RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 PRAG1Q86YV5 1406 aa7.06□□□□□ -1.28
RNF220-207ENST00000470498 ABCC11Q96J66 1382 aa7.06□□□□□ -1.28
RNF220-207ENST00000470498 CLTCL1P53675 1640 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 UPP2O95045 317 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 BMP1P13497 986 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 RELBQ01201 579 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 PSME1Q06323 249 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 MRPL14Q6P1L8 145 aaKnown RBP7.05□□□□□ -1.28
RNF220-207ENST00000470498 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 KDF1Q8NAX2 398 aaPredicted RBP7.05□□□□□ -1.28
RNF220-207ENST00000470498 PBXIP1Q96AQ6 731 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 C14orf93Q9H972 538 aaKnown RBP7.05□□□□□ -1.28
RNF220-207ENST00000470498 PCDHGA11Q9Y5H2 935 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 ANKRD30BQ9BXX2 1392 aa7.05□□□□□ -1.28
RNF220-207ENST00000470498 NPHP3Q7Z494 1330 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 PTCH1Q13635 1447 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 GNRH1P01148 92 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 RASA1P20936 1047 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 PTGIRP43119 386 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 SRPK2P78362 688 aaKnown RBP7.04□□□□□ -1.28
RNF220-207ENST00000470498 CLDN10P78369 228 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 CDCA8Q53HL2 280 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 TMEM132EQ6IEE7 984 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 NPAS3Q8IXF0 933 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 ARHGEF10LQ9HCE6 1279 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 DNAAF2Q9NVR5 837 aaKnown RBP7.04□□□□□ -1.28
RNF220-207ENST00000470498 STK26Q9P289 416 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 NHSL1Q5SYE7 1610 aa7.04□□□□□ -1.28
RNF220-207ENST00000470498 LAMC1P11047 1609 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 FAM196BA6NMK8 535 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L15C9J2P7 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L10C9JJH3 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L13C9JLJ4 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L12C9JPN9 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L11C9JVI0 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L21D6R901 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L18D6R9N7 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L22D6RA61 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L17D6RBQ6 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L19D6RCP7 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L20D6RJB6 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 BMP2P12643 396 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 USP17L24Q0WX57 530 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 CRTC2Q53ET0 693 aaPredicted RBP7.03□□□□□ -1.28
RNF220-207ENST00000470498 LARP1Q6PKG0 1096 aaKnown RBP7.03□□□□□ -1.28
RNF220-207ENST00000470498 KRT28Q7Z3Y7 464 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 TRIM46Q7Z4K8 759 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 ZNF594Q96JF6 807 aaPredicted RBP7.03□□□□□ -1.28
RNF220-207ENST00000470498 ZNF395Q9H8N7 513 aaPredicted RBP7.03□□□□□ -1.28
RNF220-207ENST00000470498 KIAA1024Q9UPX6 916 aa7.03□□□□□ -1.28
RNF220-207ENST00000470498 LRPPRCP42704 1394 aaKnown RBP7.03□□□□□ -1.28
RNF220-207ENST00000470498 SPATA31E1Q6ZUB1 1445 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 ZBTB7BO15156 539 aaPredicted RBP7.02□□□□□ -1.29
RNF220-207ENST00000470498 KCNMA1Q12791 1236 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 PTK7Q13308 1070 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 SCARF1Q14162 830 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 C6orf118Q5T5N4 469 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 LARGE2Q8N3Y3 721 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 TPCN2Q8NHX9 752 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 PURBQ96QR8 312 aaKnown RBP7.02□□□□□ -1.29
RNF220-207ENST00000470498 RAB6BQ9NRW1 208 aa7.02□□□□□ -1.29
RNF220-207ENST00000470498 SPATA31A3Q5VYP0 1347 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 SPINT1O43278 529 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 STAU1O95793 577 aaKnown RBP7.01□□□□□ -1.29
RNF220-207ENST00000470498 SCNN1DP51172 638 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 GDF10P55107 478 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 CCDC102BQ68D86 513 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 SIX5Q8N196 739 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 ETNK1Q9HBU6 452 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 CCDC144AA2RUR9 1427 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 TECPR2O15040 1411 aa7.01□□□□□ -1.29
RNF220-207ENST00000470498 BCL9LQ86UU0 1499 aa7□□□□□ -1.29
RNF220-207ENST00000470498 DHX57Q6P158 1386 aaKnown RBP7□□□□□ -1.29
RNF220-207ENST00000470498 TMEM229AB2RXF0 380 aa7□□□□□ -1.29
RNF220-207ENST00000470498 MEN1O00255 615 aa7□□□□□ -1.29
RNF220-207ENST00000470498 WASLO00401 505 aaPredicted RBP7□□□□□ -1.29
RNF220-207ENST00000470498 ATG7O95352 703 aa7□□□□□ -1.29
RNF220-207ENST00000470498 IL2RAP01589 272 aa7□□□□□ -1.29
RNF220-207ENST00000470498 XPCQ01831 940 aaPredicted RBP7□□□□□ -1.29
RNF220-207ENST00000470498 CLN3Q13286 438 aa7□□□□□ -1.29
RNF220-207ENST00000470498 UNC5CLQ8IV45 518 aa7□□□□□ -1.29
RNF220-207ENST00000470498 ZFP42Q96MM3 310 aa7□□□□□ -1.29
RNF220-207ENST00000470498 INSM2Q96T92 566 aaPredicted RBP7□□□□□ -1.29
RNF220-207ENST00000470498 RBM19Q9Y4C8 960 aaKnown RBP7□□□□□ -1.29
RNF220-207ENST00000470498 SETD1AO15047 1707 aaKnown RBP7□□□□□ -1.29
RNF220-207ENST00000470498 NALCNQ8IZF0 1738 aa7□□□□□ -1.29
RNF220-207ENST00000470498 PPLO60437 1756 aa7□□□□□ -1.29
RNF220-207ENST00000470498 DKK1O94907 266 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 INHAP05111 366 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 ANKMY2Q8IV38 441 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 CNKSR1Q969H4 720 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 XAGE2Q96GT9 111 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 NLRP3Q96P20 1036 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 ESYT1Q9BSJ8 1104 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 POLMQ9NP87 494 aaPredicted RBP6.99□□□□□ -1.29
RNF220-207ENST00000470498 NOVA2Q9UNW9 492 aaKnown RBP6.99□□□□□ -1.29
RNF220-207ENST00000470498 ATRNO75882 1429 aa6.99□□□□□ -1.29
RNF220-207ENST00000470498 ATAD2Q6PL18 1390 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms