RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 PARP3Q9Y6F1 533 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 CDK2AP1O14519 115 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 NEFLP07196 543 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 PBX2P40425 430 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 RHBDL3P58872 404 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 FERMT3Q86UX7 667 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 TRPM4Q8TD43 1214 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 WBP1LQ9NX94 342 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 STRIP2Q9ULQ0 834 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 POTECB2RU33 542 aa8.28□□□□□ -1.08
NF1-208ENST00000471572 EIF4A3P38919 411 aaKnown RBP8.28□□□□□ -1.08
NF1-208ENST00000471572 EVA1CP58658 441 aa8.28□□□□□ -1.08
NF1-208ENST00000471572 APBB1IPQ7Z5R6 666 aaPredicted RBP8.28□□□□□ -1.08
NF1-208ENST00000471572 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
NF1-208ENST00000471572 PHACTR1Q9C0D0 580 aa8.28□□□□□ -1.08
NF1-208ENST00000471572 CHMP3Q9Y3E7 222 aa8.28□□□□□ -1.08
NF1-208ENST00000471572 VIL1P09327 827 aaKnown RBP8.27□□□□□ -1.09
NF1-208ENST00000471572 TLR1Q15399 786 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 TEAD4Q15561 434 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 CYP2U1Q7Z449 544 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 HOMER1Q86YM7 354 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 FAM169BQ8N8A8 192 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 L3MBTL2Q969R5 705 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 SRCIN1Q9C0H9 1055 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 ZNF232Q9UNY5 417 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 FCF1Q9Y324 198 aaKnown RBP8.27□□□□□ -1.09
NF1-208ENST00000471572 HRH3Q9Y5N1 445 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 ZPR1O75312 459 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.09
NF1-208ENST00000471572 CDKN1CP49918 316 aaPredicted RBP8.27□□□□□ -1.09
NF1-208ENST00000471572 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 JAMLQ86YT9 394 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 TSR2Q969E8 191 aaKnown RBP8.27□□□□□ -1.09
NF1-208ENST00000471572 SHDQ96IW2 340 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 EID1Q9Y6B2 187 aa8.27□□□□□ -1.09
NF1-208ENST00000471572 TK2O00142 265 aa8.26□□□□□ -1.09
NF1-208ENST00000471572 SMAD7O15105 426 aaKnown RBP8.26□□□□□ -1.09
NF1-208ENST00000471572 PRC1O43663 620 aa8.26□□□□□ -1.09
NF1-208ENST00000471572 POLR3DP05423 398 aaPredicted RBP8.26□□□□□ -1.09
NF1-208ENST00000471572 FSHRP23945 695 aa8.26□□□□□ -1.09
NF1-208ENST00000471572 PRPF38AQ8NAV1 312 aaKnown RBP8.26□□□□□ -1.09
NF1-208ENST00000471572 C3orf58Q8NDZ4 430 aa8.26□□□□□ -1.09
NF1-208ENST00000471572 XAGE2Q96GT9 111 aa8.26□□□□□ -1.09
NF1-208ENST00000471572 FEZ1Q99689 392 aa8.26□□□□□ -1.09
NF1-208ENST00000471572 SLC6A16Q9GZN6 736 aa8.26□□□□□ -1.09
NF1-208ENST00000471572 CREB3O43889 395 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 CCDC81Q6ZN84 652 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 C16orf86Q6ZW13 317 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 TMEM74Q96NL1 305 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 ZFYVE28Q9HCC9 887 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 UBP1Q9NZI7 540 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 ERBB3P21860 1342 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 HRO43593 1189 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 EIF3JO75822 258 aaKnown RBP8.25□□□□□ -1.09
NF1-208ENST00000471572 POU3F3P20264 500 aaPredicted RBP8.25□□□□□ -1.09
NF1-208ENST00000471572 GBP2P32456 591 aaPredicted RBP8.25□□□□□ -1.09
NF1-208ENST00000471572 GRM2Q14416 872 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 SNX29Q8TEQ0 813 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 KLRG1Q96E93 195 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 CCDC113Q9H0I3 377 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 TMX1Q9H3N1 280 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 KCNQ5Q9NR82 932 aa8.25□□□□□ -1.09
NF1-208ENST00000471572 GARTP22102 1010 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 CRKP46108 304 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 TRIP4Q15650 581 aaPredicted RBP8.24□□□□□ -1.09
NF1-208ENST00000471572 PCNX4Q63HM2 1172 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 CCAR1Q8IX12 1150 aaKnown RBP8.24□□□□□ -1.09
NF1-208ENST00000471572 TTC16Q8NEE8 873 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 CNKSR1Q969H4 720 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 RHOVQ96L33 236 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 NT5C1AQ9BXI3 368 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 ST7Q9NRC1 585 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 BCCIPQ9P287 314 aaKnown RBP eCLIP8.24□□□□□ -1.09
NF1-208ENST00000471572 USP20Q9Y2K6 914 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 GRM5P41594 1212 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 C8orf48Q96LL4 319 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 RPS6KC1Q96S38 1066 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
NF1-208ENST00000471572 FAM160A1Q05DH4 1040 aa8.23□□□□□ -1.09
NF1-208ENST00000471572 DDR2Q16832 855 aa8.23□□□□□ -1.09
NF1-208ENST00000471572 ADGRD1Q6QNK2 874 aa8.23□□□□□ -1.09
NF1-208ENST00000471572 CPLX3Q8WVH0 158 aa8.23□□□□□ -1.09
NF1-208ENST00000471572 PPT2Q9UMR5 302 aa8.23□□□□□ -1.09
NF1-208ENST00000471572 SNPHO15079 494 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 CCDC85BQ15834 202 aaPredicted RBP8.22□□□□□ -1.09
NF1-208ENST00000471572 CTC1Q2NKJ3 1217 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 DALRD3Q5D0E6 543 aaKnown RBP8.22□□□□□ -1.09
NF1-208ENST00000471572 GLIS3Q8NEA6 775 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 CABP1Q9NZU7 370 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 R3HCC1Q9Y3T6 440 aaKnown RBP8.22□□□□□ -1.09
NF1-208ENST00000471572 GREM1O60565 184 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 PPFIA4O75335 1185 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 MICAL2O94851 1124 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 BIRC2Q13490 618 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 MAP9Q49MG5 647 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 RELL1Q8IUW5 271 aa8.22□□□□□ -1.09
NF1-208ENST00000471572 ESYT1Q9BSJ8 1104 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms