RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
GGPS1-204ENST00000471812 PLBD2Q8NHP8 589 aa12.22□□□□□ -0.45
GGPS1-204ENST00000471812 UTP14AQ9BVJ6 771 aaKnown RBP12.22□□□□□ -0.45
GGPS1-204ENST00000471812 GPBP1L1Q9HC44 474 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-204ENST00000471812 C1QTNF8P60827 252 aa12.21□□□□□ -0.45
GGPS1-204ENST00000471812 TWISTNBQ3B726 338 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-204ENST00000471812 CNKSR1Q969H4 720 aa12.21□□□□□ -0.45
GGPS1-204ENST00000471812 FAM89AQ96GI7 184 aa12.21□□□□□ -0.45
GGPS1-204ENST00000471812 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
GGPS1-204ENST00000471812 SPEF2Q9C093 1822 aa12.21□□□□□ -0.46
GGPS1-204ENST00000471812 IL16Q14005 1332 aa12.2□□□□□ -0.46
GGPS1-204ENST00000471812 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-204ENST00000471812 STK25O00506 426 aa12.2□□□□□ -0.46
GGPS1-204ENST00000471812 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-204ENST00000471812 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
GGPS1-204ENST00000471812 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
GGPS1-204ENST00000471812 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-204ENST00000471812 MYD88Q99836 296 aa12.2□□□□□ -0.46
GGPS1-204ENST00000471812 NYXQ9GZU5 481 aa12.2□□□□□ -0.46
GGPS1-204ENST00000471812 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
GGPS1-204ENST00000471812 TAOK2Q9UL54 1235 aa12.2□□□□□ -0.46
GGPS1-204ENST00000471812 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
GGPS1-204ENST00000471812 ABCC4O15439 1325 aa12.19□□□□□ -0.46
GGPS1-204ENST00000471812 POTECB2RU33 542 aa12.19□□□□□ -0.46
GGPS1-204ENST00000471812 VAMP4O75379 141 aa12.19□□□□□ -0.46
GGPS1-204ENST00000471812 LMNB1P20700 586 aa12.19□□□□□ -0.46
GGPS1-204ENST00000471812 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-204ENST00000471812 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
GGPS1-204ENST00000471812 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
GGPS1-204ENST00000471812 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-204ENST00000471812 ZNF277Q9NRM2 450 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-204ENST00000471812 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 LRRC37AA6NMS7 1700 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 WDR63Q8IWG1 891 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 TAOK3Q9H2K8 898 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 RRAGCQ9HB90 399 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 PDZRN3Q9UPQ7 1066 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
GGPS1-204ENST00000471812 MYH3P11055 1940 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 ZNF541Q9H0D2 1346 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 LTBP3Q9NS15 1303 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 PI4KAP2A4QPH2 592 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
GGPS1-204ENST00000471812 CWF19L2Q2TBE0 894 aaKnown RBP12.17□□□□□ -0.46
GGPS1-204ENST00000471812 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 PI4KAP1Q8N8J0 262 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 RPGRQ92834 1020 aaKnown RBP12.17□□□□□ -0.46
GGPS1-204ENST00000471812 LTBP1Q14766 1721 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
GGPS1-204ENST00000471812 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
GGPS1-204ENST00000471812 CEP350Q5VT06 3117 aa12.16□□□□□ -0.46
GGPS1-204ENST00000471812 PPEF1O14829 653 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-204ENST00000471812 CCDC93Q567U6 631 aa12.16□□□□□ -0.46
GGPS1-204ENST00000471812 HSP90AB3PQ58FF7 597 aa12.16□□□□□ -0.46
GGPS1-204ENST00000471812 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
GGPS1-204ENST00000471812 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-204ENST00000471812 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-204ENST00000471812 F6X3S4 739 aa12.15□□□□□ -0.46
GGPS1-204ENST00000471812 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-204ENST00000471812 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
GGPS1-204ENST00000471812 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.46
GGPS1-204ENST00000471812 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
GGPS1-204ENST00000471812 NLRP3Q96P20 1036 aa12.15□□□□□ -0.46
GGPS1-204ENST00000471812 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
GGPS1-204ENST00000471812 CRAMP1Q96RY5 1269 aa12.15□□□□□ -0.46
GGPS1-204ENST00000471812 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
GGPS1-204ENST00000471812 WTIPA6NIX2 430 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-204ENST00000471812 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-204ENST00000471812 FLIIQ13045 1269 aa12.14□□□□□ -0.47
GGPS1-204ENST00000471812 TRIM28Q13263 835 aaKnown RBP12.14□□□□□ -0.47
GGPS1-204ENST00000471812 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
GGPS1-204ENST00000471812 RBM17Q96I25 401 aaKnown RBP12.14□□□□□ -0.47
GGPS1-204ENST00000471812 GPR101Q96P66 508 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-204ENST00000471812 SCN9AQ15858 1988 aa12.13□□□□□ -0.47
GGPS1-204ENST00000471812 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
GGPS1-204ENST00000471812 ALDH1B1P30837 517 aa12.13□□□□□ -0.47
GGPS1-204ENST00000471812 HTRA3P83110 453 aa12.13□□□□□ -0.47
GGPS1-204ENST00000471812 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
GGPS1-204ENST00000471812 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
GGPS1-204ENST00000471812 IARSP41252 1262 aaKnown RBP12.12□□□□□ -0.47
GGPS1-204ENST00000471812 STK31Q9BXU1 1019 aa12.12□□□□□ -0.47
GGPS1-204ENST00000471812 ATP6V0A2Q9Y487 856 aa12.12□□□□□ -0.47
GGPS1-204ENST00000471812 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
GGPS1-204ENST00000471812 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
GGPS1-204ENST00000471812 PCCAP05165 728 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-204ENST00000471812 CASP7P55210 303 aa12.11□□□□□ -0.47
GGPS1-204ENST00000471812 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
GGPS1-204ENST00000471812 GRAPQ13588 217 aa12.11□□□□□ -0.47
GGPS1-204ENST00000471812 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
GGPS1-204ENST00000471812 AOC3Q16853 763 aa12.11□□□□□ -0.47
GGPS1-204ENST00000471812 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-204ENST00000471812 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
GGPS1-204ENST00000471812 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-204ENST00000471812 CWC25Q9NXE8 425 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-204ENST00000471812 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
GGPS1-204ENST00000471812 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
GGPS1-204ENST00000471812 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms