RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 CHPF2Q9P2E5 772 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 STAP2Q9UGK3 403 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 LRRFIP2Q9Y608 721 aaKnown RBP9.34□□□□□ -0.91
CCDC171-205ENST00000472806 CPDO75976 1380 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 HEG1Q9ULI3 1381 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 SMARCA5O60264 1052 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-205ENST00000472806 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-205ENST00000472806 PTGDRQ13258 359 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 BEND3Q5T5X7 828 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 KSR2Q6VAB6 950 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 C16orf71Q8IYS4 520 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-205ENST00000472806 KIF1BPQ96EK5 621 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 GBP4Q96PP9 640 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 PHAXQ9H814 394 aaKnown RBP9.33□□□□□ -0.92
CCDC171-205ENST00000472806 DDX21Q9NR30 783 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC171-205ENST00000472806 NLRP2Q9NX02 1062 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 EXOC6BQ9Y2D4 811 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 PXDNQ92626 1479 aa9.33□□□□□ -0.92
CCDC171-205ENST00000472806 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-205ENST00000472806 PI4KAP2A4QPH2 592 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 TLL1O43897 1013 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 ZPR1O75312 459 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 MCM2P49736 904 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 ZC3H6P61129 1189 aaKnown RBP9.32□□□□□ -0.92
CCDC171-205ENST00000472806 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 SLF2Q8IX21 1173 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 PI4KAP1Q8N8J0 262 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 GPATCH3Q96I76 525 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 USP26Q9BXU7 913 aa9.32□□□□□ -0.92
CCDC171-205ENST00000472806 C9orf78Q9NZ63 289 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-205ENST00000472806 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 PNMA6EA0A0J9YXQ4 647 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 SRGAP3O43295 1099 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 SURF6O75683 361 aaKnown RBP9.31□□□□□ -0.92
CCDC171-205ENST00000472806 PHKG2P15735 406 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 NEXNQ0ZGT2 675 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 MTX1Q13505 466 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 PPP1R42Q7Z4L9 355 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 TTC5Q8N0Z6 440 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 LINS1Q8NG48 757 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
CCDC171-205ENST00000472806 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
CCDC171-205ENST00000472806 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
CCDC171-205ENST00000472806 COL18A1P39060 1754 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 MRC1P22897 1456 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 ADCY9O60503 1353 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 GOLGA6L22H0YM25 854 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 MCM4P33991 863 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 ANAPC15P60006 121 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 L1TD1Q5T7N2 865 aaKnown RBP9.3□□□□□ -0.92
CCDC171-205ENST00000472806 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 LARP1Q6PKG0 1096 aaKnown RBP9.3□□□□□ -0.92
CCDC171-205ENST00000472806 RHPN1Q8TCX5 695 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 OTUD7AQ8TE49 926 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-205ENST00000472806 KIF2CQ99661 725 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 CWC22Q9HCG8 908 aaKnown RBP9.3□□□□□ -0.92
CCDC171-205ENST00000472806 MAP3K2Q9Y2U5 619 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 ADGRG1Q9Y653 693 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 TTC41PQ6P2S7 1318 aa9.3□□□□□ -0.92
CCDC171-205ENST00000472806 SCN11AQ9UI33 1791 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 PKD1L3Q7Z443 1732 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 NRG2O14511 850 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-205ENST00000472806 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-205ENST00000472806 KCNQ3O43525 872 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 SNRPA1P09661 255 aaKnown RBP9.29□□□□□ -0.92
CCDC171-205ENST00000472806 NUCB2P80303 420 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 OS9Q13438 667 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-205ENST00000472806 LAPTM4AQ15012 233 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 SKOR2Q2VWA4 1001 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-205ENST00000472806 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 CLASRPQ8N2M8 674 aaKnown RBP9.29□□□□□ -0.92
CCDC171-205ENST00000472806 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 STRCP1A6NGW2 1772 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 RGPD5Q99666 1765 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 UTYO14607 1347 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 ERBB4Q15303 1308 aa9.29□□□□□ -0.92
CCDC171-205ENST00000472806 PARP4Q9UKK3 1724 aaKnown RBP9.28□□□□□ -0.92
CCDC171-205ENST00000472806 DDIT3P35638 169 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 RUFY2Q8WXA3 655 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 RILPL2Q969X0 211 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 FMNL2Q96PY5 1086 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 ESYT1Q9BSJ8 1104 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 ISY1Q9ULR0 285 aaKnown RBP9.28□□□□□ -0.92
CCDC171-205ENST00000472806 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 USP42Q9H9J4 1324 aaKnown RBP9.28□□□□□ -0.92
CCDC171-205ENST00000472806 CRYBG1Q9Y4K1 1723 aa9.28□□□□□ -0.92
CCDC171-205ENST00000472806 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 RNF223E7ERA6 249 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 GRM8O00222 908 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 SEMA3EO15041 775 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 GLRX3O76003 335 aaKnown RBP9.27□□□□□ -0.93
CCDC171-205ENST00000472806 NBPF7P0C2Y1 421 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-205ENST00000472806 CHMLP26374 656 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 CABP4P57796 275 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 RAB3GAP1Q15042 981 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 TRIM67Q6ZTA4 783 aa9.27□□□□□ -0.93
CCDC171-205ENST00000472806 KDM6AO15550 1401 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms