RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 FAM69CQ0P6D2 419 aa8.33□□□□□ -1.08
BBX-223ENST00000473542 TXNRD3Q86VQ6 643 aa8.33□□□□□ -1.08
BBX-223ENST00000473542 GAS2L2Q8NHY3 880 aa8.33□□□□□ -1.08
BBX-223ENST00000473542 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
BBX-223ENST00000473542 NGLY1Q96IV0 654 aa8.33□□□□□ -1.08
BBX-223ENST00000473542 DNAJB12Q9NXW2 375 aaKnown RBP8.33□□□□□ -1.08
BBX-223ENST00000473542 CCDC9Q9Y3X0 531 aaKnown RBP8.33□□□□□ -1.08
BBX-223ENST00000473542 M0R2N6 131 aa8.32□□□□□ -1.08
BBX-223ENST00000473542 LGR5O75473 907 aa8.32□□□□□ -1.08
BBX-223ENST00000473542 GRNP28799 593 aaKnown RBP8.32□□□□□ -1.08
BBX-223ENST00000473542 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
BBX-223ENST00000473542 KRTAP1-3Q8IUG1 177 aa8.32□□□□□ -1.08
BBX-223ENST00000473542 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
BBX-223ENST00000473542 C2orf49Q9BVC5 232 aaPredicted RBP8.32□□□□□ -1.08
BBX-223ENST00000473542 GSX2Q9BZM3 304 aa8.32□□□□□ -1.08
BBX-223ENST00000473542 GNEQ9Y223 722 aaKnown RBP8.32□□□□□ -1.08
BBX-223ENST00000473542 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
BBX-223ENST00000473542 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
BBX-223ENST00000473542 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
BBX-223ENST00000473542 DPYDQ12882 1025 aa8.31□□□□□ -1.08
BBX-223ENST00000473542 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
BBX-223ENST00000473542 DMRTC2Q8IXT2 367 aaPredicted RBP8.31□□□□□ -1.08
BBX-223ENST00000473542 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
BBX-223ENST00000473542 SCG3Q8WXD2 468 aaKnown RBP8.31□□□□□ -1.08
BBX-223ENST00000473542 TP53INP1Q96A56 240 aa8.31□□□□□ -1.08
BBX-223ENST00000473542 ATAD2Q6PL18 1390 aa8.31□□□□□ -1.08
BBX-223ENST00000473542 CARNS1A5YM72 827 aa8.3□□□□□ -1.08
BBX-223ENST00000473542 SEC13P55735 322 aa8.3□□□□□ -1.08
BBX-223ENST00000473542 RAC1P63000 192 aa8.3□□□□□ -1.08
BBX-223ENST00000473542 FMR1NBQ8N0W7 255 aaPredicted RBP8.3□□□□□ -1.08
BBX-223ENST00000473542 BCS1LQ9Y276 419 aa8.3□□□□□ -1.08
BBX-223ENST00000473542 RBM19Q9Y4C8 960 aaKnown RBP8.3□□□□□ -1.08
BBX-223ENST00000473542 NFKB1P19838 968 aa8.29□□□□□ -1.08
BBX-223ENST00000473542 SSFA2P28290 1259 aa8.29□□□□□ -1.08
BBX-223ENST00000473542 PLAURQ03405 335 aa8.29□□□□□ -1.08
BBX-223ENST00000473542 KRTAP4-12Q9BQ66 201 aa8.29□□□□□ -1.08
BBX-223ENST00000473542 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
BBX-223ENST00000473542 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
BBX-223ENST00000473542 DMGDHQ9UI17 866 aaKnown RBP8.28□□□□□ -1.08
BBX-223ENST00000473542 USP21Q9UK80 565 aa8.28□□□□□ -1.08
BBX-223ENST00000473542 HYAL3O43820 417 aaPredicted RBP8.27□□□□□ -1.09
BBX-223ENST00000473542 LRP8Q14114 963 aa8.27□□□□□ -1.09
BBX-223ENST00000473542 GRIK5Q16478 980 aa8.27□□□□□ -1.09
BBX-223ENST00000473542 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
BBX-223ENST00000473542 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
BBX-223ENST00000473542 ZBTB42B2RXF5 422 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 RGS9O75916 674 aaPredicted RBP8.26□□□□□ -1.09
BBX-223ENST00000473542 CPB1P15086 417 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 CCINQ13939 588 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 TMCO4Q5TGY1 634 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 PHLDB3Q6NSJ2 640 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 TXNDC2Q86VQ3 553 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 STAG2Q8N3U4 1231 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
BBX-223ENST00000473542 PNMA5Q96PV4 448 aa8.26□□□□□ -1.09
BBX-223ENST00000473542 ARID4AP29374 1257 aaPredicted RBP8.25□□□□□ -1.09
BBX-223ENST00000473542 FAM35AQ86V20 835 aa8.25□□□□□ -1.09
BBX-223ENST00000473542 LPIN3Q9BQK8 851 aa8.25□□□□□ -1.09
BBX-223ENST00000473542 ZFATQ9P243 1243 aa8.25□□□□□ -1.09
BBX-223ENST00000473542 TGFBR3LH3BV60 316 aa8.24□□□□□ -1.09
BBX-223ENST00000473542 ATP2B4P23634 1241 aa8.24□□□□□ -1.09
BBX-223ENST00000473542 IER5Q5VY09 327 aa8.24□□□□□ -1.09
BBX-223ENST00000473542 MSL1Q68DK7 614 aa8.24□□□□□ -1.09
BBX-223ENST00000473542 KRT25Q7Z3Z0 450 aa8.24□□□□□ -1.09
BBX-223ENST00000473542 SLAIN2Q9P270 581 aa8.24□□□□□ -1.09
BBX-223ENST00000473542 IVNS1ABPQ9Y6Y0 642 aa8.24□□□□□ -1.09
BBX-223ENST00000473542 IREB2P48200 963 aaKnown RBP8.23□□□□□ -1.09
BBX-223ENST00000473542 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
BBX-223ENST00000473542 RTN1Q16799 776 aa8.23□□□□□ -1.09
BBX-223ENST00000473542 PERM1Q5SV97 790 aa8.23□□□□□ -1.09
BBX-223ENST00000473542 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
BBX-223ENST00000473542 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
BBX-223ENST00000473542 KLK14Q9P0G3 267 aa8.23□□□□□ -1.09
BBX-223ENST00000473542 NOS3P29474 1203 aa8.22□□□□□ -1.09
BBX-223ENST00000473542 OCLNQ16625 522 aa8.22□□□□□ -1.09
BBX-223ENST00000473542 HIF1AQ16665 826 aa8.22□□□□□ -1.09
BBX-223ENST00000473542 MEGF10Q96KG7 1140 aa8.22□□□□□ -1.09
BBX-223ENST00000473542 EFCC1Q9HA90 598 aa8.22□□□□□ -1.09
BBX-223ENST00000473542 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
BBX-223ENST00000473542 TARSP26639 723 aaKnown RBP8.21□□□□□ -1.1
BBX-223ENST00000473542 INPP5BP32019 993 aa8.21□□□□□ -1.1
BBX-223ENST00000473542 IDH3AP50213 366 aa8.21□□□□□ -1.1
BBX-223ENST00000473542 SND1Q7KZF4 910 aaKnown RBP eCLIP8.21□□□□□ -1.1
BBX-223ENST00000473542 FBXO11Q86XK2 927 aa8.21□□□□□ -1.1
BBX-223ENST00000473542 IFT43Q96FT9 208 aa8.21□□□□□ -1.1
BBX-223ENST00000473542 HINFPQ9BQA5 517 aa8.21□□□□□ -1.1
BBX-223ENST00000473542 CXXC1Q9P0U4 656 aaPredicted RBP8.21□□□□□ -1.1
BBX-223ENST00000473542 DEAF1O75398 565 aaPredicted RBP8.2□□□□□ -1.1
BBX-223ENST00000473542 DHX32Q7L7V1 743 aaKnown RBP8.2□□□□□ -1.1
BBX-223ENST00000473542 WEE1P30291 646 aa8.19□□□□□ -1.1
BBX-223ENST00000473542 HFE2Q6ZVN8 426 aa8.19□□□□□ -1.1
BBX-223ENST00000473542 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
BBX-223ENST00000473542 USP20Q9Y2K6 914 aa8.19□□□□□ -1.1
BBX-223ENST00000473542 SASH3O75995 380 aa8.18□□□□□ -1.1
BBX-223ENST00000473542 MAP3K6O95382 1288 aa8.18□□□□□ -1.1
BBX-223ENST00000473542 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
BBX-223ENST00000473542 DGKZQ13574 1117 aa8.18□□□□□ -1.1
BBX-223ENST00000473542 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
BBX-223ENST00000473542 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
BBX-223ENST00000473542 QTRT2Q9H974 415 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms