RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
NXF3-205ENST00000470724 COL11A2P13942 1736 aaPredicted RBP12.17□□□□□ -0.46
NXF3-205ENST00000470724 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
NXF3-205ENST00000470724 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
NXF3-205ENST00000470724 CCT4P50991 539 aaKnown RBP12.16□□□□□ -0.46
NXF3-205ENST00000470724 FKBP4Q02790 459 aaKnown RBP eCLIP12.16□□□□□ -0.46
NXF3-205ENST00000470724 TAF7LQ5H9L4 462 aa12.16□□□□□ -0.46
NXF3-205ENST00000470724 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
NXF3-205ENST00000470724 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
NXF3-205ENST00000470724 SLC51AQ86UW1 340 aa12.16□□□□□ -0.46
NXF3-205ENST00000470724 ANKRD18AQ8IVF6 992 aa12.16□□□□□ -0.46
NXF3-205ENST00000470724 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
NXF3-205ENST00000470724 ZNF277Q9NRM2 450 aaPredicted RBP12.16□□□□□ -0.46
NXF3-205ENST00000470724 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
NXF3-205ENST00000470724 IGHMBP2P38935 993 aaKnown RBP12.15□□□□□ -0.46
NXF3-205ENST00000470724 RPS8P62241 208 aaKnown RBP12.15□□□□□ -0.46
NXF3-205ENST00000470724 ZKSCAN2Q63HK3 967 aa12.15□□□□□ -0.46
NXF3-205ENST00000470724 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
NXF3-205ENST00000470724 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
NXF3-205ENST00000470724 GREM2Q9H772 168 aa12.15□□□□□ -0.46
NXF3-205ENST00000470724 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 TMC4Q7Z404 712 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 MPNDQ8N594 471 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 TTLL11Q8NHH1 800 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 C7orf43Q8WVR3 580 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 MPHOSPH8Q99549 860 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 ANKIB1Q9P2G1 1089 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
NXF3-205ENST00000470724 UTRNP46939 3433 aa12.14□□□□□ -0.47
NXF3-205ENST00000470724 ANKRD18BA2A2Z9 1011 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 G3V3G9 751 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 C6orf229H3BNL8 230 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 NBPF7P0C2Y1 421 aaPredicted RBP12.13□□□□□ -0.47
NXF3-205ENST00000470724 UBTFL1P0CB47 393 aaPredicted RBP12.13□□□□□ -0.47
NXF3-205ENST00000470724 ITGA6P23229 1130 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 CCDC57Q2TAC2 916 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 ZNF784Q8NCA9 323 aaPredicted RBP12.13□□□□□ -0.47
NXF3-205ENST00000470724 SUPT20HQ8NEM7 779 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 JDP2Q8WYK2 163 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 SUCLG2Q96I99 432 aa12.13□□□□□ -0.47
NXF3-205ENST00000470724 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
NXF3-205ENST00000470724 GOLGB1Q14789 3259 aaKnown RBP12.13□□□□□ -0.47
NXF3-205ENST00000470724 IARSP41252 1262 aaKnown RBP12.12□□□□□ -0.47
NXF3-205ENST00000470724 CASP7P55210 303 aa12.12□□□□□ -0.47
NXF3-205ENST00000470724 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
NXF3-205ENST00000470724 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
NXF3-205ENST00000470724 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
NXF3-205ENST00000470724 TNNQ9UQP3 1299 aa12.12□□□□□ -0.47
NXF3-205ENST00000470724 DLEC1Q9Y238 1755 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 TRIM27P14373 513 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 PRELPP51888 382 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
NXF3-205ENST00000470724 GPSM2P81274 684 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 AOC3Q16853 763 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 ITPRIPQ8IWB1 547 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 PLA2G12BQ9BX93 195 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
NXF3-205ENST00000470724 RCAN3Q9UKA8 241 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
NXF3-205ENST00000470724 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 PLIN1O60240 522 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 UFL1O94874 794 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 KCNJ4P48050 445 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 FOXO4P98177 505 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 ZNF594Q96JF6 807 aaPredicted RBP12.1□□□□□ -0.47
NXF3-205ENST00000470724 GPR101Q96P66 508 aaPredicted RBP12.1□□□□□ -0.47
NXF3-205ENST00000470724 PSMD1Q99460 953 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 CNNM1Q9NRU3 951 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 GGA1Q9UJY5 639 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
NXF3-205ENST00000470724 CSF1RP07333 972 aa12.09□□□□□ -0.47
NXF3-205ENST00000470724 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
NXF3-205ENST00000470724 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
NXF3-205ENST00000470724 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
NXF3-205ENST00000470724 EYA3Q99504 573 aa12.09□□□□□ -0.47
NXF3-205ENST00000470724 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
NXF3-205ENST00000470724 HDAC5Q9UQL6 1122 aa12.09□□□□□ -0.47
NXF3-205ENST00000470724 GJA3Q9Y6H8 435 aa12.09□□□□□ -0.47
NXF3-205ENST00000470724 BRCA1P38398 1863 aaKnown RBP12.08□□□□□ -0.48
NXF3-205ENST00000470724 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
NXF3-205ENST00000470724 LDHAL6AQ6ZMR3 332 aa12.08□□□□□ -0.48
NXF3-205ENST00000470724 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
NXF3-205ENST00000470724 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
NXF3-205ENST00000470724 MEIS3Q99687 375 aa12.08□□□□□ -0.48
NXF3-205ENST00000470724 BSDC1Q9NW68 430 aaPredicted RBP12.08□□□□□ -0.48
NXF3-205ENST00000470724 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
NXF3-205ENST00000470724 ARFGEF1Q9Y6D6 1849 aa12.08□□□□□ -0.48
NXF3-205ENST00000470724 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.48
NXF3-205ENST00000470724 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
NXF3-205ENST00000470724 XDHP47989 1333 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms