RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ELP3Q9H9T3 547 aa9.97□□□□□ -0.81
SMC5-202ENST00000471372 FNDC3AQ9Y2H6 1198 aaKnown RBP9.97□□□□□ -0.81
SMC5-202ENST00000471372 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
SMC5-202ENST00000471372 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
SMC5-202ENST00000471372 CTSOP43234 321 aaPredicted RBP9.95□□□□□ -0.82
SMC5-202ENST00000471372 NBPF10Q6P3W6 841 aaKnown RBP9.95□□□□□ -0.82
SMC5-202ENST00000471372 LRRC69Q6ZNQ3 347 aa9.95□□□□□ -0.82
SMC5-202ENST00000471372 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
SMC5-202ENST00000471372 MCF2L2Q86YR7 1114 aa9.95□□□□□ -0.82
SMC5-202ENST00000471372 BCO2Q9BYV7 579 aa9.95□□□□□ -0.82
SMC5-202ENST00000471372 CHRDQ9H2X0 955 aa9.95□□□□□ -0.82
SMC5-202ENST00000471372 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
SMC5-202ENST00000471372 COPRSQ9NQ92 184 aa9.95□□□□□ -0.82
SMC5-202ENST00000471372 ANKIB1Q9P2G1 1089 aa9.95□□□□□ -0.82
SMC5-202ENST00000471372 GPC6Q9Y625 555 aaPredicted RBP9.95□□□□□ -0.82
SMC5-202ENST00000471372 TTC24A2A3L6 582 aaPredicted RBP9.94□□□□□ -0.82
SMC5-202ENST00000471372 POTECB2RU33 542 aa9.94□□□□□ -0.82
SMC5-202ENST00000471372 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
SMC5-202ENST00000471372 SPINT1O43278 529 aa9.94□□□□□ -0.82
SMC5-202ENST00000471372 ST13P50502 369 aaKnown RBP9.94□□□□□ -0.82
SMC5-202ENST00000471372 RBL2Q08999 1139 aa9.94□□□□□ -0.82
SMC5-202ENST00000471372 POU4F2Q12837 409 aa9.94□□□□□ -0.82
SMC5-202ENST00000471372 PAK2Q13177 524 aa9.94□□□□□ -0.82
SMC5-202ENST00000471372 ZIC5Q96T25 663 aa9.94□□□□□ -0.82
SMC5-202ENST00000471372 EREGO14944 169 aa9.93□□□□□ -0.82
SMC5-202ENST00000471372 PPM1GO15355 546 aaPredicted RBP9.93□□□□□ -0.82
SMC5-202ENST00000471372 FGRP09769 529 aa9.93□□□□□ -0.82
SMC5-202ENST00000471372 GJA8P48165 433 aa9.93□□□□□ -0.82
SMC5-202ENST00000471372 ERMP1Q7Z2K6 904 aa9.93□□□□□ -0.82
SMC5-202ENST00000471372 TSEN34Q9BSV6 310 aaKnown RBP9.93□□□□□ -0.82
SMC5-202ENST00000471372 PIF1Q9H611 641 aa9.93□□□□□ -0.82
SMC5-202ENST00000471372 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
SMC5-202ENST00000471372 GADD45BO75293 160 aaPredicted RBP9.92□□□□□ -0.82
SMC5-202ENST00000471372 SMPD1P17405 629 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 ARSJQ5FYB0 599 aaPredicted RBP9.92□□□□□ -0.82
SMC5-202ENST00000471372 PRICKLE2Q7Z3G6 844 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 VPS37DQ86XT2 251 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 GALNT12Q8IXK2 581 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 C1orf127Q8N9H9 656 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 SRCIN1Q9C0H9 1055 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 NEUROD4Q9HD90 331 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 AAASQ9NRG9 546 aa9.92□□□□□ -0.82
SMC5-202ENST00000471372 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
SMC5-202ENST00000471372 XYLBO75191 536 aa9.9□□□□□ -0.82
SMC5-202ENST00000471372 ATF4P18848 351 aaPredicted RBP9.9□□□□□ -0.82
SMC5-202ENST00000471372 TYRO3Q06418 890 aa9.9□□□□□ -0.82
SMC5-202ENST00000471372 GRM2Q14416 872 aa9.9□□□□□ -0.82
SMC5-202ENST00000471372 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.82
SMC5-202ENST00000471372 HPS1Q92902 700 aa9.9□□□□□ -0.82
SMC5-202ENST00000471372 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMC5-202ENST00000471372 KBTBD4Q9NVX7 518 aa9.9□□□□□ -0.82
SMC5-202ENST00000471372 STK10O94804 968 aaKnown RBP9.89□□□□□ -0.83
SMC5-202ENST00000471372 ZNF662Q6ZS27 426 aa9.89□□□□□ -0.83
SMC5-202ENST00000471372 RNF217Q8TC41 542 aa9.89□□□□□ -0.83
SMC5-202ENST00000471372 GPRASP2Q96D09 838 aa9.89□□□□□ -0.83
SMC5-202ENST00000471372 SUV39H2Q9H5I1 410 aa9.89□□□□□ -0.83
SMC5-202ENST00000471372 ZSWIM4Q9H7M6 989 aa9.89□□□□□ -0.83
SMC5-202ENST00000471372 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
SMC5-202ENST00000471372 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
SMC5-202ENST00000471372 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
SMC5-202ENST00000471372 MSX1P28360 303 aa9.88□□□□□ -0.83
SMC5-202ENST00000471372 HIRIP3Q9BW71 556 aaPredicted RBP9.88□□□□□ -0.83
SMC5-202ENST00000471372 ABI2Q9NYB9 513 aaPredicted RBP9.88□□□□□ -0.83
SMC5-202ENST00000471372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
SMC5-202ENST00000471372 A0A1W2PNR3 127 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 TLDC2A0PJX2 215 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 F6X3S4 739 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 EPB42P16452 691 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 RHOQP17081 205 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 GLIS3Q8NEA6 775 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 CEP63Q96MT8 703 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 TIMMDC1Q9NPL8 285 aa9.87□□□□□ -0.83
SMC5-202ENST00000471372 TTF2Q9UNY4 1162 aaKnown RBP9.87□□□□□ -0.83
SMC5-202ENST00000471372 GSTT1P30711 240 aa9.86□□□□□ -0.83
SMC5-202ENST00000471372 LYSMD3Q7Z3D4 306 aa9.86□□□□□ -0.83
SMC5-202ENST00000471372 NLRP13Q86W25 1043 aa9.86□□□□□ -0.83
SMC5-202ENST00000471372 CRIPAKQ8N1N5 446 aa9.86□□□□□ -0.83
SMC5-202ENST00000471372 OSBPL2Q9H1P3 480 aa9.86□□□□□ -0.83
SMC5-202ENST00000471372 LATS2Q9NRM7 1088 aa9.86□□□□□ -0.83
SMC5-202ENST00000471372 A0A1B0GTH6 734 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 CYP2E1P05181 493 aaPredicted RBP9.85□□□□□ -0.83
SMC5-202ENST00000471372 CES1P23141 567 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 VEGFBP49765 207 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 WDR44Q5JSH3 913 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 SOGA3Q5TF21 947 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 C3orf58Q8NDZ4 430 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 TRIM56Q9BRZ2 755 aaKnown RBP9.85□□□□□ -0.83
SMC5-202ENST00000471372 SPON2Q9BUD6 331 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 TBX22Q9Y458 520 aa9.85□□□□□ -0.83
SMC5-202ENST00000471372 UPP2O95045 317 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 EGFRP00533 1210 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 AVPP01185 164 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 BMP2P12643 396 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 NCLP19338 710 aaKnown RBP9.84□□□□□ -0.83
SMC5-202ENST00000471372 C6orf118Q5T5N4 469 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 RASGRP4Q8TDF6 673 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 NOC4LQ9BVI4 516 aaKnown RBP9.84□□□□□ -0.83
SMC5-202ENST00000471372 EHD4Q9H223 541 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 KANSL3Q9P2N6 904 aa9.84□□□□□ -0.83
SMC5-202ENST00000471372 ADAMTS1Q9UHI8 967 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms