RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FAM200AQ8TCP9 573 aa9.9□□□□□ -0.83
CD47-204ENST00000471694 GTF3C6Q969F1 213 aa9.9□□□□□ -0.83
CD47-204ENST00000471694 ZSCAN31Q96LW9 406 aaPredicted RBP9.9□□□□□ -0.83
CD47-204ENST00000471694 CFAP45Q9UL16 551 aa9.9□□□□□ -0.83
CD47-204ENST00000471694 CCDC91Q7Z6B0 441 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 TSNARE1Q96NA8 513 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 PDZRN3Q9UPQ7 1066 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 ZBTB33Q86T24 672 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 HAND2P61296 217 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 KLHL10Q6JEL2 608 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 PRPF40BQ6NWY9 871 aaKnown RBP9.89□□□□□ -0.83
CD47-204ENST00000471694 IMPG2Q9BZV3 1241 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.89□□□□□ -0.83
CD47-204ENST00000471694 KRT85P78386 507 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 DLGAP5Q15398 846 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 CCDC40Q4G0X9 1142 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 USP37Q86T82 979 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 PTPDC1A2A3K4 754 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 ZBED4O75132 1171 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 GUCY1B3Q02153 619 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 USP48Q86UV5 1035 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
CD47-204ENST00000471694 SMARCA5O60264 1052 aaPredicted RBP9.88□□□□□ -0.83
CD47-204ENST00000471694 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
CD47-204ENST00000471694 AKNAD1Q5T1N1 836 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 DDX17Q92841 729 aaKnown RBP9.88□□□□□ -0.83
CD47-204ENST00000471694 C8orf76Q96K31 380 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 MCM9Q9NXL9 1143 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 ANXA1P04083 346 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 COPS6Q7L5N1 327 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 ABCC5O15440 1437 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 MAST3O60307 1309 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 ADGRF5Q8IZF2 1346 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 AKAP4Q5JQC9 854 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 CCDC191Q8NCU4 936 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 PPIP5K1Q6PFW1 1433 aa9.88□□□□□ -0.83
CD47-204ENST00000471694 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 NAPAP54920 295 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 ARID5AQ03989 594 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 HMGB1P09429 215 aaKnown RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 AXDND1Q5T1B0 1012 aaPredicted RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 STAMBPO95630 424 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 NOC2LQ9Y3T9 749 aaKnown RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 GSTTP1A0A1W2PQM5 241 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 PABPC4Q13310 644 aaKnown RBP eCLIP9.87□□□□□ -0.83
CD47-204ENST00000471694 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 HELBQ8NG08 1087 aaPredicted RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 RRP36Q96EU6 259 aaKnown RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 AS3MTQ9HBK9 375 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 SPA17Q15506 151 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 MX1P20591 662 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 DEKP35659 375 aaKnown RBP9.87□□□□□ -0.83
CD47-204ENST00000471694 WTAPQ15007 396 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 KRT27Q7Z3Y8 459 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 MPNDQ8N594 471 aa9.87□□□□□ -0.83
CD47-204ENST00000471694 MYCLP12524 364 aaPredicted RBP9.86□□□□□ -0.83
CD47-204ENST00000471694 KRT13P13646 458 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 CHD1LQ86WJ1 897 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 TEX11Q8IYF3 940 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 SLC26A6Q9BXS9 759 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 LRRC27Q9C0I9 530 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 CHPF2Q9P2E5 772 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 NR1I2O75469 434 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 CCT2P78371 535 aaKnown RBP9.86□□□□□ -0.83
CD47-204ENST00000471694 RNF34Q969K3 372 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 ALS2CR12Q96Q35 445 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 GOPCQ9HD26 462 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 PIK3R4Q99570 1358 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 PI4KAP2A4QPH2 592 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 RAB11FIP4Q86YS3 637 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 FAM177A1Q8N128 213 aaPredicted RBP9.86□□□□□ -0.83
CD47-204ENST00000471694 PI4KAP1Q8N8J0 262 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 KRT23Q9C075 422 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 TCP10Q12799 353 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 MKRN3Q13064 507 aaKnown RBP9.86□□□□□ -0.83
CD47-204ENST00000471694 HSP90AA2PQ14568 343 aaPredicted RBP9.86□□□□□ -0.83
CD47-204ENST00000471694 HARSP12081 509 aaKnown RBP9.86□□□□□ -0.83
CD47-204ENST00000471694 FLIIQ13045 1269 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 MICU3Q86XE3 530 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 PLCH2O75038 1416 aa9.86□□□□□ -0.83
CD47-204ENST00000471694 CUL7Q14999 1698 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 SH3BP5O60239 455 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 TTC6Q86TZ1 520 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 KDM5BQ9UGL1 1544 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 METAP2P50579 478 aaKnown RBP eCLIP9.85□□□□□ -0.83
CD47-204ENST00000471694 ARMC9Q7Z3E5 817 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 ESR2Q92731 530 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 FAM193BQ96PV7 902 aaPredicted RBP9.85□□□□□ -0.83
CD47-204ENST00000471694 TSPY26PQ9H489 355 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 PRPF40AO75400 957 aaKnown RBP9.85□□□□□ -0.83
CD47-204ENST00000471694 ACTN2P35609 894 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 CHST3Q7LGC8 479 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 GCP02774 474 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 KCNA6P17658 529 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 TDRD12Q587J7 1177 aaKnown RBP9.85□□□□□ -0.83
CD47-204ENST00000471694 RNF169Q8NCN4 708 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms