RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 RBM17Q96I25 401 aaKnown RBP19.31■□□□□ 0.68
CALD1-215ENST00000472096 CRAMP1Q96RY5 1269 aa19.31■□□□□ 0.68
CALD1-215ENST00000472096 GPBP1L1Q9HC44 474 aaPredicted RBP19.31■□□□□ 0.68
CALD1-215ENST00000472096 ZC3H4Q9UPT8 1303 aaKnown RBP19.3■□□□□ 0.68
CALD1-215ENST00000472096 PI4KAP2A4QPH2 592 aa19.3■□□□□ 0.68
CALD1-215ENST00000472096 FLIIQ13045 1269 aa19.3■□□□□ 0.68
CALD1-215ENST00000472096 OLFM4Q6UX06 510 aa19.3■□□□□ 0.68
CALD1-215ENST00000472096 PI4KAP1Q8N8J0 262 aa19.3■□□□□ 0.68
CALD1-215ENST00000472096 FAM89AQ96GI7 184 aa19.3■□□□□ 0.68
CALD1-215ENST00000472096 ABCC4O15439 1325 aa19.29■□□□□ 0.68
CALD1-215ENST00000472096 E9PSI1 815 aa19.29■□□□□ 0.68
CALD1-215ENST00000472096 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
CALD1-215ENST00000472096 COL4A1P02462 1669 aa19.29■□□□□ 0.68
CALD1-215ENST00000472096 CWC25Q9NXE8 425 aaPredicted RBP19.28■□□□□ 0.68
CALD1-215ENST00000472096 PPEF1O14829 653 aaPredicted RBP19.27■□□□□ 0.68
CALD1-215ENST00000472096 SLFN5Q08AF3 891 aa19.27■□□□□ 0.68
CALD1-215ENST00000472096 FKBP5Q13451 457 aaPredicted RBP19.27■□□□□ 0.68
CALD1-215ENST00000472096 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
CALD1-215ENST00000472096 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
CALD1-215ENST00000472096 SPEF2Q9C093 1822 aa19.27■□□□□ 0.68
CALD1-215ENST00000472096 IRS4O14654 1257 aaPredicted RBP19.26■□□□□ 0.67
CALD1-215ENST00000472096 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
CALD1-215ENST00000472096 FKBP4Q02790 459 aaKnown RBP eCLIP19.26■□□□□ 0.67
CALD1-215ENST00000472096 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
CALD1-215ENST00000472096 SLC51AQ86UW1 340 aa19.26■□□□□ 0.67
CALD1-215ENST00000472096 RTKN2Q8IZC4 609 aa19.26■□□□□ 0.67
CALD1-215ENST00000472096 PCCAP05165 728 aaPredicted RBP19.25■□□□□ 0.67
CALD1-215ENST00000472096 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
CALD1-215ENST00000472096 CDCA7LQ96GN5 454 aa19.25■□□□□ 0.67
CALD1-215ENST00000472096 WDR90Q96KV7 1748 aa19.25■□□□□ 0.67
CALD1-215ENST00000472096 SF3B3Q15393 1217 aaKnown RBP19.24■□□□□ 0.67
CALD1-215ENST00000472096 DDX46Q7L014 1031 aaKnown RBP19.24■□□□□ 0.67
CALD1-215ENST00000472096 DNAAF4Q8WXU2 420 aa19.24■□□□□ 0.67
CALD1-215ENST00000472096 LTBP1Q14766 1721 aa19.24■□□□□ 0.67
CALD1-215ENST00000472096 NEURL1BA8MQ27 555 aa19.23■□□□□ 0.67
CALD1-215ENST00000472096 GRAPQ13588 217 aa19.23■□□□□ 0.67
CALD1-215ENST00000472096 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
CALD1-215ENST00000472096 GRAPLQ8TC17 118 aaPredicted RBP19.23■□□□□ 0.67
CALD1-215ENST00000472096 PSMD1Q99460 953 aa19.23■□□□□ 0.67
CALD1-215ENST00000472096 DUOX1Q9NRD9 1551 aa19.23■□□□□ 0.67
CALD1-215ENST00000472096 KDM2BQ8NHM5 1336 aa19.23■□□□□ 0.67
CALD1-215ENST00000472096 CDHR2Q9BYE9 1310 aa19.23■□□□□ 0.67
CALD1-215ENST00000472096 COL4A5P29400 1685 aa19.22■□□□□ 0.67
CALD1-215ENST00000472096 KIF3CO14782 793 aa19.22■□□□□ 0.67
CALD1-215ENST00000472096 HSP90B1P14625 803 aaKnown RBP19.22■□□□□ 0.67
CALD1-215ENST00000472096 TRMT2AQ8IZ69 625 aaKnown RBP19.22■□□□□ 0.67
CALD1-215ENST00000472096 NMRK2Q9NPI5 230 aa19.22■□□□□ 0.67
CALD1-215ENST00000472096 ZNF277Q9NRM2 450 aaPredicted RBP19.22■□□□□ 0.67
CALD1-215ENST00000472096 ATP6V0A2Q9Y487 856 aa19.22■□□□□ 0.67
CALD1-215ENST00000472096 GRIPAP1Q4V328 841 aa19.21■□□□□ 0.67
CALD1-215ENST00000472096 JARID2Q92833 1246 aaPredicted RBP19.21■□□□□ 0.67
CALD1-215ENST00000472096 PDE8AO60658 829 aa19.2■□□□□ 0.66
CALD1-215ENST00000472096 BBOX1O75936 387 aa19.2■□□□□ 0.66
CALD1-215ENST00000472096 IARSP41252 1262 aaKnown RBP19.2■□□□□ 0.66
CALD1-215ENST00000472096 GLTPD2A6NH11 291 aa19.19■□□□□ 0.66
CALD1-215ENST00000472096 F6X3S4 739 aa19.19■□□□□ 0.66
CALD1-215ENST00000472096 C1QTNF8P60827 252 aa19.19■□□□□ 0.66
CALD1-215ENST00000472096 GCKRQ14397 625 aa19.19■□□□□ 0.66
CALD1-215ENST00000472096 LINS1Q8NG48 757 aa19.19■□□□□ 0.66
CALD1-215ENST00000472096 CELF1Q92879 486 aaKnown RBP19.19■□□□□ 0.66
CALD1-215ENST00000472096 SCN4AP35499 1836 aa19.18■□□□□ 0.66
CALD1-215ENST00000472096 MNX1P50219 401 aaPredicted RBP19.18■□□□□ 0.66
CALD1-215ENST00000472096 TMC4Q7Z404 712 aa19.18■□□□□ 0.66
CALD1-215ENST00000472096 SP8Q8IXZ3 490 aa19.18■□□□□ 0.66
CALD1-215ENST00000472096 TMX4Q9H1E5 349 aaPredicted RBP19.18■□□□□ 0.66
CALD1-215ENST00000472096 CCDC152Q4G0S7 254 aa19.17■□□□□ 0.66
CALD1-215ENST00000472096 UBE3BQ7Z3V4 1068 aa19.17■□□□□ 0.66
CALD1-215ENST00000472096 MRPL50Q8N5N7 158 aaKnown RBP19.17■□□□□ 0.66
CALD1-215ENST00000472096 H7C1W4 665 aa19.16■□□□□ 0.66
CALD1-215ENST00000472096 CASP7P55210 303 aa19.16■□□□□ 0.66
CALD1-215ENST00000472096 CTSWP56202 376 aa19.16■□□□□ 0.66
CALD1-215ENST00000472096 BEND3Q5T5X7 828 aa19.16■□□□□ 0.66
CALD1-215ENST00000472096 CHADLQ6NUI6 762 aa19.16■□□□□ 0.66
CALD1-215ENST00000472096 SSH1Q8WYL5 1049 aa19.16■□□□□ 0.66
CALD1-215ENST00000472096 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
CALD1-215ENST00000472096 RTFDC1Q9BY42 306 aaPredicted RBP19.15■□□□□ 0.66
CALD1-215ENST00000472096 SEC31BQ9NQW1 1179 aa19.15■□□□□ 0.66
CALD1-215ENST00000472096 ZNF541Q9H0D2 1346 aa19.15■□□□□ 0.66
CALD1-215ENST00000472096 CT47B1P0C2W7 299 aaPredicted RBP19.14■□□□□ 0.65
CALD1-215ENST00000472096 ALDH1L2Q3SY69 923 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 DPY19L2Q6NUT2 758 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 DPP8Q6V1X1 898 aaPredicted RBP19.14■□□□□ 0.65
CALD1-215ENST00000472096 MPNDQ8N594 471 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 CCDC85AQ96PX6 553 aaPredicted RBP19.14■□□□□ 0.65
CALD1-215ENST00000472096 PLA2G12BQ9BX93 195 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 BCL2L13Q9BXK5 485 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 RRAGCQ9HB90 399 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 PTPRCP08575 1304 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 RTL9Q8NET4 1388 aa19.14■□□□□ 0.65
CALD1-215ENST00000472096 RPS8P62241 208 aaKnown RBP19.13■□□□□ 0.65
CALD1-215ENST00000472096 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
CALD1-215ENST00000472096 SUPT20HQ8NEM7 779 aa19.13■□□□□ 0.65
CALD1-215ENST00000472096 TTLL11Q8NHH1 800 aa19.13■□□□□ 0.65
CALD1-215ENST00000472096 CIZ1Q9ULV3 898 aaPredicted RBP19.13■□□□□ 0.65
CALD1-215ENST00000472096 FZD9O00144 591 aa19.12■□□□□ 0.65
CALD1-215ENST00000472096 PPIP5K2O43314 1243 aa19.12■□□□□ 0.65
CALD1-215ENST00000472096 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
CALD1-215ENST00000472096 LARGE2Q8N3Y3 721 aa19.12■□□□□ 0.65
CALD1-215ENST00000472096 JDP2Q8WYK2 163 aa19.12■□□□□ 0.65
CALD1-215ENST00000472096 ALDH1L1O75891 902 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms