RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 PCSK7Q16549 785 aa5.3□□□□□ -1.56
UBXN4-206ENST00000470687 IER5Q5VY09 327 aa5.3□□□□□ -1.56
UBXN4-206ENST00000470687 AKTIPQ9H8T0 292 aa5.3□□□□□ -1.56
UBXN4-206ENST00000470687 SLAIN2Q9P270 581 aa5.3□□□□□ -1.56
UBXN4-206ENST00000470687 MAP3K6O95382 1288 aa5.29□□□□□ -1.56
UBXN4-206ENST00000470687 MED26O95402 600 aa5.29□□□□□ -1.56
UBXN4-206ENST00000470687 GRNP28799 593 aaKnown RBP5.29□□□□□ -1.56
UBXN4-206ENST00000470687 ATP1A2P50993 1020 aa5.29□□□□□ -1.56
UBXN4-206ENST00000470687 KANK4Q5T7N3 995 aaPredicted RBP5.29□□□□□ -1.56
UBXN4-206ENST00000470687 ELMSAN1Q6PJG2 1045 aa5.29□□□□□ -1.56
UBXN4-206ENST00000470687 STAG2Q8N3U4 1231 aa5.29□□□□□ -1.56
UBXN4-206ENST00000470687 TRPM4Q8TD43 1214 aa5.29□□□□□ -1.56
UBXN4-206ENST00000470687 TTC9Q92623 222 aa5.29□□□□□ -1.56
UBXN4-206ENST00000470687 ARID1BQ8NFD5 2236 aaPredicted RBP5.28□□□□□ -1.56
UBXN4-206ENST00000470687 CARNS1A5YM72 827 aa5.28□□□□□ -1.56
UBXN4-206ENST00000470687 ZBTB42B2RXF5 422 aa5.28□□□□□ -1.56
UBXN4-206ENST00000470687 TGFBR3LH3BV60 316 aa5.28□□□□□ -1.56
UBXN4-206ENST00000470687 ALX3O95076 343 aa5.28□□□□□ -1.56
UBXN4-206ENST00000470687 GP2P55259 537 aaKnown RBP5.28□□□□□ -1.56
UBXN4-206ENST00000470687 DHX32Q7L7V1 743 aaKnown RBP5.28□□□□□ -1.56
UBXN4-206ENST00000470687 TSEN2Q8NCE0 465 aaKnown RBP5.28□□□□□ -1.56
UBXN4-206ENST00000470687 C2orf49Q9BVC5 232 aaPredicted RBP5.28□□□□□ -1.56
UBXN4-206ENST00000470687 ZFATQ9P243 1243 aa5.28□□□□□ -1.56
UBXN4-206ENST00000470687 DMGDHQ9UI17 866 aaKnown RBP5.28□□□□□ -1.56
UBXN4-206ENST00000470687 RNF114Q9Y508 228 aa5.28□□□□□ -1.56
UBXN4-206ENST00000470687 PALM3A6NDB9 673 aaPredicted RBP5.27□□□□□ -1.57
UBXN4-206ENST00000470687 F8W735 103 aaPredicted RBP5.27□□□□□ -1.57
UBXN4-206ENST00000470687 TGFB1P01137 390 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 GPLD1P80108 840 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 MLLT1Q03111 559 aaPredicted RBP5.27□□□□□ -1.57
UBXN4-206ENST00000470687 Q6ZS46 218 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 PLEKHM2Q8IWE5 1019 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 TMEM130Q8N3G9 435 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 NGLY1Q96IV0 654 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 PPP1R12CQ9BZL4 782 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 MRPL18Q9H0U6 180 aaKnown RBP5.27□□□□□ -1.57
UBXN4-206ENST00000470687 TFIP11Q9UBB9 837 aaKnown RBP5.27□□□□□ -1.57
UBXN4-206ENST00000470687 BCS1LQ9Y276 419 aa5.27□□□□□ -1.57
UBXN4-206ENST00000470687 USP17L3A6NCW0 530 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 USP17L4A6NCW7 530 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 GSC2O15499 205 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 PTCD1O75127 700 aaKnown RBP5.26□□□□□ -1.57
UBXN4-206ENST00000470687 FZD5Q13467 585 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 USP17L2Q6R6M4 530 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 USP17L1Q7RTZ2 530 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 SIX5Q8N196 739 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 LARGE2Q8N3Y3 721 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 SMG9Q9H0W8 520 aaKnown RBP5.26□□□□□ -1.57
UBXN4-206ENST00000470687 MAFBQ9Y5Q3 323 aaPredicted RBP5.26□□□□□ -1.57
UBXN4-206ENST00000470687 ATAD2Q6PL18 1390 aa5.26□□□□□ -1.57
UBXN4-206ENST00000470687 RAD21O60216 631 aa5.25□□□□□ -1.57
UBXN4-206ENST00000470687 IGLV1-40P01703 118 aa5.25□□□□□ -1.57
UBXN4-206ENST00000470687 EPB42P16452 691 aa5.25□□□□□ -1.57
UBXN4-206ENST00000470687 RTN1Q16799 776 aa5.25□□□□□ -1.57
UBXN4-206ENST00000470687 KRT25Q7Z3Z0 450 aa5.25□□□□□ -1.57
UBXN4-206ENST00000470687 OGFOD1Q8N543 542 aa5.25□□□□□ -1.57
UBXN4-206ENST00000470687 RAXQ9Y2V3 346 aa5.25□□□□□ -1.57
UBXN4-206ENST00000470687 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.24□□□□□ -1.57
UBXN4-206ENST00000470687 ADAMTS4O75173 837 aa5.24□□□□□ -1.57
UBXN4-206ENST00000470687 SPINK2P20155 84 aa5.24□□□□□ -1.57
UBXN4-206ENST00000470687 TARSP26639 723 aaKnown RBP5.24□□□□□ -1.57
UBXN4-206ENST00000470687 INPP5BP32019 993 aa5.24□□□□□ -1.57
UBXN4-206ENST00000470687 GAS2L2Q8NHY3 880 aa5.24□□□□□ -1.57
UBXN4-206ENST00000470687 SCG3Q8WXD2 468 aaKnown RBP5.24□□□□□ -1.57
UBXN4-206ENST00000470687 IFT43Q96FT9 208 aa5.24□□□□□ -1.57
UBXN4-206ENST00000470687 ZMIZ1Q9ULJ6 1067 aa5.24□□□□□ -1.57
UBXN4-206ENST00000470687 RARAP10276 462 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 GLB1P16278 677 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 EIF2AK2P19525 551 aaKnown RBP5.23□□□□□ -1.57
UBXN4-206ENST00000470687 IDH3AP50213 366 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 NRLP54845 237 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 FAM69CQ0P6D2 419 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 HFE2Q6ZVN8 426 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 ZDHHC13Q8IUH4 622 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 AGGF1Q8N302 714 aaeCLIP5.23□□□□□ -1.57
UBXN4-206ENST00000470687 CHMP7Q8WUX9 453 aaPredicted RBP5.23□□□□□ -1.57
UBXN4-206ENST00000470687 ZNF594Q96JF6 807 aaPredicted RBP5.23□□□□□ -1.57
UBXN4-206ENST00000470687 CALR3Q96L12 384 aaKnown RBP5.23□□□□□ -1.57
UBXN4-206ENST00000470687 ARXQ96QS3 562 aa5.23□□□□□ -1.57
UBXN4-206ENST00000470687 SRA1Q9HD15 236 aaKnown RBP5.23□□□□□ -1.57
UBXN4-206ENST00000470687 SASH3O75995 380 aa5.22□□□□□ -1.57
UBXN4-206ENST00000470687 SETDB1Q15047 1291 aa5.22□□□□□ -1.57
UBXN4-206ENST00000470687 CRTC2Q53ET0 693 aaPredicted RBP5.22□□□□□ -1.57
UBXN4-206ENST00000470687 CDCA8Q53HL2 280 aa5.22□□□□□ -1.57
UBXN4-206ENST00000470687 ARID3AQ99856 593 aa5.22□□□□□ -1.57
UBXN4-206ENST00000470687 C11orf16Q9NQ32 467 aa5.22□□□□□ -1.57
UBXN4-206ENST00000470687 STOML1Q9UBI4 398 aa5.22□□□□□ -1.57
UBXN4-206ENST00000470687 MKRN1Q9UHC7 482 aaKnown RBP5.22□□□□□ -1.57
UBXN4-206ENST00000470687 ATP9BO43861 1147 aa5.21□□□□□ -1.58
UBXN4-206ENST00000470687 ARID4AP29374 1257 aaPredicted RBP5.21□□□□□ -1.58
UBXN4-206ENST00000470687 ARSDP51689 593 aa5.21□□□□□ -1.58
UBXN4-206ENST00000470687 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.21□□□□□ -1.58
UBXN4-206ENST00000470687 MAP4K3Q8IVH8 894 aa5.21□□□□□ -1.58
UBXN4-206ENST00000470687 PLD4Q96BZ4 506 aa5.21□□□□□ -1.58
UBXN4-206ENST00000470687 UBL7Q96S82 380 aaPredicted RBP5.21□□□□□ -1.58
UBXN4-206ENST00000470687 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
UBXN4-206ENST00000470687 TMEM88BA6NKF7 163 aa5.2□□□□□ -1.58
UBXN4-206ENST00000470687 DHX15O43143 795 aaKnown RBP5.2□□□□□ -1.58
UBXN4-206ENST00000470687 RFX1P22670 979 aa5.2□□□□□ -1.58
UBXN4-206ENST00000470687 GRIK1P39086 918 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms