RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
BRCA1-209ENST00000470026 AFDNP55196 1824 aaKnown RBP16.25■□□□□ 0.19
BRCA1-209ENST00000470026 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
BRCA1-209ENST00000470026 ANKRD13DQ6ZTN6 518 aa16.25■□□□□ 0.19
BRCA1-209ENST00000470026 NFATC2IPQ8NCF5 419 aa16.25■□□□□ 0.19
BRCA1-209ENST00000470026 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
BRCA1-209ENST00000470026 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
BRCA1-209ENST00000470026 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
BRCA1-209ENST00000470026 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
BRCA1-209ENST00000470026 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
BRCA1-209ENST00000470026 MYL6BP14649 208 aa16.24■□□□□ 0.19
BRCA1-209ENST00000470026 TATP17735 454 aaPredicted RBP16.24■□□□□ 0.19
BRCA1-209ENST00000470026 CASP7P55210 303 aa16.24■□□□□ 0.19
BRCA1-209ENST00000470026 KRT32Q14532 448 aa16.24■□□□□ 0.19
BRCA1-209ENST00000470026 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
BRCA1-209ENST00000470026 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
BRCA1-209ENST00000470026 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
BRCA1-209ENST00000470026 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
BRCA1-209ENST00000470026 PARP4Q9UKK3 1724 aaKnown RBP16.23■□□□□ 0.19
BRCA1-209ENST00000470026 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
BRCA1-209ENST00000470026 DTNBO60941 627 aa16.22■□□□□ 0.19
BRCA1-209ENST00000470026 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
BRCA1-209ENST00000470026 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
BRCA1-209ENST00000470026 ZNF609O15014 1411 aa16.22■□□□□ 0.19
BRCA1-209ENST00000470026 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
BRCA1-209ENST00000470026 RBM43Q6ZSC3 357 aaKnown RBP16.22■□□□□ 0.19
BRCA1-209ENST00000470026 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
BRCA1-209ENST00000470026 HAUS7Q99871 368 aa16.22■□□□□ 0.19
BRCA1-209ENST00000470026 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
BRCA1-209ENST00000470026 C19orf44Q9H6X5 657 aa16.22■□□□□ 0.19
BRCA1-209ENST00000470026 SPTLC3Q9NUV7 552 aa16.22■□□□□ 0.19
BRCA1-209ENST00000470026 UQCRHLA0A096LP55 91 aa16.21■□□□□ 0.19
BRCA1-209ENST00000470026 DYNC1I1O14576 645 aa16.21■□□□□ 0.19
BRCA1-209ENST00000470026 AP5Z1O43299 807 aa16.21■□□□□ 0.19
BRCA1-209ENST00000470026 UQCRHP07919 91 aa16.21■□□□□ 0.19
BRCA1-209ENST00000470026 CCDC192P0DO97 292 aa16.21■□□□□ 0.19
BRCA1-209ENST00000470026 TFCP2Q12800 502 aa16.21■□□□□ 0.19
BRCA1-209ENST00000470026 NLRP2Q9NX02 1062 aa16.21■□□□□ 0.19
BRCA1-209ENST00000470026 GTF3C6Q969F1 213 aa16.21■□□□□ 0.18
BRCA1-209ENST00000470026 TCEANC2Q96MN5 208 aa16.21■□□□□ 0.18
BRCA1-209ENST00000470026 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.18
BRCA1-209ENST00000470026 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.18
BRCA1-209ENST00000470026 CYP27B1O15528 508 aa16.2■□□□□ 0.18
BRCA1-209ENST00000470026 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 LIG1P18858 919 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 NOLC1Q14978 699 aaKnown RBP eCLIP16.19■□□□□ 0.18
BRCA1-209ENST00000470026 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-209ENST00000470026 PLBD2Q8NHP8 589 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 MAP3K11Q16584 847 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 FAM200AQ8TCP9 573 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 NUP62CLQ9H1M0 184 aa16.19■□□□□ 0.18
BRCA1-209ENST00000470026 TPM3P06753 285 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 FAM173BQ6P4H8 233 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 UBE3BQ7Z3V4 1068 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 TTC5Q8N0Z6 440 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-209ENST00000470026 TTC12Q9H892 705 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-209ENST00000470026 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 H7C1W4 665 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 CYP21A2P08686 494 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 RESTQ13127 1097 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 SMARCC2Q8TAQ2 1214 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-209ENST00000470026 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
BRCA1-209ENST00000470026 DCCP43146 1447 aa16.18■□□□□ 0.18
BRCA1-209ENST00000470026 NUP188Q5SRE5 1749 aa16.17■□□□□ 0.18
BRCA1-209ENST00000470026 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
BRCA1-209ENST00000470026 KBTBD3Q8NAB2 608 aa16.17■□□□□ 0.18
BRCA1-209ENST00000470026 PRIMPOLQ96LW4 560 aa16.17■□□□□ 0.18
BRCA1-209ENST00000470026 TJP1Q07157 1748 aa16.17■□□□□ 0.18
BRCA1-209ENST00000470026 A0A087WZG4 1122 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 FOXO4P98177 505 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 TYRO3Q06418 890 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 MYRIPQ8NFW9 859 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 JARID2Q92833 1246 aaPredicted RBP16.16■□□□□ 0.18
BRCA1-209ENST00000470026 LLPHQ9BRT6 129 aaKnown RBP16.16■□□□□ 0.18
BRCA1-209ENST00000470026 AGXT2Q9BYV1 514 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 CLSTN2Q9H4D0 955 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 UBR2Q8IWV8 1755 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 SPEF2Q9C093 1822 aa16.16■□□□□ 0.18
BRCA1-209ENST00000470026 JAK2O60674 1132 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 Q6ZUG5 572 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 ATG9AQ7Z3C6 839 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 KIAA1524Q8TCG1 905 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 PGBD1Q96JS3 809 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 DACT1Q9NYF0 836 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 CPDO75976 1380 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 PFKFB2O60825 505 aa16.15■□□□□ 0.18
BRCA1-209ENST00000470026 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms