RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
COL4A5-203ENST00000470339 APBB1O00213 710 aa18.67■□□□□ 0.58
COL4A5-203ENST00000470339 SMARCA5O60264 1052 aaPredicted RBP18.67■□□□□ 0.58
COL4A5-203ENST00000470339 CIAO1O76071 339 aa18.67■□□□□ 0.58
COL4A5-203ENST00000470339 NFIXQ14938 502 aa18.67■□□□□ 0.58
COL4A5-203ENST00000470339 BICDL1Q6ZP65 573 aa18.67■□□□□ 0.58
COL4A5-203ENST00000470339 NBPF5PQ86XG9 351 aaPredicted RBP18.67■□□□□ 0.58
COL4A5-203ENST00000470339 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
COL4A5-203ENST00000470339 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
COL4A5-203ENST00000470339 STK32BQ9NY57 414 aa18.67■□□□□ 0.58
COL4A5-203ENST00000470339 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
COL4A5-203ENST00000470339 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
COL4A5-203ENST00000470339 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
COL4A5-203ENST00000470339 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
COL4A5-203ENST00000470339 ERFEQ4G0M1 354 aa18.66■□□□□ 0.58
COL4A5-203ENST00000470339 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
COL4A5-203ENST00000470339 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
COL4A5-203ENST00000470339 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
COL4A5-203ENST00000470339 SASH1O94885 1247 aa18.65■□□□□ 0.58
COL4A5-203ENST00000470339 IL15P40933 162 aaPredicted RBP18.65■□□□□ 0.58
COL4A5-203ENST00000470339 SF3B3Q15393 1217 aaKnown RBP18.65■□□□□ 0.58
COL4A5-203ENST00000470339 FAM161AQ3B820 660 aa18.65■□□□□ 0.58
COL4A5-203ENST00000470339 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
COL4A5-203ENST00000470339 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
COL4A5-203ENST00000470339 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
COL4A5-203ENST00000470339 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
COL4A5-203ENST00000470339 RIC1Q4ADV7 1423 aa18.65■□□□□ 0.58
COL4A5-203ENST00000470339 EYA2O00167 538 aa18.64■□□□□ 0.57
COL4A5-203ENST00000470339 ITGA6P23229 1130 aa18.64■□□□□ 0.57
COL4A5-203ENST00000470339 C16orf71Q8IYS4 520 aaPredicted RBP18.64■□□□□ 0.57
COL4A5-203ENST00000470339 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
COL4A5-203ENST00000470339 GREM2Q9H772 168 aa18.64■□□□□ 0.57
COL4A5-203ENST00000470339 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
COL4A5-203ENST00000470339 SALL3Q9BXA9 1300 aa18.64■□□□□ 0.57
COL4A5-203ENST00000470339 ATG9AQ7Z3C6 839 aa18.63■□□□□ 0.57
COL4A5-203ENST00000470339 DEFB132Q7Z7B7 95 aa18.63■□□□□ 0.57
COL4A5-203ENST00000470339 SIL1Q9H173 461 aa18.63■□□□□ 0.57
COL4A5-203ENST00000470339 AOX1Q06278 1338 aa18.63■□□□□ 0.57
COL4A5-203ENST00000470339 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
COL4A5-203ENST00000470339 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
COL4A5-203ENST00000470339 NLRP3Q96P20 1036 aa18.62■□□□□ 0.57
COL4A5-203ENST00000470339 IL1RAPL2Q9NP60 686 aa18.62■□□□□ 0.57
COL4A5-203ENST00000470339 GPR108Q9NPR9 543 aa18.62■□□□□ 0.57
COL4A5-203ENST00000470339 NRXN2Q9P2S2 1712 aa18.62■□□□□ 0.57
COL4A5-203ENST00000470339 PDE1AP54750 535 aa18.61■□□□□ 0.57
COL4A5-203ENST00000470339 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
COL4A5-203ENST00000470339 ANO8Q9HCE9 1232 aaPredicted RBP18.61■□□□□ 0.57
COL4A5-203ENST00000470339 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
COL4A5-203ENST00000470339 MSH5O43196 834 aa18.6■□□□□ 0.57
COL4A5-203ENST00000470339 SERPINB2P05120 415 aa18.6■□□□□ 0.57
COL4A5-203ENST00000470339 MX1P20591 662 aa18.6■□□□□ 0.57
COL4A5-203ENST00000470339 ZNF594Q96JF6 807 aaPredicted RBP18.6■□□□□ 0.57
COL4A5-203ENST00000470339 LRP5O75197 1615 aa18.6■□□□□ 0.57
COL4A5-203ENST00000470339 POLRMTO00411 1230 aaKnown RBP18.59■□□□□ 0.57
COL4A5-203ENST00000470339 TFCP2Q12800 502 aa18.59■□□□□ 0.57
COL4A5-203ENST00000470339 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
COL4A5-203ENST00000470339 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
COL4A5-203ENST00000470339 CCDC85AQ96PX6 553 aaPredicted RBP18.59■□□□□ 0.57
COL4A5-203ENST00000470339 CDC5LQ99459 802 aaKnown RBP18.59■□□□□ 0.57
COL4A5-203ENST00000470339 RIPOR2Q9Y4F9 1068 aa18.59■□□□□ 0.57
COL4A5-203ENST00000470339 TTC41PQ6P2S7 1318 aa18.58■□□□□ 0.57
COL4A5-203ENST00000470339 NPHP1O15259 732 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.56
COL4A5-203ENST00000470339 ST5P78524 1137 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 DDR1Q08345 913 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 LRRC24Q50LG9 513 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 TTC22Q5TAA0 569 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 PRR5LQ6MZQ0 368 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 GPATCH3Q96I76 525 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 CEP126Q9P2H0 1117 aa18.58■□□□□ 0.56
COL4A5-203ENST00000470339 TNNI3KQ59H18 835 aa18.57■□□□□ 0.56
COL4A5-203ENST00000470339 AACSQ86V21 672 aa18.57■□□□□ 0.56
COL4A5-203ENST00000470339 EAF2Q96CJ1 260 aaPredicted RBP18.57■□□□□ 0.56
COL4A5-203ENST00000470339 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
COL4A5-203ENST00000470339 PUS3Q9BZE2 481 aaKnown RBP18.57■□□□□ 0.56
COL4A5-203ENST00000470339 AKAP2Q9Y2D5 859 aa18.57■□□□□ 0.56
COL4A5-203ENST00000470339 FPGT-TNNI3KV9GXZ4 949 aa18.57■□□□□ 0.56
COL4A5-203ENST00000470339 SPEF2Q9C093 1822 aa18.57■□□□□ 0.56
COL4A5-203ENST00000470339 MROH5Q6ZUA9 1318 aa18.56■□□□□ 0.56
COL4A5-203ENST00000470339 IGHMBP2P38935 993 aaKnown RBP18.56■□□□□ 0.56
COL4A5-203ENST00000470339 CNNM1Q9NRU3 951 aa18.56■□□□□ 0.56
COL4A5-203ENST00000470339 TNRC6CQ9HCJ0 1690 aaKnown RBP18.55■□□□□ 0.56
COL4A5-203ENST00000470339 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
COL4A5-203ENST00000470339 SLC16A10Q8TF71 515 aa18.55■□□□□ 0.56
COL4A5-203ENST00000470339 MPHOSPH8Q99549 860 aa18.55■□□□□ 0.56
COL4A5-203ENST00000470339 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
COL4A5-203ENST00000470339 TAF1P21675 1872 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 KLRG2A4D1S0 409 aaPredicted RBP18.54■□□□□ 0.56
COL4A5-203ENST00000470339 ERC2O15083 957 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 ANKRD18AQ8IVF6 992 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 PARP3Q9Y6F1 533 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.54■□□□□ 0.56
COL4A5-203ENST00000470339 AK9Q5TCS8 1911 aa18.54■□□□□ 0.56
COL4A5-203ENST00000470339 GLRX3O76003 335 aaKnown RBP18.53■□□□□ 0.56
COL4A5-203ENST00000470339 MMP10P09238 476 aa18.53■□□□□ 0.56
COL4A5-203ENST00000470339 GSPT1P15170 499 aaKnown RBP18.53■□□□□ 0.56
COL4A5-203ENST00000470339 CRY2Q49AN0 593 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms