RNA–Protein interactions for RNA: ENST00000471042.1

LAMA5-207, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-207ENST00000471042 PLIN1O60240 522 aa17.83■□□□□ 0.44
LAMA5-207ENST00000471042 RASSF7Q02833 373 aa17.83■□□□□ 0.44
LAMA5-207ENST00000471042 INTS3Q68E01 1043 aaKnown RBP17.83■□□□□ 0.44
LAMA5-207ENST00000471042 CNKSR1Q969H4 720 aa17.83■□□□□ 0.44
LAMA5-207ENST00000471042 MASTLQ96GX5 879 aa17.83■□□□□ 0.44
LAMA5-207ENST00000471042 PDE8AO60658 829 aa17.82■□□□□ 0.44
LAMA5-207ENST00000471042 NPR1P16066 1061 aa17.82■□□□□ 0.44
LAMA5-207ENST00000471042 RNF181Q9P0P0 153 aa17.82■□□□□ 0.44
LAMA5-207ENST00000471042 C3orf67Q6ZVT6 689 aa17.81■□□□□ 0.44
LAMA5-207ENST00000471042 ITPRIPQ8IWB1 547 aa17.81■□□□□ 0.44
LAMA5-207ENST00000471042 TMEM57Q8N5G2 664 aa17.81■□□□□ 0.44
LAMA5-207ENST00000471042 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
LAMA5-207ENST00000471042 NFKBIEO00221 500 aa17.8■□□□□ 0.44
LAMA5-207ENST00000471042 NBPF7P0C2Y1 421 aaPredicted RBP17.8■□□□□ 0.44
LAMA5-207ENST00000471042 CASP7P55210 303 aa17.8■□□□□ 0.44
LAMA5-207ENST00000471042 CRY2Q49AN0 593 aa17.8■□□□□ 0.44
LAMA5-207ENST00000471042 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
LAMA5-207ENST00000471042 USP44Q9H0E7 712 aa17.8■□□□□ 0.44
LAMA5-207ENST00000471042 DDX60Q8IY21 1712 aaKnown RBP17.8■□□□□ 0.44
LAMA5-207ENST00000471042 ZC3H4Q9UPT8 1303 aaKnown RBP17.79■□□□□ 0.44
LAMA5-207ENST00000471042 C21orf2O43822 256 aa17.79■□□□□ 0.44
LAMA5-207ENST00000471042 RLBP1P12271 317 aa17.79■□□□□ 0.44
LAMA5-207ENST00000471042 PRELPP51888 382 aa17.79■□□□□ 0.44
LAMA5-207ENST00000471042 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
LAMA5-207ENST00000471042 UTYO14607 1347 aa17.78■□□□□ 0.44
LAMA5-207ENST00000471042 UBTFL1P0CB47 393 aaPredicted RBP17.78■□□□□ 0.44
LAMA5-207ENST00000471042 LMNB1P20700 586 aa17.78■□□□□ 0.44
LAMA5-207ENST00000471042 ALDH1B1P30837 517 aa17.78■□□□□ 0.44
LAMA5-207ENST00000471042 CTSWP56202 376 aa17.78■□□□□ 0.44
LAMA5-207ENST00000471042 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
LAMA5-207ENST00000471042 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
LAMA5-207ENST00000471042 DDX46Q7L014 1031 aaKnown RBP17.78■□□□□ 0.44
LAMA5-207ENST00000471042 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
LAMA5-207ENST00000471042 PLA2G12BQ9BX93 195 aa17.78■□□□□ 0.44
LAMA5-207ENST00000471042 HDAC5Q9UQL6 1122 aa17.78■□□□□ 0.44
LAMA5-207ENST00000471042 LTBP3Q9NS15 1303 aa17.77■□□□□ 0.44
LAMA5-207ENST00000471042 KIF3CO14782 793 aa17.77■□□□□ 0.44
LAMA5-207ENST00000471042 GNAI3P08754 354 aa17.77■□□□□ 0.44
LAMA5-207ENST00000471042 RRP1P56182 461 aaKnown RBP17.77■□□□□ 0.44
LAMA5-207ENST00000471042 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
LAMA5-207ENST00000471042 SUCLG2Q96I99 432 aa17.77■□□□□ 0.44
LAMA5-207ENST00000471042 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
LAMA5-207ENST00000471042 HOXA10P31260 410 aaPredicted RBP17.76■□□□□ 0.43
LAMA5-207ENST00000471042 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
LAMA5-207ENST00000471042 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
LAMA5-207ENST00000471042 CRAMP1Q96RY5 1269 aa17.76■□□□□ 0.43
LAMA5-207ENST00000471042 MEIS3Q99687 375 aa17.76■□□□□ 0.43
LAMA5-207ENST00000471042 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
LAMA5-207ENST00000471042 TAF1P21675 1872 aa17.75■□□□□ 0.43
LAMA5-207ENST00000471042 C7orf43Q8WVR3 580 aa17.75■□□□□ 0.43
LAMA5-207ENST00000471042 COG6Q9Y2V7 657 aa17.75■□□□□ 0.43
LAMA5-207ENST00000471042 WDR90Q96KV7 1748 aa17.75■□□□□ 0.43
LAMA5-207ENST00000471042 FOXO4P98177 505 aa17.74■□□□□ 0.43
LAMA5-207ENST00000471042 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
LAMA5-207ENST00000471042 C20orf194Q5TEA3 1177 aa17.74■□□□□ 0.43
LAMA5-207ENST00000471042 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
LAMA5-207ENST00000471042 TAOK3Q9H2K8 898 aa17.74■□□□□ 0.43
LAMA5-207ENST00000471042 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
LAMA5-207ENST00000471042 KDM2BQ8NHM5 1336 aa17.73■□□□□ 0.43
LAMA5-207ENST00000471042 GRAPQ13588 217 aa17.73■□□□□ 0.43
LAMA5-207ENST00000471042 EPHA10Q5JZY3 1008 aa17.73■□□□□ 0.43
LAMA5-207ENST00000471042 GRAPLQ8TC17 118 aaPredicted RBP17.73■□□□□ 0.43
LAMA5-207ENST00000471042 GREM2Q9H772 168 aa17.73■□□□□ 0.43
LAMA5-207ENST00000471042 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
LAMA5-207ENST00000471042 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
LAMA5-207ENST00000471042 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
LAMA5-207ENST00000471042 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
LAMA5-207ENST00000471042 CSF1RP07333 972 aa17.72■□□□□ 0.43
LAMA5-207ENST00000471042 FAM161AQ3B820 660 aa17.72■□□□□ 0.43
LAMA5-207ENST00000471042 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
LAMA5-207ENST00000471042 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
LAMA5-207ENST00000471042 TMX4Q9H1E5 349 aaPredicted RBP17.72■□□□□ 0.43
LAMA5-207ENST00000471042 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
LAMA5-207ENST00000471042 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
LAMA5-207ENST00000471042 DDX19BQ9UMR2 479 aa17.72■□□□□ 0.43
LAMA5-207ENST00000471042 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
LAMA5-207ENST00000471042 ANKRD18BA2A2Z9 1011 aa17.71■□□□□ 0.43
LAMA5-207ENST00000471042 BBOX1O75936 387 aa17.71■□□□□ 0.43
LAMA5-207ENST00000471042 GNAI2P04899 355 aa17.71■□□□□ 0.43
LAMA5-207ENST00000471042 ITGA6P23229 1130 aa17.71■□□□□ 0.43
LAMA5-207ENST00000471042 IFIT5Q13325 482 aaKnown RBP17.71■□□□□ 0.43
LAMA5-207ENST00000471042 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
LAMA5-207ENST00000471042 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
LAMA5-207ENST00000471042 KAZALD1Q96I82 304 aa17.71■□□□□ 0.43
LAMA5-207ENST00000471042 MYH3P11055 1940 aa17.7■□□□□ 0.42
LAMA5-207ENST00000471042 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
LAMA5-207ENST00000471042 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
LAMA5-207ENST00000471042 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
LAMA5-207ENST00000471042 RPS8P62241 208 aaKnown RBP17.7■□□□□ 0.42
LAMA5-207ENST00000471042 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
LAMA5-207ENST00000471042 ANKRD44Q8N8A2 993 aa17.7■□□□□ 0.42
LAMA5-207ENST00000471042 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
LAMA5-207ENST00000471042 LRRC37AA6NMS7 1700 aa17.69■□□□□ 0.42
LAMA5-207ENST00000471042 GLTPD2A6NH11 291 aa17.69■□□□□ 0.42
LAMA5-207ENST00000471042 IGHMBP2P38935 993 aaKnown RBP17.69■□□□□ 0.42
LAMA5-207ENST00000471042 RABL6Q3YEC7 729 aaPredicted RBP17.69■□□□□ 0.42
LAMA5-207ENST00000471042 TMC4Q7Z404 712 aa17.69■□□□□ 0.42
LAMA5-207ENST00000471042 SCN4AP35499 1836 aa17.69■□□□□ 0.42
LAMA5-207ENST00000471042 TOMM70O94826 608 aa17.68■□□□□ 0.42
LAMA5-207ENST00000471042 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms