RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 SUCLG2Q96I99 432 aa22.31■■□□□ 1.16
NR1H3-218ENST00000473222 PIM2Q9P1W9 311 aa22.31■■□□□ 1.16
NR1H3-218ENST00000473222 TNRC6CQ9HCJ0 1690 aaKnown RBP22.3■■□□□ 1.16
NR1H3-218ENST00000473222 EPHA10Q5JZY3 1008 aa22.3■■□□□ 1.16
NR1H3-218ENST00000473222 CRAMP1Q96RY5 1269 aa22.3■■□□□ 1.16
NR1H3-218ENST00000473222 COG6Q9Y2V7 657 aa22.3■■□□□ 1.16
NR1H3-218ENST00000473222 ALDH1B1P30837 517 aa22.29■■□□□ 1.16
NR1H3-218ENST00000473222 CTSWP56202 376 aa22.29■■□□□ 1.16
NR1H3-218ENST00000473222 ZNF622Q969S3 477 aaKnown RBP eCLIP22.29■■□□□ 1.16
NR1H3-218ENST00000473222 RBM17Q96I25 401 aaKnown RBP22.29■■□□□ 1.16
NR1H3-218ENST00000473222 DDX19BQ9UMR2 479 aa22.29■■□□□ 1.16
NR1H3-218ENST00000473222 RABL6Q3YEC7 729 aaPredicted RBP22.28■■□□□ 1.16
NR1H3-218ENST00000473222 CCDC152Q4G0S7 254 aa22.28■■□□□ 1.16
NR1H3-218ENST00000473222 RPGRQ92834 1020 aaKnown RBP22.28■■□□□ 1.16
NR1H3-218ENST00000473222 CNKSR1Q969H4 720 aa22.28■■□□□ 1.16
NR1H3-218ENST00000473222 DLEC1Q9Y238 1755 aa22.27■■□□□ 1.16
NR1H3-218ENST00000473222 BRCA1P38398 1863 aaKnown RBP22.27■■□□□ 1.16
NR1H3-218ENST00000473222 LMBR1LQ6UX01 489 aa22.27■■□□□ 1.16
NR1H3-218ENST00000473222 DDX46Q7L014 1031 aaKnown RBP22.27■■□□□ 1.16
NR1H3-218ENST00000473222 TTLL6Q8N841 843 aa22.27■■□□□ 1.16
NR1H3-218ENST00000473222 COL11A2P13942 1736 aaPredicted RBP22.26■■□□□ 1.15
NR1H3-218ENST00000473222 CENPBP07199 599 aaPredicted RBP22.26■■□□□ 1.15
NR1H3-218ENST00000473222 CHMP4BQ9H444 224 aaKnown RBP22.26■■□□□ 1.15
NR1H3-218ENST00000473222 BICC1Q9H694 974 aaKnown RBP22.26■■□□□ 1.15
NR1H3-218ENST00000473222 RTL9Q8NET4 1388 aa22.25■■□□□ 1.15
NR1H3-218ENST00000473222 BBOX1O75936 387 aa22.25■■□□□ 1.15
NR1H3-218ENST00000473222 GNAI2P04899 355 aa22.25■■□□□ 1.15
NR1H3-218ENST00000473222 ANKRD44Q8N8A2 993 aa22.25■■□□□ 1.15
NR1H3-218ENST00000473222 LRRFIP2Q9Y608 721 aaKnown RBP22.25■■□□□ 1.15
NR1H3-218ENST00000473222 TAF1P21675 1872 aa22.25■■□□□ 1.15
NR1H3-218ENST00000473222 DALRD3Q5D0E6 543 aaKnown RBP22.24■■□□□ 1.15
NR1H3-218ENST00000473222 GREM2Q9H772 168 aa22.24■■□□□ 1.15
NR1H3-218ENST00000473222 SEC31BQ9NQW1 1179 aa22.24■■□□□ 1.15
NR1H3-218ENST00000473222 ZBTB40Q9NUA8 1239 aa22.24■■□□□ 1.15
NR1H3-218ENST00000473222 SLX4Q8IY92 1834 aa22.24■■□□□ 1.15
NR1H3-218ENST00000473222 GRAPQ13588 217 aa22.23■■□□□ 1.15
NR1H3-218ENST00000473222 GRAPLQ8TC17 118 aaPredicted RBP22.23■■□□□ 1.15
NR1H3-218ENST00000473222 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
NR1H3-218ENST00000473222 RPS8P62241 208 aaKnown RBP22.22■■□□□ 1.15
NR1H3-218ENST00000473222 C7orf43Q8WVR3 580 aa22.22■■□□□ 1.15
NR1H3-218ENST00000473222 ITGA6P23229 1130 aa22.21■■□□□ 1.15
NR1H3-218ENST00000473222 PRPF40BQ6NWY9 871 aaKnown RBP22.21■■□□□ 1.15
NR1H3-218ENST00000473222 CELF1Q92879 486 aaKnown RBP22.21■■□□□ 1.15
NR1H3-218ENST00000473222 ANKRD18BA2A2Z9 1011 aa22.2■■□□□ 1.14
NR1H3-218ENST00000473222 IFIT5Q13325 482 aaKnown RBP22.2■■□□□ 1.14
NR1H3-218ENST00000473222 MTX1Q13505 466 aa22.2■■□□□ 1.14
NR1H3-218ENST00000473222 FAM161AQ3B820 660 aa22.2■■□□□ 1.14
NR1H3-218ENST00000473222 BCS1LQ9Y276 419 aa22.2■■□□□ 1.14
NR1H3-218ENST00000473222 CCDC57Q2TAC2 916 aa22.19■■□□□ 1.14
NR1H3-218ENST00000473222 TMC4Q7Z404 712 aa22.19■■□□□ 1.14
NR1H3-218ENST00000473222 CDC5LQ99459 802 aaKnown RBP22.19■■□□□ 1.14
NR1H3-218ENST00000473222 CHMP3Q9Y3E7 222 aa22.19■■□□□ 1.14
NR1H3-218ENST00000473222 CACNA1SQ13698 1873 aa22.18■■□□□ 1.14
NR1H3-218ENST00000473222 ATP8B2P98198 1209 aa22.18■■□□□ 1.14
NR1H3-218ENST00000473222 ANKRD18AQ8IVF6 992 aa22.18■■□□□ 1.14
NR1H3-218ENST00000473222 SP8Q8IXZ3 490 aa22.18■■□□□ 1.14
NR1H3-218ENST00000473222 CRBNQ96SW2 442 aa22.18■■□□□ 1.14
NR1H3-218ENST00000473222 WWC3Q9ULE0 1092 aa22.18■■□□□ 1.14
NR1H3-218ENST00000473222 ARFGEF1Q9Y6D6 1849 aa22.17■■□□□ 1.14
NR1H3-218ENST00000473222 BSDC1Q9NW68 430 aaPredicted RBP22.17■■□□□ 1.14
NR1H3-218ENST00000473222 ATP6V0A2Q9Y487 856 aa22.17■■□□□ 1.14
NR1H3-218ENST00000473222 C21orf2O43822 256 aa22.16■■□□□ 1.14
NR1H3-218ENST00000473222 YBX3P16989 372 aaKnown RBP eCLIP22.16■■□□□ 1.14
NR1H3-218ENST00000473222 RFX5P48382 616 aaPredicted RBP22.16■■□□□ 1.14
NR1H3-218ENST00000473222 CC2D2BQ6DHV5 1058 aa22.16■■□□□ 1.14
NR1H3-218ENST00000473222 C1orf115Q9H7X2 142 aa22.16■■□□□ 1.14
NR1H3-218ENST00000473222 PPEF1O14829 653 aaPredicted RBP22.15■■□□□ 1.14
NR1H3-218ENST00000473222 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
NR1H3-218ENST00000473222 GPR162Q16538 588 aa22.15■■□□□ 1.14
NR1H3-218ENST00000473222 COL4A1P02462 1669 aa22.14■■□□□ 1.14
NR1H3-218ENST00000473222 AAMPQ13685 434 aa22.14■■□□□ 1.13
NR1H3-218ENST00000473222 GRIPAP1Q4V328 841 aa22.14■■□□□ 1.13
NR1H3-218ENST00000473222 SOGA3Q5TF21 947 aa22.14■■□□□ 1.13
NR1H3-218ENST00000473222 RPAP2Q8IXW5 612 aaPredicted RBP22.14■■□□□ 1.13
NR1H3-218ENST00000473222 ZNF594Q96JF6 807 aaPredicted RBP22.14■■□□□ 1.13
NR1H3-218ENST00000473222 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.13
NR1H3-218ENST00000473222 PNMA6EA0A0J9YXQ4 647 aa22.13■■□□□ 1.13
NR1H3-218ENST00000473222 SRGAP3O43295 1099 aa22.13■■□□□ 1.13
NR1H3-218ENST00000473222 PTPN12Q05209 780 aaKnown RBP22.13■■□□□ 1.13
NR1H3-218ENST00000473222 CEP85Q6P2H3 762 aa22.13■■□□□ 1.13
NR1H3-218ENST00000473222 MPHOSPH8Q99549 860 aa22.13■■□□□ 1.13
NR1H3-218ENST00000473222 GRIN3BO60391 1043 aa22.12■■□□□ 1.13
NR1H3-218ENST00000473222 POLA2Q14181 598 aa22.12■■□□□ 1.13
NR1H3-218ENST00000473222 TAF7LQ5H9L4 462 aa22.12■■□□□ 1.13
NR1H3-218ENST00000473222 LDHAL6AQ6ZMR3 332 aa22.12■■□□□ 1.13
NR1H3-218ENST00000473222 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
NR1H3-218ENST00000473222 SSH3Q8TE77 659 aa22.12■■□□□ 1.13
NR1H3-218ENST00000473222 ZNF219Q9P2Y4 722 aaPredicted RBP22.12■■□□□ 1.13
NR1H3-218ENST00000473222 MINPP1Q9UNW1 487 aa22.12■■□□□ 1.13
NR1H3-218ENST00000473222 OLFM4Q6UX06 510 aa22.11■■□□□ 1.13
NR1H3-218ENST00000473222 RTKN2Q8IZC4 609 aa22.11■■□□□ 1.13
NR1H3-218ENST00000473222 TMX4Q9H1E5 349 aaPredicted RBP22.11■■□□□ 1.13
NR1H3-218ENST00000473222 COPRSQ9NQ92 184 aa22.11■■□□□ 1.13
NR1H3-218ENST00000473222 FBXO3Q9UK99 471 aa22.11■■□□□ 1.13
NR1H3-218ENST00000473222 DCAF8L1A6NGE4 600 aa22.1■■□□□ 1.13
NR1H3-218ENST00000473222 CCDC93Q567U6 631 aa22.1■■□□□ 1.13
NR1H3-218ENST00000473222 EXOC6Q8TAG9 804 aa22.1■■□□□ 1.13
NR1H3-218ENST00000473222 RIPOR2Q9Y4F9 1068 aa22.1■■□□□ 1.13
NR1H3-218ENST00000473222 SIRT2Q8IXJ6 389 aa22.09■■□□□ 1.13
NR1H3-218ENST00000473222 KLHDC4Q8TBB5 520 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms