RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 KSR2Q6VAB6 950 aa9.82□□□□□ -0.84
TRIM59-204ENST00000471396 ZFP91Q96JP5 570 aaPredicted RBP9.82□□□□□ -0.84
TRIM59-204ENST00000471396 TRMT112Q9UI30 125 aaKnown RBP9.82□□□□□ -0.84
TRIM59-204ENST00000471396 LAMB2P55268 1798 aa9.82□□□□□ -0.84
TRIM59-204ENST00000471396 SBF1O95248 1867 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 FER1L6Q2WGJ9 1857 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 PI4KAP2A4QPH2 592 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 SLFN5Q08AF3 891 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 SOGA3Q5TF21 947 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 G2E3Q7L622 706 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
TRIM59-204ENST00000471396 PI4KAP1Q8N8J0 262 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 ZNF784Q8NCA9 323 aaPredicted RBP9.81□□□□□ -0.84
TRIM59-204ENST00000471396 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
TRIM59-204ENST00000471396 MYD88Q99836 296 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 METTL22Q9BUU2 404 aaPredicted RBP9.81□□□□□ -0.84
TRIM59-204ENST00000471396 MAP3K2Q9Y2U5 619 aa9.81□□□□□ -0.84
TRIM59-204ENST00000471396 DDX60Q8IY21 1712 aaKnown RBP9.81□□□□□ -0.84
TRIM59-204ENST00000471396 NFKBIEO00221 500 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 C21orf2O43822 256 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 HCLS1P14317 486 aaPredicted RBP9.8□□□□□ -0.84
TRIM59-204ENST00000471396 ALDH1B1P30837 517 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 HOXA10P31260 410 aaPredicted RBP9.8□□□□□ -0.84
TRIM59-204ENST00000471396 RASSF7Q02833 373 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
TRIM59-204ENST00000471396 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 CCDC191Q8NCU4 936 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 RBM17Q96I25 401 aaKnown RBP9.8□□□□□ -0.84
TRIM59-204ENST00000471396 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
TRIM59-204ENST00000471396 MAP3K13O43283 966 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 NEXNQ0ZGT2 675 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 C9orf131Q5VYM1 1079 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 SYNE4Q8N205 404 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 C7orf43Q8WVR3 580 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 KIF12Q96FN5 646 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 FAM89AQ96GI7 184 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 CWC25Q9NXE8 425 aaPredicted RBP9.79□□□□□ -0.84
TRIM59-204ENST00000471396 RNF181Q9P0P0 153 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 LTBP3Q9NS15 1303 aa9.79□□□□□ -0.84
TRIM59-204ENST00000471396 IRS4O14654 1257 aaPredicted RBP9.78□□□□□ -0.84
TRIM59-204ENST00000471396 PCCAP05165 728 aaPredicted RBP9.78□□□□□ -0.84
TRIM59-204ENST00000471396 HSP90B1P14625 803 aaKnown RBP9.78□□□□□ -0.84
TRIM59-204ENST00000471396 LMNB1P20700 586 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 TRMT2AQ8IZ69 625 aaKnown RBP9.78□□□□□ -0.84
TRIM59-204ENST00000471396 ZBTB38Q8NAP3 1195 aaPredicted RBP9.78□□□□□ -0.84
TRIM59-204ENST00000471396 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 DNAAF4Q8WXU2 420 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 TAOK3Q9H2K8 898 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 SNED1Q8TER0 1413 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 CCDC88AQ3V6T2 1871 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 ABCC4O15439 1325 aa9.78□□□□□ -0.84
TRIM59-204ENST00000471396 ZC3H4Q9UPT8 1303 aaKnown RBP9.78□□□□□ -0.84
TRIM59-204ENST00000471396 NEURL1BA8MQ27 555 aa9.77□□□□□ -0.85
TRIM59-204ENST00000471396 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
TRIM59-204ENST00000471396 IGKV5-2P06315 115 aa9.77□□□□□ -0.85
TRIM59-204ENST00000471396 CLCN6P51797 869 aa9.77□□□□□ -0.85
TRIM59-204ENST00000471396 PRELPP51888 382 aa9.77□□□□□ -0.85
TRIM59-204ENST00000471396 RTL5Q5HYW3 569 aaPredicted RBP9.77□□□□□ -0.85
TRIM59-204ENST00000471396 DICER1Q9UPY3 1922 aaKnown RBP9.77□□□□□ -0.85
TRIM59-204ENST00000471396 CDHR2Q9BYE9 1310 aa9.77□□□□□ -0.85
TRIM59-204ENST00000471396 CT47B1P0C2W7 299 aaPredicted RBP9.76□□□□□ -0.85
TRIM59-204ENST00000471396 HNRNPUQ00839 825 aaKnown RBP eCLIP9.76□□□□□ -0.85
TRIM59-204ENST00000471396 SF3B3Q15393 1217 aaKnown RBP9.76□□□□□ -0.85
TRIM59-204ENST00000471396 CWF19L2Q2TBE0 894 aaKnown RBP9.76□□□□□ -0.85
TRIM59-204ENST00000471396 CC2D2BQ6DHV5 1058 aa9.76□□□□□ -0.85
TRIM59-204ENST00000471396 OLFM4Q6UX06 510 aa9.76□□□□□ -0.85
TRIM59-204ENST00000471396 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
TRIM59-204ENST00000471396 IFNL1Q8IU54 200 aa9.76□□□□□ -0.85
TRIM59-204ENST00000471396 RTKN2Q8IZC4 609 aa9.76□□□□□ -0.85
TRIM59-204ENST00000471396 LINS1Q8NG48 757 aa9.76□□□□□ -0.85
TRIM59-204ENST00000471396 MYH3P11055 1940 aa9.76□□□□□ -0.85
TRIM59-204ENST00000471396 F6X3S4 739 aa9.75□□□□□ -0.85
TRIM59-204ENST00000471396 GALR2O43603 387 aaPredicted RBP9.75□□□□□ -0.85
TRIM59-204ENST00000471396 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRIM59-204ENST00000471396 PDAP1Q13442 181 aaKnown RBP9.75□□□□□ -0.85
TRIM59-204ENST00000471396 GRAPQ13588 217 aa9.75□□□□□ -0.85
TRIM59-204ENST00000471396 GCKRQ14397 625 aa9.75□□□□□ -0.85
TRIM59-204ENST00000471396 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
TRIM59-204ENST00000471396 MRPL50Q8N5N7 158 aaKnown RBP9.75□□□□□ -0.85
TRIM59-204ENST00000471396 GRAPLQ8TC17 118 aaPredicted RBP9.75□□□□□ -0.85
TRIM59-204ENST00000471396 ZNF526Q8TF50 670 aaPredicted RBP9.75□□□□□ -0.85
TRIM59-204ENST00000471396 SSH1Q8WYL5 1049 aa9.75□□□□□ -0.85
TRIM59-204ENST00000471396 GPBP1L1Q9HC44 474 aaPredicted RBP9.75□□□□□ -0.85
TRIM59-204ENST00000471396 LRRC37AA6NMS7 1700 aa9.75□□□□□ -0.85
TRIM59-204ENST00000471396 TAF1P21675 1872 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 PDE8AO60658 829 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 BBOX1O75936 387 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 ALDH1L2Q3SY69 923 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 TMC4Q7Z404 712 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 JARID2Q92833 1246 aaPredicted RBP9.74□□□□□ -0.85
TRIM59-204ENST00000471396 PSMD1Q99460 953 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms