RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 PDE4AP27815 886 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 G3BP1Q13283 466 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDLBP-233ENST00000470710 FAM161AQ3B820 660 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 ERFEQ4G0M1 354 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 SKAP1Q86WV1 359 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 NUTM1Q86Y26 1132 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 NLGN1Q8N2Q7 840 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 COL24A1Q17RW2 1714 aa10.77□□□□□ -0.69
HDLBP-233ENST00000470710 RIC1Q4ADV7 1423 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 CIAO1O76071 339 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 RGS3P49796 1198 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 IFIT5Q13325 482 aaKnown RBP10.76□□□□□ -0.69
HDLBP-233ENST00000470710 OS9Q13438 667 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-233ENST00000470710 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
HDLBP-233ENST00000470710 CCDC57Q2TAC2 916 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 CCDC152Q4G0S7 254 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 RHPN1Q8TCX5 695 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 GREM2Q9H772 168 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 ABCC12Q96J65 1359 aa10.76□□□□□ -0.69
HDLBP-233ENST00000470710 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
HDLBP-233ENST00000470710 EYA2O00167 538 aa10.75□□□□□ -0.69
HDLBP-233ENST00000470710 APBB1O00213 710 aa10.75□□□□□ -0.69
HDLBP-233ENST00000470710 POLRMTO00411 1230 aaKnown RBP10.75□□□□□ -0.69
HDLBP-233ENST00000470710 SMARCA5O60264 1052 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-233ENST00000470710 ITGA6P23229 1130 aa10.75□□□□□ -0.69
HDLBP-233ENST00000470710 GTF2E1P29083 439 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-233ENST00000470710 DDR1Q08345 913 aa10.75□□□□□ -0.69
HDLBP-233ENST00000470710 CNBD1Q8NA66 436 aa10.75□□□□□ -0.69
HDLBP-233ENST00000470710 KLHDC4Q8TBB5 520 aa10.75□□□□□ -0.69
HDLBP-233ENST00000470710 SASH1O94885 1247 aa10.74□□□□□ -0.69
HDLBP-233ENST00000470710 SERPINB2P05120 415 aa10.74□□□□□ -0.69
HDLBP-233ENST00000470710 IL15P40933 162 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-233ENST00000470710 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDLBP-233ENST00000470710 SIL1Q9H173 461 aa10.74□□□□□ -0.69
HDLBP-233ENST00000470710 ST5P78524 1137 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 TAF7LQ5H9L4 462 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 PRR5LQ6MZQ0 368 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 ATG9AQ7Z3C6 839 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 CLASRPQ8N2M8 674 aaKnown RBP10.73□□□□□ -0.69
HDLBP-233ENST00000470710 NLRP3Q96P20 1036 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 CCDC85AQ96PX6 553 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-233ENST00000470710 IL1RAPL2Q9NP60 686 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 SALL3Q9BXA9 1300 aa10.73□□□□□ -0.69
HDLBP-233ENST00000470710 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 LAMB2P55268 1798 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 TUBGCP6Q96RT7 1819 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 NPHP1O15259 732 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 C16orf71Q8IYS4 520 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-233ENST00000470710 OTUD7AQ8TE49 926 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-233ENST00000470710 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 ZNF594Q96JF6 807 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-233ENST00000470710 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
HDLBP-233ENST00000470710 OSBPL3Q9H4L5 887 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 GPR108Q9NPR9 543 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 STAP2Q9UGK3 403 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 AOX1Q06278 1338 aa10.72□□□□□ -0.69
HDLBP-233ENST00000470710 KLRG2A4D1S0 409 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-233ENST00000470710 LRP5O75197 1615 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 MMP10P09238 476 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 MX1P20591 662 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 PDE1AP54750 535 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 TFCP2Q12800 502 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 LRRC24Q50LG9 513 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 LDHAL6AQ6ZMR3 332 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 DDX60Q8IY21 1712 aaKnown RBP10.71□□□□□ -0.69
HDLBP-233ENST00000470710 PUS3Q9BZE2 481 aaKnown RBP10.71□□□□□ -0.69
HDLBP-233ENST00000470710 SEC31BQ9NQW1 1179 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 RIPOR2Q9Y4F9 1068 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 PARP3Q9Y6F1 533 aa10.71□□□□□ -0.69
HDLBP-233ENST00000470710 IFIT2P09913 472 aaKnown RBP10.7□□□□□ -0.7
HDLBP-233ENST00000470710 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
HDLBP-233ENST00000470710 CRY2Q49AN0 593 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 BMP2KLQ5H9B9 411 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 AACSQ86V21 672 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 EAF2Q96CJ1 260 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-233ENST00000470710 BRIP1Q9BX63 1249 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 CNNM1Q9NRU3 951 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-233ENST00000470710 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 FPGT-TNNI3KV9GXZ4 949 aa10.7□□□□□ -0.7
HDLBP-233ENST00000470710 TTC41PQ6P2S7 1318 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 MROH5Q6ZUA9 1318 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 MYH3P11055 1940 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 TTC22Q5TAA0 569 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 DDX46Q7L014 1031 aaKnown RBP10.69□□□□□ -0.7
HDLBP-233ENST00000470710 ANKRD18AQ8IVF6 992 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 CCDC24Q8N4L8 307 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 MPHOSPH8Q99549 860 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 BSDC1Q9NW68 430 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-233ENST00000470710 AKAP2Q9Y2D5 859 aa10.69□□□□□ -0.7
HDLBP-233ENST00000470710 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-233ENST00000470710 NRXN2Q9P2S2 1712 aa10.68□□□□□ -0.7
HDLBP-233ENST00000470710 HOXA10P31260 410 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms