RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 ZNF219Q9P2Y4 722 aaPredicted RBP15.72■□□□□ 0.11
SCNM1-205ENST00000471039 NFKBIEO00221 500 aa15.71■□□□□ 0.11
SCNM1-205ENST00000471039 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
SCNM1-205ENST00000471039 CTSWP56202 376 aa15.71■□□□□ 0.11
SCNM1-205ENST00000471039 ARHGAP27Q6ZUM4 889 aa15.71■□□□□ 0.11
SCNM1-205ENST00000471039 SLC51AQ86UW1 340 aa15.71■□□□□ 0.11
SCNM1-205ENST00000471039 C7orf43Q8WVR3 580 aa15.71■□□□□ 0.11
SCNM1-205ENST00000471039 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
SCNM1-205ENST00000471039 API5Q9BZZ5 524 aaKnown RBP15.71■□□□□ 0.11
SCNM1-205ENST00000471039 RTL9Q8NET4 1388 aa15.71■□□□□ 0.11
SCNM1-205ENST00000471039 GRM8O00222 908 aa15.7■□□□□ 0.1
SCNM1-205ENST00000471039 GRAPQ13588 217 aa15.7■□□□□ 0.1
SCNM1-205ENST00000471039 CCDC93Q567U6 631 aa15.7■□□□□ 0.1
SCNM1-205ENST00000471039 SOGA3Q5TF21 947 aa15.7■□□□□ 0.1
SCNM1-205ENST00000471039 OLFM4Q6UX06 510 aa15.7■□□□□ 0.1
SCNM1-205ENST00000471039 DDX46Q7L014 1031 aaKnown RBP15.7■□□□□ 0.1
SCNM1-205ENST00000471039 GRAPLQ8TC17 118 aaPredicted RBP15.7■□□□□ 0.1
SCNM1-205ENST00000471039 PLA2G12BQ9BX93 195 aa15.7■□□□□ 0.1
SCNM1-205ENST00000471039 LTBP3Q9NS15 1303 aa15.69■□□□□ 0.1
SCNM1-205ENST00000471039 CCDC152Q4G0S7 254 aa15.69■□□□□ 0.1
SCNM1-205ENST00000471039 ARHGAP45Q92619 1136 aa15.69■□□□□ 0.1
SCNM1-205ENST00000471039 UTYO14607 1347 aa15.68■□□□□ 0.1
SCNM1-205ENST00000471039 TRIM27P14373 513 aa15.68■□□□□ 0.1
SCNM1-205ENST00000471039 TNNQ9UQP3 1299 aa15.68■□□□□ 0.1
SCNM1-205ENST00000471039 COL4A5P29400 1685 aa15.67■□□□□ 0.1
SCNM1-205ENST00000471039 PSME4Q14997 1843 aa15.67■□□□□ 0.1
SCNM1-205ENST00000471039 CCT4P50991 539 aaKnown RBP15.67■□□□□ 0.1
SCNM1-205ENST00000471039 ATF7IPQ6VMQ6 1270 aa15.67■□□□□ 0.1
SCNM1-205ENST00000471039 TTLL11Q8NHH1 800 aa15.67■□□□□ 0.1
SCNM1-205ENST00000471039 FRAT1Q92837 279 aaPredicted RBP15.67■□□□□ 0.1
SCNM1-205ENST00000471039 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
SCNM1-205ENST00000471039 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
SCNM1-205ENST00000471039 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
SCNM1-205ENST00000471039 C9orf78Q9NZ63 289 aaPredicted RBP15.67■□□□□ 0.1
SCNM1-205ENST00000471039 NBPF7P0C2Y1 421 aaPredicted RBP15.66■□□□□ 0.1
SCNM1-205ENST00000471039 YY1P25490 414 aa15.66■□□□□ 0.1
SCNM1-205ENST00000471039 PRELPP51888 382 aa15.66■□□□□ 0.1
SCNM1-205ENST00000471039 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
SCNM1-205ENST00000471039 GREM2Q9H772 168 aa15.66■□□□□ 0.1
SCNM1-205ENST00000471039 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
SCNM1-205ENST00000471039 ATP6V0A2Q9Y487 856 aa15.66■□□□□ 0.1
SCNM1-205ENST00000471039 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
SCNM1-205ENST00000471039 FOXO4P98177 505 aa15.65■□□□□ 0.1
SCNM1-205ENST00000471039 ZKSCAN2Q63HK3 967 aa15.65■□□□□ 0.1
SCNM1-205ENST00000471039 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
SCNM1-205ENST00000471039 TMC4Q7Z404 712 aa15.65■□□□□ 0.1
SCNM1-205ENST00000471039 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
SCNM1-205ENST00000471039 ZNF646O15015 1829 aaPredicted RBP15.65■□□□□ 0.1
SCNM1-205ENST00000471039 BBOX1O75936 387 aa15.64■□□□□ 0.09
SCNM1-205ENST00000471039 FKBP4Q02790 459 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCNM1-205ENST00000471039 EPHA10Q5JZY3 1008 aa15.64■□□□□ 0.09
SCNM1-205ENST00000471039 C9orf131Q5VYM1 1079 aa15.64■□□□□ 0.09
SCNM1-205ENST00000471039 INTS3Q68E01 1043 aaKnown RBP15.64■□□□□ 0.09
SCNM1-205ENST00000471039 RTKN2Q8IZC4 609 aa15.64■□□□□ 0.09
SCNM1-205ENST00000471039 KAZALD1Q96I82 304 aa15.64■□□□□ 0.09
SCNM1-205ENST00000471039 RNF181Q9P0P0 153 aa15.64■□□□□ 0.09
SCNM1-205ENST00000471039 CSF1RP07333 972 aa15.63■□□□□ 0.09
SCNM1-205ENST00000471039 LMNB1P20700 586 aa15.63■□□□□ 0.09
SCNM1-205ENST00000471039 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
SCNM1-205ENST00000471039 CDC5LQ99459 802 aaKnown RBP15.63■□□□□ 0.09
SCNM1-205ENST00000471039 PSMD1Q99460 953 aa15.63■□□□□ 0.09
SCNM1-205ENST00000471039 USP44Q9H0E7 712 aa15.63■□□□□ 0.09
SCNM1-205ENST00000471039 RCAN3Q9UKA8 241 aa15.63■□□□□ 0.09
SCNM1-205ENST00000471039 ITGA6P23229 1130 aa15.62■□□□□ 0.09
SCNM1-205ENST00000471039 GRIPAP1Q4V328 841 aa15.62■□□□□ 0.09
SCNM1-205ENST00000471039 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
SCNM1-205ENST00000471039 SP8Q8IXZ3 490 aa15.62■□□□□ 0.09
SCNM1-205ENST00000471039 WDR90Q96KV7 1748 aa15.62■□□□□ 0.09
SCNM1-205ENST00000471039 ZC3H4Q9UPT8 1303 aaKnown RBP15.62■□□□□ 0.09
SCNM1-205ENST00000471039 RPS8P62241 208 aaKnown RBP15.61■□□□□ 0.09
SCNM1-205ENST00000471039 RABL6Q3YEC7 729 aaPredicted RBP15.61■□□□□ 0.09
SCNM1-205ENST00000471039 LMBR1LQ6UX01 489 aa15.61■□□□□ 0.09
SCNM1-205ENST00000471039 MEIS3Q99687 375 aa15.61■□□□□ 0.09
SCNM1-205ENST00000471039 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
SCNM1-205ENST00000471039 SCN9AQ15858 1988 aa15.6■□□□□ 0.09
SCNM1-205ENST00000471039 ARAP2Q8WZ64 1704 aa15.6■□□□□ 0.09
SCNM1-205ENST00000471039 RLBP1P12271 317 aa15.6■□□□□ 0.09
SCNM1-205ENST00000471039 FTSJ3Q8IY81 847 aaKnown RBP15.6■□□□□ 0.09
SCNM1-205ENST00000471039 TMEM57Q8N5G2 664 aa15.6■□□□□ 0.09
SCNM1-205ENST00000471039 ANKRD44Q8N8A2 993 aa15.6■□□□□ 0.09
SCNM1-205ENST00000471039 TMX4Q9H1E5 349 aaPredicted RBP15.6■□□□□ 0.09
SCNM1-205ENST00000471039 ZNF277Q9NRM2 450 aaPredicted RBP15.6■□□□□ 0.09
SCNM1-205ENST00000471039 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
SCNM1-205ENST00000471039 MYH13Q9UKX3 1938 aa15.59■□□□□ 0.09
SCNM1-205ENST00000471039 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
SCNM1-205ENST00000471039 UBTFL1P0CB47 393 aaPredicted RBP15.59■□□□□ 0.09
SCNM1-205ENST00000471039 IARSP41252 1262 aaKnown RBP15.59■□□□□ 0.09
SCNM1-205ENST00000471039 DPP8Q6V1X1 898 aaPredicted RBP15.59■□□□□ 0.09
SCNM1-205ENST00000471039 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
SCNM1-205ENST00000471039 RTFDC1Q9BY42 306 aaPredicted RBP15.59■□□□□ 0.09
SCNM1-205ENST00000471039 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
SCNM1-205ENST00000471039 GPSM2P81274 684 aa15.58■□□□□ 0.08
SCNM1-205ENST00000471039 IFIT5Q13325 482 aaKnown RBP15.58■□□□□ 0.08
SCNM1-205ENST00000471039 MPNDQ8N594 471 aa15.58■□□□□ 0.08
SCNM1-205ENST00000471039 SCN4AP35499 1836 aa15.58■□□□□ 0.08
SCNM1-205ENST00000471039 CCDC57Q2TAC2 916 aa15.57■□□□□ 0.08
SCNM1-205ENST00000471039 SUPT20HQ8NEM7 779 aa15.57■□□□□ 0.08
SCNM1-205ENST00000471039 BSDC1Q9NW68 430 aaPredicted RBP15.57■□□□□ 0.08
SCNM1-205ENST00000471039 GNAI3P08754 354 aa15.56■□□□□ 0.08
SCNM1-205ENST00000471039 ZNF784Q8NCA9 323 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 356.4 ms