RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 ABCC12Q96J65 1359 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 COL4A1P02462 1669 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 HMGB2P26583 209 aaKnown RBP11.37□□□□□ -0.59
KDM5B-207ENST00000472822 SF3B2Q13435 895 aaKnown RBP11.37□□□□□ -0.59
KDM5B-207ENST00000472822 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 CCDC125Q86Z20 511 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 OTUD7AQ8TE49 926 aaPredicted RBP11.37□□□□□ -0.59
KDM5B-207ENST00000472822 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
KDM5B-207ENST00000472822 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
KDM5B-207ENST00000472822 CCDC85AQ96PX6 553 aaPredicted RBP11.37□□□□□ -0.59
KDM5B-207ENST00000472822 LAMB2P55268 1798 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
KDM5B-207ENST00000472822 CASZ1Q86V15 1759 aa11.36□□□□□ -0.59
KDM5B-207ENST00000472822 PDE8AO60658 829 aa11.36□□□□□ -0.59
KDM5B-207ENST00000472822 SASH1O94885 1247 aa11.36□□□□□ -0.59
KDM5B-207ENST00000472822 RGS3P49796 1198 aa11.36□□□□□ -0.59
KDM5B-207ENST00000472822 CTSWP56202 376 aa11.36□□□□□ -0.59
KDM5B-207ENST00000472822 GREM2Q9H772 168 aa11.36□□□□□ -0.59
KDM5B-207ENST00000472822 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
KDM5B-207ENST00000472822 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
KDM5B-207ENST00000472822 NBPF5PQ86XG9 351 aaPredicted RBP11.35□□□□□ -0.59
KDM5B-207ENST00000472822 FLAD1Q8NFF5 587 aa11.35□□□□□ -0.59
KDM5B-207ENST00000472822 RHPN1Q8TCX5 695 aa11.35□□□□□ -0.59
KDM5B-207ENST00000472822 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
KDM5B-207ENST00000472822 SIL1Q9H173 461 aa11.35□□□□□ -0.59
KDM5B-207ENST00000472822 STK32BQ9NY57 414 aa11.35□□□□□ -0.59
KDM5B-207ENST00000472822 CHMP3Q9Y3E7 222 aa11.35□□□□□ -0.59
KDM5B-207ENST00000472822 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 TNRC6CQ9HCJ0 1690 aaKnown RBP11.34□□□□□ -0.59
KDM5B-207ENST00000472822 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 RAB11FIP3O75154 756 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 TAF1P21675 1872 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 PRR5LQ6MZQ0 368 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 SEC31BQ9NQW1 1179 aa11.34□□□□□ -0.59
KDM5B-207ENST00000472822 SERPINB2P05120 415 aa11.33□□□□□ -0.6
KDM5B-207ENST00000472822 ITGA6P23229 1130 aa11.33□□□□□ -0.6
KDM5B-207ENST00000472822 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
KDM5B-207ENST00000472822 TPTE2Q6XPS3 522 aa11.33□□□□□ -0.6
KDM5B-207ENST00000472822 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
KDM5B-207ENST00000472822 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
KDM5B-207ENST00000472822 NRXN2Q9P2S2 1712 aa11.33□□□□□ -0.6
KDM5B-207ENST00000472822 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
KDM5B-207ENST00000472822 ILDR2Q71H61 639 aa11.32□□□□□ -0.6
KDM5B-207ENST00000472822 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
KDM5B-207ENST00000472822 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
KDM5B-207ENST00000472822 BCL11AQ9H165 835 aa11.32□□□□□ -0.6
KDM5B-207ENST00000472822 RTL9Q8NET4 1388 aa11.32□□□□□ -0.6
KDM5B-207ENST00000472822 EYA2O00167 538 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 G3BP1Q13283 466 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■□□□□ 10.6
KDM5B-207ENST00000472822 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
KDM5B-207ENST00000472822 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 EAF2Q96CJ1 260 aaPredicted RBP11.31□□□□□ -0.6
KDM5B-207ENST00000472822 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 LRP5O75197 1615 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 CIAO1O76071 339 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 MMP10P09238 476 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 TFCP2Q12800 502 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 ANKRD31Q8N7Z5 1873 aa11.31□□□□□ -0.6
KDM5B-207ENST00000472822 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
KDM5B-207ENST00000472822 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
KDM5B-207ENST00000472822 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
KDM5B-207ENST00000472822 TSHZ3Q63HK5 1081 aa11.3□□□□□ -0.6
KDM5B-207ENST00000472822 RIC1Q4ADV7 1423 aa11.3□□□□□ -0.6
KDM5B-207ENST00000472822 PDE1AP54750 535 aa11.29□□□□□ -0.6
KDM5B-207ENST00000472822 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
KDM5B-207ENST00000472822 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
KDM5B-207ENST00000472822 ERC1Q8IUD2 1116 aa11.29□□□□□ -0.6
KDM5B-207ENST00000472822 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
KDM5B-207ENST00000472822 TLR7Q9NYK1 1049 aaKnown RBP11.29□□□□□ -0.6
KDM5B-207ENST00000472822 STAP2Q9UGK3 403 aa11.29□□□□□ -0.6
KDM5B-207ENST00000472822 SPEF2Q9C093 1822 aa11.29□□□□□ -0.6
KDM5B-207ENST00000472822 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
KDM5B-207ENST00000472822 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
KDM5B-207ENST00000472822 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
KDM5B-207ENST00000472822 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
KDM5B-207ENST00000472822 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
KDM5B-207ENST00000472822 VGLL2Q8N8G2 317 aa11.28□□□□□ -0.6
KDM5B-207ENST00000472822 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
KDM5B-207ENST00000472822 OSBPL3Q9H4L5 887 aa11.28□□□□□ -0.6
KDM5B-207ENST00000472822 FBXO3Q9UK99 471 aa11.28□□□□□ -0.6
KDM5B-207ENST00000472822 CRY2Q49AN0 593 aa11.27□□□□□ -0.6
KDM5B-207ENST00000472822 TNNI3KQ59H18 835 aa11.27□□□□□ -0.6
KDM5B-207ENST00000472822 CCDC8Q9H0W5 538 aaPredicted RBP11.27□□□□□ -0.6
KDM5B-207ENST00000472822 FPGT-TNNI3KV9GXZ4 949 aa11.27□□□□□ -0.6
KDM5B-207ENST00000472822 MX1P20591 662 aa11.27□□□□□ -0.61
KDM5B-207ENST00000472822 AACSQ86V21 672 aa11.27□□□□□ -0.61
KDM5B-207ENST00000472822 CLASRPQ8N2M8 674 aaKnown RBP11.27□□□□□ -0.61
KDM5B-207ENST00000472822 PI4K2BQ8TCG2 481 aa11.27□□□□□ -0.61
KDM5B-207ENST00000472822 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.61
KDM5B-207ENST00000472822 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
KDM5B-207ENST00000472822 SNAP23O00161 211 aa11.26□□□□□ -0.61
KDM5B-207ENST00000472822 TIMM10P62072 90 aa11.26□□□□□ -0.61
KDM5B-207ENST00000472822 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms