RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 RTL9Q8NET4 1388 aa17.64■□□□□ 0.41
SSR4-207ENST00000471724 SRGNP10124 158 aa17.63■□□□□ 0.41
SSR4-207ENST00000471724 NPR1P16066 1061 aa17.63■□□□□ 0.41
SSR4-207ENST00000471724 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
SSR4-207ENST00000471724 CCDC152Q4G0S7 254 aa17.63■□□□□ 0.41
SSR4-207ENST00000471724 STYK1Q6J9G0 422 aa17.63■□□□□ 0.41
SSR4-207ENST00000471724 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
SSR4-207ENST00000471724 MASTLQ96GX5 879 aa17.63■□□□□ 0.41
SSR4-207ENST00000471724 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
SSR4-207ENST00000471724 LRRC37AA6NMS7 1700 aa17.63■□□□□ 0.41
SSR4-207ENST00000471724 TAF1P21675 1872 aa17.63■□□□□ 0.41
SSR4-207ENST00000471724 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
SSR4-207ENST00000471724 COG6Q9Y2V7 657 aa17.62■□□□□ 0.41
SSR4-207ENST00000471724 SLX4Q8IY92 1834 aa17.61■□□□□ 0.41
SSR4-207ENST00000471724 DPEP1P16444 411 aa17.61■□□□□ 0.41
SSR4-207ENST00000471724 CHRNA5P30532 468 aa17.61■□□□□ 0.41
SSR4-207ENST00000471724 C20orf194Q5TEA3 1177 aa17.61■□□□□ 0.41
SSR4-207ENST00000471724 C3orf67Q6ZVT6 689 aa17.61■□□□□ 0.41
SSR4-207ENST00000471724 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
SSR4-207ENST00000471724 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
SSR4-207ENST00000471724 SUCLG2Q96I99 432 aa17.61■□□□□ 0.41
SSR4-207ENST00000471724 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
SSR4-207ENST00000471724 HOXA10P31260 410 aaPredicted RBP17.6■□□□□ 0.41
SSR4-207ENST00000471724 RABL6Q3YEC7 729 aaPredicted RBP17.6■□□□□ 0.41
SSR4-207ENST00000471724 CNKSR1Q969H4 720 aa17.6■□□□□ 0.41
SSR4-207ENST00000471724 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
SSR4-207ENST00000471724 A0A1B0GUL6 1792 aa17.59■□□□□ 0.41
SSR4-207ENST00000471724 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
SSR4-207ENST00000471724 GNAI2P04899 355 aa17.59■□□□□ 0.41
SSR4-207ENST00000471724 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
SSR4-207ENST00000471724 FOXO4P98177 505 aa17.59■□□□□ 0.41
SSR4-207ENST00000471724 TTLL11Q8NHH1 800 aa17.59■□□□□ 0.41
SSR4-207ENST00000471724 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.41
SSR4-207ENST00000471724 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
SSR4-207ENST00000471724 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
SSR4-207ENST00000471724 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
SSR4-207ENST00000471724 CSF1RP07333 972 aa17.58■□□□□ 0.4
SSR4-207ENST00000471724 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.4
SSR4-207ENST00000471724 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
SSR4-207ENST00000471724 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.4
SSR4-207ENST00000471724 KCNA3P22001 575 aa17.57■□□□□ 0.4
SSR4-207ENST00000471724 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
SSR4-207ENST00000471724 DALRD3Q5D0E6 543 aaKnown RBP17.57■□□□□ 0.4
SSR4-207ENST00000471724 TTLL6Q8N841 843 aa17.57■□□□□ 0.4
SSR4-207ENST00000471724 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
SSR4-207ENST00000471724 WWC3Q9ULE0 1092 aa17.57■□□□□ 0.4
SSR4-207ENST00000471724 COL4A1P02462 1669 aa17.56■□□□□ 0.4
SSR4-207ENST00000471724 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
SSR4-207ENST00000471724 GRAPQ13588 217 aa17.56■□□□□ 0.4
SSR4-207ENST00000471724 EPHA10Q5JZY3 1008 aa17.56■□□□□ 0.4
SSR4-207ENST00000471724 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
SSR4-207ENST00000471724 TMC4Q7Z404 712 aa17.56■□□□□ 0.4
SSR4-207ENST00000471724 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
SSR4-207ENST00000471724 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
SSR4-207ENST00000471724 GREM2Q9H772 168 aa17.56■□□□□ 0.4
SSR4-207ENST00000471724 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
SSR4-207ENST00000471724 ANKRD18BA2A2Z9 1011 aa17.55■□□□□ 0.4
SSR4-207ENST00000471724 ITGA6P23229 1130 aa17.55■□□□□ 0.4
SSR4-207ENST00000471724 MTX1Q13505 466 aa17.55■□□□□ 0.4
SSR4-207ENST00000471724 AAMPQ13685 434 aa17.55■□□□□ 0.4
SSR4-207ENST00000471724 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
SSR4-207ENST00000471724 CCDC85AQ96PX6 553 aaPredicted RBP17.55■□□□□ 0.4
SSR4-207ENST00000471724 ZBTB40Q9NUA8 1239 aa17.55■□□□□ 0.4
SSR4-207ENST00000471724 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
SSR4-207ENST00000471724 SOGA3Q5TF21 947 aa17.54■□□□□ 0.4
SSR4-207ENST00000471724 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
SSR4-207ENST00000471724 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
SSR4-207ENST00000471724 LTBP1Q14766 1721 aa17.53■□□□□ 0.4
SSR4-207ENST00000471724 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
SSR4-207ENST00000471724 BBOX1O75936 387 aa17.53■□□□□ 0.4
SSR4-207ENST00000471724 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
SSR4-207ENST00000471724 TMX4Q9H1E5 349 aaPredicted RBP17.52■□□□□ 0.4
SSR4-207ENST00000471724 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.4
SSR4-207ENST00000471724 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
SSR4-207ENST00000471724 RPS8P62241 208 aaKnown RBP17.51■□□□□ 0.39
SSR4-207ENST00000471724 CC2D2BQ6DHV5 1058 aa17.51■□□□□ 0.39
SSR4-207ENST00000471724 ARHGAP27Q6ZUM4 889 aa17.51■□□□□ 0.39
SSR4-207ENST00000471724 CELF1Q92879 486 aaKnown RBP17.51■□□□□ 0.39
SSR4-207ENST00000471724 UTRNP46939 3433 aa17.5■□□□□ 0.39
SSR4-207ENST00000471724 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
SSR4-207ENST00000471724 GRIPAP1Q4V328 841 aa17.5■□□□□ 0.39
SSR4-207ENST00000471724 ZNF784Q8NCA9 323 aaPredicted RBP17.5■□□□□ 0.39
SSR4-207ENST00000471724 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
SSR4-207ENST00000471724 HMMRO75330 724 aa17.49■□□□□ 0.39
SSR4-207ENST00000471724 NEFLP07196 543 aa17.49■□□□□ 0.39
SSR4-207ENST00000471724 CCDC93Q567U6 631 aa17.49■□□□□ 0.39
SSR4-207ENST00000471724 CEP85Q6P2H3 762 aa17.49■□□□□ 0.39
SSR4-207ENST00000471724 RPAP2Q8IXW5 612 aaPredicted RBP17.49■□□□□ 0.39
SSR4-207ENST00000471724 BSDC1Q9NW68 430 aaPredicted RBP17.49■□□□□ 0.39
SSR4-207ENST00000471724 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
SSR4-207ENST00000471724 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
SSR4-207ENST00000471724 FBXO3Q9UK99 471 aa17.48■□□□□ 0.39
SSR4-207ENST00000471724 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
SSR4-207ENST00000471724 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
SSR4-207ENST00000471724 DICER1Q9UPY3 1922 aaKnown RBP17.47■□□□□ 0.39
SSR4-207ENST00000471724 C21orf2O43822 256 aa17.47■□□□□ 0.39
SSR4-207ENST00000471724 ATP8B2P98198 1209 aa17.47■□□□□ 0.39
SSR4-207ENST00000471724 LDHAL6AQ6ZMR3 332 aa17.47■□□□□ 0.39
SSR4-207ENST00000471724 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
SSR4-207ENST00000471724 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms