENST00000473598 PLA2G12BQ9BX93 195 aa18.21■□□□□ 0.51
LMNA-213ENST00000473598 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
LMNA-213ENST00000473598 NIP7Q9Y221 180 aaKnown RBP eCLIP18.21■□□□□ 0.51
LMNA-213ENST00000473598 HSP90AB4PQ58FF6 505 aa18.2■□□□□ 0.5
LMNA-213ENST00000473598 SUSD4Q5VX71 490 aa18.2■□□□□ 0.5
LMNA-213ENST00000473598 LMBR1LQ6UX01 489 aa18.2■□□□□ 0.5
LMNA-213ENST00000473598 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
LMNA-213ENST00000473598 USP42Q9H9J4 1324 aaKnown RBP18.2■□□□□ 0.5
LMNA-213ENST00000473598 LAMB2P55268 1798 aa18.2■□□□□ 0.5
LMNA-213ENST00000473598 DDX60Q8IY21 1712 aaKnown RBP18.19■□□□□ 0.5
LMNA-213ENST00000473598 SMARCA5O60264 1052 aaPredicted RBP18.19■□□□□ 0.5
LMNA-213ENST00000473598 GYS1P13807 737 aa18.19■□□□□ 0.5
LMNA-213ENST00000473598 SYNE4Q8N205 404 aa18.19■□□□□ 0.5
LMNA-213ENST00000473598 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
LMNA-213ENST00000473598 COL24A1Q17RW2 1714 aa18.19■□□□□ 0.5
LMNA-213ENST00000473598 HSP90AA1P07900 732 aaKnown RBP18.18■□□□□ 0.5
LMNA-213ENST00000473598 RFX5P48382 616 aaPredicted RBP18.18■□□□□ 0.5
LMNA-213ENST00000473598 UTP14AQ9BVJ6 771 aaKnown RBP18.18■□□□□ 0.5
LMNA-213ENST00000473598 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
LMNA-213ENST00000473598 IRS4O14654 1257 aaPredicted RBP18.17■□□□□ 0.5
LMNA-213ENST00000473598 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
LMNA-213ENST00000473598 SLC16A10Q8TF71 515 aa18.17■□□□□ 0.5
LMNA-213ENST00000473598 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
LMNA-213ENST00000473598 SH3TC1Q8TE82 1336 aa18.17■□□□□ 0.5
LMNA-213ENST00000473598 NTSR2O95665 410 aa18.16■□□□□ 0.5
LMNA-213ENST00000473598 PTGER2P43116 358 aa18.16■□□□□ 0.5
LMNA-213ENST00000473598 RHPN1Q8TCX5 695 aa18.16■□□□□ 0.5
LMNA-213ENST00000473598 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
LMNA-213ENST00000473598 CHMP3Q9Y3E7 222 aa18.16■□□□□ 0.5
LMNA-213ENST00000473598 CSF1RP07333 972 aa18.16■□□□□ 0.5
LMNA-213ENST00000473598 PTPN12Q05209 780 aaKnown RBP18.16■□□□□ 0.5
LMNA-213ENST00000473598 C16orf71Q8IYS4 520 aaPredicted RBP18.16■□□□□ 0.5
LMNA-213ENST00000473598 KLHDC4Q8TBB5 520 aa18.16■□□□□ 0.5
LMNA-213ENST00000473598 FAM177BA6PVY3 158 aa18.15■□□□□ 0.5
LMNA-213ENST00000473598 PDE8AO60658 829 aa18.15■□□□□ 0.5
LMNA-213ENST00000473598 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
LMNA-213ENST00000473598 ERC1Q8IUD2 1116 aa18.15■□□□□ 0.5
LMNA-213ENST00000473598 SPON1Q9HCB6 807 aa18.15■□□□□ 0.5
LMNA-213ENST00000473598 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
LMNA-213ENST00000473598 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.58e-9■■■□□ 15.6
LMNA-213ENST00000473598 PLEKHM2Q8IWE5 1019 aa18.15■□□□□ 0.5
LMNA-213ENST00000473598 SGIP1Q9BQI5 828 aa18.15■□□□□ 0.5
LMNA-213ENST00000473598 CTSWP56202 376 aa18.14■□□□□ 0.49
LMNA-213ENST00000473598 BICDL1Q6ZP65 573 aa18.14■□□□□ 0.49
LMNA-213ENST00000473598 SETDB2Q96T68 719 aa18.14■□□□□ 0.49
LMNA-213ENST00000473598 TTLL11Q8NHH1 800 aa18.13■□□□□ 0.49
LMNA-213ENST00000473598 SIL1Q9H173 461 aa18.13■□□□□ 0.49
LMNA-213ENST00000473598 OTUD7AQ8TE49 926 aaPredicted RBP18.13■□□□□ 0.49
LMNA-213ENST00000473598 IL1RAPL2Q9NP60 686 aa18.13■□□□□ 0.49
LMNA-213ENST00000473598 SASH1O94885 1247 aa18.12■□□□□ 0.49
LMNA-213ENST00000473598 MMP10P09238 476 aa18.12■□□□□ 0.49
LMNA-213ENST00000473598 HSP90B1P14625 803 aaKnown RBP18.12■□□□□ 0.49
LMNA-213ENST00000473598 CCDC57Q2TAC2 916 aa18.12■□□□□ 0.49
LMNA-213ENST00000473598 NUTM1Q86Y26 1132 aa18.12■□□□□ 0.49
LMNA-213ENST00000473598 SALL3Q9BXA9 1300 aa18.12■□□□□ 0.49
LMNA-213ENST00000473598 NLGN1Q8N2Q7 840 aa18.11■□□□□ 0.49
LMNA-213ENST00000473598 NYXQ9GZU5 481 aa18.11■□□□□ 0.49
LMNA-213ENST00000473598 RRAGDQ9NQL2 400 aaPredicted RBP18.11■□□□□ 0.49
LMNA-213ENST00000473598 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
LMNA-213ENST00000473598 DDR1Q08345 913 aa18.1■□□□□ 0.49
LMNA-213ENST00000473598 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
LMNA-213ENST00000473598 NFIXQ14938 502 aa18.1■□□□□ 0.49
LMNA-213ENST00000473598 CCDC85AQ96PX6 553 aaPredicted RBP18.1■□□□□ 0.49
LMNA-213ENST00000473598 ERFEQ4G0M1 354 aa18.1■□□□□ 0.49
LMNA-213ENST00000473598 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
LMNA-213ENST00000473598 OSBPL3Q9H4L5 887 aa18.1■□□□□ 0.49
LMNA-213ENST00000473598 GREM2Q9H772 168 aa18.1■□□□□ 0.49
LMNA-213ENST00000473598 POLD1P28340 1107 aa18.09■□□□□ 0.49
LMNA-213ENST00000473598 NBPF5PQ86XG9 351 aaPredicted RBP18.09■□□□□ 0.49
LMNA-213ENST00000473598 ZNF594Q96JF6 807 aaPredicted RBP18.09■□□□□ 0.49
LMNA-213ENST00000473598 CARMIL3Q8ND23 1372 aa18.09■□□□□ 0.49
LMNA-213ENST00000473598 ITGA6P23229 1130 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 TM4SF1P30408 202 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 PDE1AP54750 535 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 BMP2KLQ5H9B9 411 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 TPTE2Q6XPS3 522 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 FBXO3Q9UK99 471 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 LRP5O75197 1615 aa18.08■□□□□ 0.49
LMNA-213ENST00000473598 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.48
LMNA-213ENST00000473598 EYA2O00167 538 aa18.08■□□□□ 0.48
LMNA-213ENST00000473598 CIAO1O76071 339 aa18.08■□□□□ 0.48
LMNA-213ENST00000473598 MX1P20591 662 aa18.08■□□□□ 0.48
LMNA-213ENST00000473598 GTF2E1P29083 439 aaPredicted RBP18.08■□□□□ 0.48
LMNA-213ENST00000473598 RBM10P98175 930 aaKnown RBP18.08■□□□□ 0.48
LMNA-213ENST00000473598 ATG9AQ7Z3C6 839 aa18.08■□□□□ 0.48
LMNA-213ENST00000473598 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.08■□□□□ 0.48
LMNA-213ENST00000473598 L1TD1Q5T7N2 865 aaKnown RBP18.07■□□□□ 0.48
LMNA-213ENST00000473598 TTC22Q5TAA0 569 aa18.07■□□□□ 0.48
LMNA-213ENST00000473598 STAP2Q9UGK3 403 aa18.07■□□□□ 0.48
LMNA-213ENST00000473598 UTRNP46939 3433 aa18.07■□□□□ 0.48
LMNA-213ENST00000473598 POLRMTO00411 1230 aaKnown RBP18.06■□□□□ 0.48
LMNA-213ENST00000473598 IL15P40933 162 aaPredicted RBP18.06■□□□□ 0.48
LMNA-213ENST00000473598 NAP1L5Q96NT1 182 aaPredicted RBP18.06■□□□□ 0.48
LMNA-213ENST00000473598 SPEF2Q9C093 1822 aa18.06■□□□□ 0.48
LMNA-213ENST00000473598 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
LMNA-213ENST00000473598 ABCC12Q96J65 1359 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms