RNA–Protein interactions for RNA: ENST00000471868.1

SUPT20H-209, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-209ENST00000471868 SPINT1O43278 529 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 GIGYF1O75420 1035 aaPredicted RBP6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 ADH1AP07327 375 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 MTHFSP49914 203 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 MCM6Q14566 821 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 ZNF428Q96B54 188 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 FER1L4A9Z1Z3 1794 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 KIF24Q5T7B8 1368 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 CD163L1Q9NR16 1453 aa6.79□□□□□ -1.32
SUPT20H-209ENST00000471868 C3P01024 1663 aa6.78□□□□□ -1.32
SUPT20H-209ENST00000471868 SOBPA7XYQ1 873 aa6.78□□□□□ -1.32
SUPT20H-209ENST00000471868 LILRA1O75019 489 aa6.78□□□□□ -1.32
SUPT20H-209ENST00000471868 SLFN5Q08AF3 891 aa6.78□□□□□ -1.32
SUPT20H-209ENST00000471868 NUDT16Q96DE0 195 aaKnown RBP6.78□□□□□ -1.32
SUPT20H-209ENST00000471868 MYH16Q9H6N6 1097 aa6.78□□□□□ -1.32
SUPT20H-209ENST00000471868 CABP1Q9NZU7 370 aa6.78□□□□□ -1.32
SUPT20H-209ENST00000471868 PPIP5K1Q6PFW1 1433 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 ANKRD26Q9UPS8 1709 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 DIAPH1O60610 1272 aaKnown RBP6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 LTKP29376 864 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 RRP1P56182 461 aaKnown RBP6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 RELBQ01201 579 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 LMOD3Q0VAK6 560 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 AGBL1Q96MI9 1066 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 CYLDQ9NQC7 956 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 DNMT3LQ9UJW3 386 aa6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 NKTRP30414 1462 aaKnown RBP6.77□□□□□ -1.33
SUPT20H-209ENST00000471868 PDE3AQ14432 1141 aa6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 DUSP27Q5VZP5 1158 aa6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 WAPLQ7Z5K2 1190 aa6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 COG3Q96JB2 828 aa6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 AMOTL2Q9Y2J4 779 aa6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 CEP170BQ9Y4F5 1589 aaPredicted RBP6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 LRRC7Q96NW7 1537 aa6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
SUPT20H-209ENST00000471868 ZNF142P52746 1687 aaPredicted RBP6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 ADAMTSL3P82987 1691 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 CDK12Q9NYV4 1490 aaPredicted RBP6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 USP31Q70CQ4 1352 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 ROBO2Q9HCK4 1378 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 APAF1O14727 1248 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 ADD1P35611 737 aaKnown RBP6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 ABL2P42684 1182 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 ERVK-9P63128 1117 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 FOXK2Q01167 660 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 IRF5Q13568 498 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 CNGB1Q14028 1251 aaPredicted RBP6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 CC2D2BQ6DHV5 1058 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 WWC1Q8IX03 1113 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 CHMP4BQ9H444 224 aaKnown RBP6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 GDPD2Q9HCC8 539 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 POLMQ9NP87 494 aaPredicted RBP6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 MAPK8IP3Q9UPT6 1336 aa6.75□□□□□ -1.33
SUPT20H-209ENST00000471868 ATP5J2-PTCD1G3V325 749 aa6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 U2AF1L5P0DN76 240 aaPredicted RBP6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 U2AF1Q01081 240 aaKnown RBP eCLIP6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 SAFB2Q14151 953 aaKnown RBP eCLIP6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 CCDC136Q96JN2 1154 aa6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 INSM2Q96T92 566 aaPredicted RBP6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 ZNF395Q9H8N7 513 aaPredicted RBP6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 PCDHB11Q9Y5F2 797 aa6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 TTC21BQ7Z4L5 1316 aa6.74□□□□□ -1.33
SUPT20H-209ENST00000471868 PLEKHH1Q9ULM0 1364 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 PPFIA3O75145 1194 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 PTGIRP43119 386 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 CTSOP43234 321 aaPredicted RBP6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 XP32Q5T750 250 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 CYP2U1Q7Z449 544 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 TCP11L2Q8N4U5 519 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 PLEKHF1Q96S99 279 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 CHMP4AQ9BY43 222 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 CEP126Q9P2H0 1117 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 USP6P35125 1406 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 COL3A1P02461 1466 aaPredicted RBP6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 IQSEC2Q5JU85 1478 aa6.73□□□□□ -1.33
SUPT20H-209ENST00000471868 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 FIGNL2A6NMB9 653 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 KCNA6P17658 529 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 CEBPAP49715 358 aaPredicted RBP6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 VAC14Q08AM6 782 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 KDF1Q8NAX2 398 aaPredicted RBP6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 POLKQ9UBT6 870 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 SSH2Q76I76 1423 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 PTPRUQ92729 1446 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 ITSN1Q15811 1721 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 MON2Q7Z3U7 1717 aa6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 XRN1Q8IZH2 1706 aaKnown RBP6.72□□□□□ -1.33
SUPT20H-209ENST00000471868 RIMS1Q86UR5 1692 aaKnown RBP6.71□□□□□ -1.33
SUPT20H-209ENST00000471868 SOX11P35716 441 aa6.71□□□□□ -1.34
SUPT20H-209ENST00000471868 TMPOP42166 694 aaKnown RBP6.71□□□□□ -1.34
SUPT20H-209ENST00000471868 PTSQ03393 145 aa6.71□□□□□ -1.34
SUPT20H-209ENST00000471868 FLIIQ13045 1269 aa6.71□□□□□ -1.34
SUPT20H-209ENST00000471868 TMEM132AQ24JP5 1023 aa6.71□□□□□ -1.34
SUPT20H-209ENST00000471868 GPAT2Q6NUI2 795 aa6.71□□□□□ -1.34
SUPT20H-209ENST00000471868 AKAP12Q02952 1782 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms