RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 TCIRG1Q13488 830 aa18.12■□□□□ 0.49
SEMA3F-208ENST00000470737 TNIP1Q15025 636 aa18.12■□□□□ 0.49
SEMA3F-208ENST00000470737 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
SEMA3F-208ENST00000470737 TRAF5O00463 557 aa18.11■□□□□ 0.49
SEMA3F-208ENST00000470737 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
SEMA3F-208ENST00000470737 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
SEMA3F-208ENST00000470737 GRAPQ13588 217 aa18.11■□□□□ 0.49
SEMA3F-208ENST00000470737 TMC4Q7Z404 712 aa18.11■□□□□ 0.49
SEMA3F-208ENST00000470737 GRAPLQ8TC17 118 aaPredicted RBP18.11■□□□□ 0.49
SEMA3F-208ENST00000470737 LAS1LQ9Y4W2 734 aaKnown RBP18.11■□□□□ 0.49
SEMA3F-208ENST00000470737 CDHR2Q9BYE9 1310 aa18.1■□□□□ 0.49
SEMA3F-208ENST00000470737 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
SEMA3F-208ENST00000470737 GMPSP49915 693 aaPredicted RBP18.1■□□□□ 0.49
SEMA3F-208ENST00000470737 CYP4F22Q6NT55 531 aa18.1■□□□□ 0.49
SEMA3F-208ENST00000470737 GPR101Q96P66 508 aaPredicted RBP18.1■□□□□ 0.49
SEMA3F-208ENST00000470737 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
SEMA3F-208ENST00000470737 THSD7BQ9C0I4 1608 aa18.09■□□□□ 0.49
SEMA3F-208ENST00000470737 RAD17O75943 681 aa18.09■□□□□ 0.49
SEMA3F-208ENST00000470737 TAF1P21675 1872 aa18.08■□□□□ 0.49
SEMA3F-208ENST00000470737 CELF2O95319 508 aaKnown RBP18.08■□□□□ 0.48
SEMA3F-208ENST00000470737 CST9Q5W186 159 aa18.08■□□□□ 0.48
SEMA3F-208ENST00000470737 CCDC146Q8IYE0 955 aa18.08■□□□□ 0.48
SEMA3F-208ENST00000470737 CHL1O00533 1208 aa18.07■□□□□ 0.48
SEMA3F-208ENST00000470737 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
SEMA3F-208ENST00000470737 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
SEMA3F-208ENST00000470737 ZC3H15Q8WU90 426 aaKnown RBP18.07■□□□□ 0.48
SEMA3F-208ENST00000470737 CHPF2Q9P2E5 772 aa18.07■□□□□ 0.48
SEMA3F-208ENST00000470737 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
SEMA3F-208ENST00000470737 H7C1D1 291 aa18.06■□□□□ 0.48
SEMA3F-208ENST00000470737 MAP2K2P36507 400 aa18.06■□□□□ 0.48
SEMA3F-208ENST00000470737 PLBD2Q8NHP8 589 aa18.06■□□□□ 0.48
SEMA3F-208ENST00000470737 GLIS2Q9BZE0 524 aaPredicted RBP18.06■□□□□ 0.48
SEMA3F-208ENST00000470737 ZNF408Q9H9D4 720 aa18.06■□□□□ 0.48
SEMA3F-208ENST00000470737 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
SEMA3F-208ENST00000470737 HOXB7P09629 217 aa18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 KRT24Q2M2I5 525 aa18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 ANKRD13DQ6ZTN6 518 aa18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 ABHD8Q96I13 439 aa18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 DBF4Q9UBU7 674 aaPredicted RBP18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 CNOT7Q9UIV1 285 aaKnown RBP18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 LRRC37AA6NMS7 1700 aa18.05■□□□□ 0.48
SEMA3F-208ENST00000470737 WASHC4Q2M389 1173 aa18.04■□□□□ 0.48
SEMA3F-208ENST00000470737 CDC37L1Q7L3B6 337 aa18.04■□□□□ 0.48
SEMA3F-208ENST00000470737 SAPCD2Q86UD0 394 aa18.04■□□□□ 0.48
SEMA3F-208ENST00000470737 ZNF428Q96B54 188 aa18.04■□□□□ 0.48
SEMA3F-208ENST00000470737 PGAP2Q9UHJ9 254 aa18.04■□□□□ 0.48
SEMA3F-208ENST00000470737 AOC2O75106 756 aa18.03■□□□□ 0.48
SEMA3F-208ENST00000470737 HHIPL1Q96JK4 782 aa18.03■□□□□ 0.48
SEMA3F-208ENST00000470737 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
SEMA3F-208ENST00000470737 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
SEMA3F-208ENST00000470737 YDJCA8MPS7 323 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 ATP5J2-PTCD1G3V325 749 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 C6orf229H3BNL8 230 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 CA12O43570 354 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 MICALL2Q8IY33 904 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 TRPM4Q8TD43 1214 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 FAM89AQ96GI7 184 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 EYA3Q99504 573 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 ISCA1Q9BUE6 129 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 DUOX1Q9NRD9 1551 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 TRIM35Q9UPQ4 493 aa18.02■□□□□ 0.48
SEMA3F-208ENST00000470737 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
SEMA3F-208ENST00000470737 HIRAP54198 1017 aaPredicted RBP18.01■□□□□ 0.47
SEMA3F-208ENST00000470737 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
SEMA3F-208ENST00000470737 DPF2Q92785 391 aa18.01■□□□□ 0.47
SEMA3F-208ENST00000470737 CELF1Q92879 486 aaKnown RBP18.01■□□□□ 0.47
SEMA3F-208ENST00000470737 PSMD14O00487 310 aa18■□□□□ 0.47
SEMA3F-208ENST00000470737 HSP90B1P14625 803 aaKnown RBP18■□□□□ 0.47
SEMA3F-208ENST00000470737 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
SEMA3F-208ENST00000470737 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
SEMA3F-208ENST00000470737 DBNDD1Q9H9R9 158 aa18■□□□□ 0.47
SEMA3F-208ENST00000470737 TSKSQ9UJT2 592 aa18■□□□□ 0.47
SEMA3F-208ENST00000470737 ZBTB12Q9Y330 459 aaPredicted RBP18■□□□□ 0.47
SEMA3F-208ENST00000470737 IRS4O14654 1257 aaPredicted RBP17.99■□□□□ 0.47
SEMA3F-208ENST00000470737 RPS12P25398 132 aaKnown RBP17.99■□□□□ 0.47
SEMA3F-208ENST00000470737 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
SEMA3F-208ENST00000470737 GOLGA2Q08379 1002 aa17.99■□□□□ 0.47
SEMA3F-208ENST00000470737 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
SEMA3F-208ENST00000470737 USP48Q86UV5 1035 aa17.99■□□□□ 0.47
SEMA3F-208ENST00000470737 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
SEMA3F-208ENST00000470737 SHTN1A0MZ66 631 aa17.98■□□□□ 0.47
SEMA3F-208ENST00000470737 CCDC85CA6NKD9 419 aa17.98■□□□□ 0.47
SEMA3F-208ENST00000470737 G3V3G9 751 aa17.98■□□□□ 0.47
SEMA3F-208ENST00000470737 ECE2O60344 883 aa17.98■□□□□ 0.47
SEMA3F-208ENST00000470737 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
SEMA3F-208ENST00000470737 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
SEMA3F-208ENST00000470737 POLR2AP24928 1970 aaKnown RBP17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 HUNKP57058 714 aa17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 RPS8P62241 208 aaKnown RBP17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 GPSM2P81274 684 aa17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 NOGQ13253 232 aa17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 TRIM28Q13263 835 aaKnown RBP17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 SAMD7Q7Z3H4 446 aa17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 KRT26Q7Z3Y9 468 aa17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 DCPSQ96C86 337 aaKnown RBP17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 POLLQ9UGP5 575 aa17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 ADAMTS8Q9UP79 889 aa17.97■□□□□ 0.47
SEMA3F-208ENST00000470737 DOK7Q18PE1 504 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms