RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SP8Q8IXZ3 490 aa28.89■■■□□ 2.22
PTP4A1-203ENST00000473334 LRRC37AA6NMS7 1700 aa28.89■■■□□ 2.21
PTP4A1-203ENST00000473334 POTECB2RU33 542 aa28.88■■■□□ 2.21
PTP4A1-203ENST00000473334 NEXNQ0ZGT2 675 aa28.88■■■□□ 2.21
PTP4A1-203ENST00000473334 TMC4Q7Z404 712 aa28.88■■■□□ 2.21
PTP4A1-203ENST00000473334 CCER2I3L3R5 266 aa28.87■■■□□ 2.21
PTP4A1-203ENST00000473334 FSTL1Q12841 308 aa28.87■■■□□ 2.21
PTP4A1-203ENST00000473334 JDP2Q8WYK2 163 aa28.87■■■□□ 2.21
PTP4A1-203ENST00000473334 ZNF541Q9H0D2 1346 aa28.87■■■□□ 2.21
PTP4A1-203ENST00000473334 COL4A5P29400 1685 aa28.86■■■□□ 2.21
PTP4A1-203ENST00000473334 FZD9O00144 591 aa28.86■■■□□ 2.21
PTP4A1-203ENST00000473334 IGKV5-2P06315 115 aa28.86■■■□□ 2.21
PTP4A1-203ENST00000473334 LARGE2Q8N3Y3 721 aa28.85■■■□□ 2.21
PTP4A1-203ENST00000473334 SUPT20HQ8NEM7 779 aa28.85■■■□□ 2.21
PTP4A1-203ENST00000473334 SCN4AP35499 1836 aa28.85■■■□□ 2.21
PTP4A1-203ENST00000473334 FKBP5Q13451 457 aaPredicted RBP28.84■■■□□ 2.21
PTP4A1-203ENST00000473334 DPP8Q6V1X1 898 aaPredicted RBP28.84■■■□□ 2.21
PTP4A1-203ENST00000473334 MPNDQ8N594 471 aa28.84■■■□□ 2.21
PTP4A1-203ENST00000473334 L3MBTL3Q96JM7 780 aaPredicted RBP28.84■■■□□ 2.21
PTP4A1-203ENST00000473334 RTFDC1Q9BY42 306 aaPredicted RBP28.84■■■□□ 2.21
PTP4A1-203ENST00000473334 CEP350Q5VT06 3117 aa28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 PDE8AO60658 829 aa28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 SMC1BQ8NDV3 1235 aa28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 JARID2Q92833 1246 aaPredicted RBP28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 CELF1Q92879 486 aaKnown RBP28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 VPS33BQ9H267 617 aa28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 CDHR2Q9BYE9 1310 aa28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 COL4A1P02462 1669 aa28.83■■■□□ 2.21
PTP4A1-203ENST00000473334 NEURL1BA8MQ27 555 aa28.82■■■□□ 2.2
PTP4A1-203ENST00000473334 PPIP5K2O43314 1243 aa28.82■■■□□ 2.2
PTP4A1-203ENST00000473334 CWF19L2Q2TBE0 894 aaKnown RBP28.82■■■□□ 2.2
PTP4A1-203ENST00000473334 IQCA1LA6NCM1 817 aa28.81■■■□□ 2.2
PTP4A1-203ENST00000473334 MYH3P11055 1940 aa28.81■■■□□ 2.2
PTP4A1-203ENST00000473334 EIF6P56537 245 aaKnown RBP28.8■■■□□ 2.2
PTP4A1-203ENST00000473334 AOC3Q16853 763 aa28.8■■■□□ 2.2
PTP4A1-203ENST00000473334 CCDC152Q4G0S7 254 aa28.8■■■□□ 2.2
PTP4A1-203ENST00000473334 NIM1KQ8IY84 436 aa28.8■■■□□ 2.2
PTP4A1-203ENST00000473334 DNAAF4Q8WXU2 420 aa28.8■■■□□ 2.2
PTP4A1-203ENST00000473334 DUOX1Q9NRD9 1551 aa28.79■■■□□ 2.2
PTP4A1-203ENST00000473334 APLP1P51693 650 aa28.79■■■□□ 2.2
PTP4A1-203ENST00000473334 GPC2Q8N158 579 aa28.79■■■□□ 2.2
PTP4A1-203ENST00000473334 RPS8P62241 208 aaKnown RBP28.78■■■□□ 2.2
PTP4A1-203ENST00000473334 E9PSI1 815 aa28.77■■■□□ 2.2
PTP4A1-203ENST00000473334 SEC31BQ9NQW1 1179 aa28.77■■■□□ 2.2
PTP4A1-203ENST00000473334 LTBP1Q14766 1721 aa28.75■■■□□ 2.19
PTP4A1-203ENST00000473334 CTSWP56202 376 aa28.75■■■□□ 2.19
PTP4A1-203ENST00000473334 KIAA2012Q0VF49 1180 aa28.75■■■□□ 2.19
PTP4A1-203ENST00000473334 GCKRQ14397 625 aa28.75■■■□□ 2.19
PTP4A1-203ENST00000473334 LINS1Q8NG48 757 aa28.75■■■□□ 2.19
PTP4A1-203ENST00000473334 TAF1DQ9H5J8 278 aaPredicted RBP28.75■■■□□ 2.19
PTP4A1-203ENST00000473334 H7C1W4 665 aa28.74■■■□□ 2.19
PTP4A1-203ENST00000473334 UBE3BQ7Z3V4 1068 aa28.74■■■□□ 2.19
PTP4A1-203ENST00000473334 CCDC85AQ96PX6 553 aaPredicted RBP28.74■■■□□ 2.19
PTP4A1-203ENST00000473334 HACL1Q9UJ83 578 aa28.74■■■□□ 2.19
PTP4A1-203ENST00000473334 GJA3Q9Y6H8 435 aa28.74■■■□□ 2.19
PTP4A1-203ENST00000473334 NSFL1CQ9UNZ2 370 aaKnown RBP28.73■■■□□ 2.19
PTP4A1-203ENST00000473334 SLFN5Q08AF3 891 aa28.72■■■□□ 2.19
PTP4A1-203ENST00000473334 ZNRF3Q9ULT6 936 aa28.72■■■□□ 2.19
PTP4A1-203ENST00000473334 F6X3S4 739 aa28.71■■■□□ 2.19
PTP4A1-203ENST00000473334 GPSM2P81274 684 aa28.71■■■□□ 2.19
PTP4A1-203ENST00000473334 TTLL11Q8NHH1 800 aa28.71■■■□□ 2.19
PTP4A1-203ENST00000473334 POTEIP0CG38 1075 aa28.7■■■□□ 2.18
PTP4A1-203ENST00000473334 POTEJP0CG39 1038 aa28.7■■■□□ 2.18
PTP4A1-203ENST00000473334 CHADLQ6NUI6 762 aa28.7■■■□□ 2.18
PTP4A1-203ENST00000473334 ANKRD18AQ8IVF6 992 aa28.7■■■□□ 2.18
PTP4A1-203ENST00000473334 EPHX2P34913 555 aa28.69■■■□□ 2.18
PTP4A1-203ENST00000473334 CASP7P55210 303 aa28.69■■■□□ 2.18
PTP4A1-203ENST00000473334 LDHDQ86WU2 507 aa28.69■■■□□ 2.18
PTP4A1-203ENST00000473334 CDC5LQ99459 802 aaKnown RBP28.69■■■□□ 2.18
PTP4A1-203ENST00000473334 PLA2G12BQ9BX93 195 aa28.69■■■□□ 2.18
PTP4A1-203ENST00000473334 RTL9Q8NET4 1388 aa28.69■■■□□ 2.18
PTP4A1-203ENST00000473334 SPEF2Q9C093 1822 aa28.69■■■□□ 2.18
PTP4A1-203ENST00000473334 C6orf229H3BNL8 230 aa28.68■■■□□ 2.18
PTP4A1-203ENST00000473334 WASHC4Q2M389 1173 aa28.68■■■□□ 2.18
PTP4A1-203ENST00000473334 BEND3Q5T5X7 828 aa28.68■■■□□ 2.18
PTP4A1-203ENST00000473334 POLLQ9UGP5 575 aa28.68■■■□□ 2.18
PTP4A1-203ENST00000473334 ADAMTSL1Q8N6G6 1762 aa28.67■■■□□ 2.18
PTP4A1-203ENST00000473334 LMOD1P29536 600 aaPredicted RBP28.67■■■□□ 2.18
PTP4A1-203ENST00000473334 CXCL9Q07325 125 aa28.67■■■□□ 2.18
PTP4A1-203ENST00000473334 EYA3Q99504 573 aa28.67■■■□□ 2.18
PTP4A1-203ENST00000473334 GREM2Q9H772 168 aa28.67■■■□□ 2.18
PTP4A1-203ENST00000473334 PODXL2Q9NZ53 605 aa28.67■■■□□ 2.18
PTP4A1-203ENST00000473334 SCNN1DP51172 638 aa28.66■■■□□ 2.18
PTP4A1-203ENST00000473334 EAPPQ56P03 285 aaPredicted RBP28.66■■■□□ 2.18
PTP4A1-203ENST00000473334 PNMA8AQ86V59 439 aaPredicted RBP28.66■■■□□ 2.18
PTP4A1-203ENST00000473334 TBC1D16Q8TBP0 767 aa28.66■■■□□ 2.18
PTP4A1-203ENST00000473334 CDCA7LQ96GN5 454 aa28.65■■■□□ 2.18
PTP4A1-203ENST00000473334 ANKIB1Q9P2G1 1089 aa28.65■■■□□ 2.18
PTP4A1-203ENST00000473334 DIEXFQ68CQ4 756 aaKnown RBP28.64■■■□□ 2.18
PTP4A1-203ENST00000473334 CIAPIN1Q6FI81 312 aa28.64■■■□□ 2.18
PTP4A1-203ENST00000473334 RIMBP2O15034 1052 aa28.63■■■□□ 2.17
PTP4A1-203ENST00000473334 MRPL50Q8N5N7 158 aaKnown RBP28.63■■■□□ 2.17
PTP4A1-203ENST00000473334 GGA1Q9UJY5 639 aa28.63■■■□□ 2.17
PTP4A1-203ENST00000473334 YDJCA8MPS7 323 aa28.62■■■□□ 2.17
PTP4A1-203ENST00000473334 RAD17O75943 681 aa28.62■■■□□ 2.17
PTP4A1-203ENST00000473334 UFL1O94874 794 aa28.62■■■□□ 2.17
PTP4A1-203ENST00000473334 HTRA3P83110 453 aa28.62■■■□□ 2.17
PTP4A1-203ENST00000473334 TNIP1Q15025 636 aa28.62■■■□□ 2.17
PTP4A1-203ENST00000473334 TRMT2AQ8IZ69 625 aaKnown RBP28.62■■■□□ 2.17
PTP4A1-203ENST00000473334 XDHP47989 1333 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms