RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 CARMIL3Q8ND23 1372 aa10.66□□□□□ -0.7
LSAMP-202ENST00000473171 SERPINB2P05120 415 aa10.66□□□□□ -0.7
LSAMP-202ENST00000473171 DNAJB2P25686 324 aa10.66□□□□□ -0.7
LSAMP-202ENST00000473171 C1orf141Q5JVX7 400 aa10.66□□□□□ -0.7
LSAMP-202ENST00000473171 BICDL1Q6ZP65 573 aa10.66□□□□□ -0.7
LSAMP-202ENST00000473171 SLF2Q8IX21 1173 aa10.66□□□□□ -0.7
LSAMP-202ENST00000473171 SOS1Q07889 1333 aaPredicted RBP10.65□□□□□ -0.7
LSAMP-202ENST00000473171 OATP04181 439 aa10.65□□□□□ -0.7
LSAMP-202ENST00000473171 ERFEQ4G0M1 354 aa10.65□□□□□ -0.7
LSAMP-202ENST00000473171 NECTIN2Q92692 538 aa10.65□□□□□ -0.7
LSAMP-202ENST00000473171 POLR3GLQ9BT43 218 aa10.65□□□□□ -0.7
LSAMP-202ENST00000473171 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 ZNF831Q5JPB2 1677 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 H0YIN7 160 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 C21orf2O43822 256 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 AIDAQ96BJ3 306 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 ZBTB1Q9Y2K1 713 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 COL15A1P39059 1388 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 CNTNAP1P78357 1384 aa10.64□□□□□ -0.71
LSAMP-202ENST00000473171 MYH14Q7Z406 1995 aaKnown RBP10.63□□□□□ -0.71
LSAMP-202ENST00000473171 DDNO94850 711 aaPredicted RBP10.63□□□□□ -0.71
LSAMP-202ENST00000473171 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
LSAMP-202ENST00000473171 ZNF622Q969S3 477 aaKnown RBP eCLIP10.63□□□□□ -0.71
LSAMP-202ENST00000473171 PRDM10Q9NQV6 1147 aa10.63□□□□□ -0.71
LSAMP-202ENST00000473171 NARFQ9UHQ1 456 aa10.63□□□□□ -0.71
LSAMP-202ENST00000473171 TJP1Q07157 1748 aa10.62□□□□□ -0.71
LSAMP-202ENST00000473171 RCCD1A6NED2 376 aa10.62□□□□□ -0.71
LSAMP-202ENST00000473171 CYP19A1P11511 503 aaPredicted RBP10.62□□□□□ -0.71
LSAMP-202ENST00000473171 FECHP22830 423 aa10.62□□□□□ -0.71
LSAMP-202ENST00000473171 CTCFP49711 727 aaPredicted RBP10.62□□□□□ -0.71
LSAMP-202ENST00000473171 VEGFBP49765 207 aa10.62□□□□□ -0.71
LSAMP-202ENST00000473171 LBX1P52954 281 aa10.62□□□□□ -0.71
LSAMP-202ENST00000473171 TIAM2Q8IVF5 1701 aa10.61□□□□□ -0.71
LSAMP-202ENST00000473171 ADAMTS7Q9UKP4 1686 aa10.61□□□□□ -0.71
LSAMP-202ENST00000473171 GPR37O15354 613 aa10.61□□□□□ -0.71
LSAMP-202ENST00000473171 CANXP27824 592 aaKnown RBP10.61□□□□□ -0.71
LSAMP-202ENST00000473171 SULT6B1Q6IMI4 303 aa10.61□□□□□ -0.71
LSAMP-202ENST00000473171 TAOK3Q9H2K8 898 aa10.6□□□□□ -0.71
LSAMP-202ENST00000473171 SLC52A2Q9HAB3 445 aa10.6□□□□□ -0.71
LSAMP-202ENST00000473171 LGR6Q9HBX8 967 aa10.6□□□□□ -0.71
LSAMP-202ENST00000473171 SBF1O95248 1867 aa10.59□□□□□ -0.71
LSAMP-202ENST00000473171 EAPPQ56P03 285 aaPredicted RBP10.59□□□□□ -0.71
LSAMP-202ENST00000473171 TBC1D9BQ66K14 1250 aa10.59□□□□□ -0.71
LSAMP-202ENST00000473171 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
LSAMP-202ENST00000473171 ABHD8Q96I13 439 aa10.59□□□□□ -0.71
LSAMP-202ENST00000473171 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
LSAMP-202ENST00000473171 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
LSAMP-202ENST00000473171 PASKQ96RG2 1323 aa10.58□□□□□ -0.71
LSAMP-202ENST00000473171 TMEM88BA6NKF7 163 aa10.58□□□□□ -0.72
LSAMP-202ENST00000473171 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
LSAMP-202ENST00000473171 LDHDQ86WU2 507 aa10.58□□□□□ -0.72
LSAMP-202ENST00000473171 TAF1DQ9H5J8 278 aaPredicted RBP10.58□□□□□ -0.72
LSAMP-202ENST00000473171 IQCA1LA6NCM1 817 aa10.57□□□□□ -0.72
LSAMP-202ENST00000473171 NPHP1O15259 732 aa10.57□□□□□ -0.72
LSAMP-202ENST00000473171 RNMTO43148 476 aaKnown RBP10.57□□□□□ -0.72
LSAMP-202ENST00000473171 HSPA8P11142 646 aaKnown RBP10.57□□□□□ -0.72
LSAMP-202ENST00000473171 PDE6BP35913 854 aa10.57□□□□□ -0.72
LSAMP-202ENST00000473171 KCNC4Q03721 635 aa10.57□□□□□ -0.72
LSAMP-202ENST00000473171 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
LSAMP-202ENST00000473171 PRR5LQ6MZQ0 368 aa10.57□□□□□ -0.72
LSAMP-202ENST00000473171 NRXN2Q9P2S2 1712 aa10.56□□□□□ -0.72
LSAMP-202ENST00000473171 ITGBL1O95965 494 aaPredicted RBP10.56□□□□□ -0.72
LSAMP-202ENST00000473171 PRPF40BQ6NWY9 871 aaKnown RBP10.56□□□□□ -0.72
LSAMP-202ENST00000473171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
LSAMP-202ENST00000473171 BRIP1Q9BX63 1249 aa10.56□□□□□ -0.72
LSAMP-202ENST00000473171 TBC1D2BQ9UPU7 963 aa10.56□□□□□ -0.72
LSAMP-202ENST00000473171 ZNF541Q9H0D2 1346 aa10.56□□□□□ -0.72
LSAMP-202ENST00000473171 LTBP3Q9NS15 1303 aa10.56□□□□□ -0.72
LSAMP-202ENST00000473171 CCDC85CA6NKD9 419 aa10.55□□□□□ -0.72
LSAMP-202ENST00000473171 MAP1SQ66K74 1059 aaPredicted RBP10.55□□□□□ -0.72
LSAMP-202ENST00000473171 MORC1Q86VD1 984 aa10.55□□□□□ -0.72
LSAMP-202ENST00000473171 PRR14Q9BWN1 585 aa10.55□□□□□ -0.72
LSAMP-202ENST00000473171 AFDNP55196 1824 aaKnown RBP10.54□□□□□ -0.72
LSAMP-202ENST00000473171 HMOX1P09601 288 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 IL13P35225 146 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 EIF5P55010 431 aaKnown RBP10.54□□□□□ -0.72
LSAMP-202ENST00000473171 GRM1Q13255 1194 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 CNKSR1Q969H4 720 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 PANK3Q9H999 370 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 ZNF277Q9NRM2 450 aaPredicted RBP10.54□□□□□ -0.72
LSAMP-202ENST00000473171 ABT1Q9ULW3 272 aaKnown RBP10.54□□□□□ -0.72
LSAMP-202ENST00000473171 DLEC1Q9Y238 1755 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 MRC1P22897 1456 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 RNF123Q5XPI4 1314 aa10.54□□□□□ -0.72
LSAMP-202ENST00000473171 A0A087WZG4 1122 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 RASSF10A6NK89 507 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 STARD3NLO95772 234 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 SRGNP10124 158 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 EPHX2P34913 555 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 ST5P78524 1137 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 MLLT1Q03111 559 aaPredicted RBP10.53□□□□□ -0.72
LSAMP-202ENST00000473171 DEFB115Q30KQ5 88 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 TTC5Q8N0Z6 440 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 HACL1Q9UJ83 578 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 PDZRN3Q9UPQ7 1066 aa10.53□□□□□ -0.72
LSAMP-202ENST00000473171 WDR33Q9C0J8 1336 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms