RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 ZNF496Q96IT1 587 aaPredicted RBP15.34■□□□□ 0.05
COMMD2-202ENST00000469896 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
COMMD2-202ENST00000469896 H7C1D1 291 aa15.33■□□□□ 0.04
COMMD2-202ENST00000469896 A1BGP04217 495 aa15.33■□□□□ 0.04
COMMD2-202ENST00000469896 HIRAP54198 1017 aaPredicted RBP15.33■□□□□ 0.04
COMMD2-202ENST00000469896 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
COMMD2-202ENST00000469896 TNIP1Q15025 636 aa15.33■□□□□ 0.04
COMMD2-202ENST00000469896 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.04
COMMD2-202ENST00000469896 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
COMMD2-202ENST00000469896 AKAP11Q9UKA4 1901 aa15.33■□□□□ 0.04
COMMD2-202ENST00000469896 FAM177BA6PVY3 158 aa15.32■□□□□ 0.04
COMMD2-202ENST00000469896 RGL2O15211 777 aa15.32■□□□□ 0.04
COMMD2-202ENST00000469896 AOC3Q16853 763 aa15.32■□□□□ 0.04
COMMD2-202ENST00000469896 CRY2Q49AN0 593 aa15.32■□□□□ 0.04
COMMD2-202ENST00000469896 TRPM4Q8TD43 1214 aa15.32■□□□□ 0.04
COMMD2-202ENST00000469896 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
COMMD2-202ENST00000469896 COLQQ9Y215 455 aaPredicted RBP15.32■□□□□ 0.04
COMMD2-202ENST00000469896 TRIOBPQ9H2D6 2365 aa15.32■□□□□ 0.04
COMMD2-202ENST00000469896 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
COMMD2-202ENST00000469896 SUPT20HQ8NEM7 779 aa15.31■□□□□ 0.04
COMMD2-202ENST00000469896 FMNL2Q96PY5 1086 aa15.31■□□□□ 0.04
COMMD2-202ENST00000469896 UBR2Q8IWV8 1755 aa15.31■□□□□ 0.04
COMMD2-202ENST00000469896 SZT2Q5T011 3432 aa15.3■□□□□ 0.04
COMMD2-202ENST00000469896 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
COMMD2-202ENST00000469896 NOM1Q5C9Z4 860 aaKnown RBP15.3■□□□□ 0.04
COMMD2-202ENST00000469896 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
COMMD2-202ENST00000469896 CNOT7Q9UIV1 285 aaKnown RBP15.3■□□□□ 0.04
COMMD2-202ENST00000469896 HOXA10P31260 410 aaPredicted RBP15.29■□□□□ 0.04
COMMD2-202ENST00000469896 TEFQ10587 303 aa15.29■□□□□ 0.04
COMMD2-202ENST00000469896 DCPSQ96C86 337 aaKnown RBP15.29■□□□□ 0.04
COMMD2-202ENST00000469896 NYXQ9GZU5 481 aa15.29■□□□□ 0.04
COMMD2-202ENST00000469896 METRNQ9UJH8 293 aa15.29■□□□□ 0.04
COMMD2-202ENST00000469896 KIF7Q2M1P5 1343 aa15.28■□□□□ 0.04
COMMD2-202ENST00000469896 TBC1D8O95759 1140 aa15.28■□□□□ 0.04
COMMD2-202ENST00000469896 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
COMMD2-202ENST00000469896 RBM17Q96I25 401 aaKnown RBP15.28■□□□□ 0.04
COMMD2-202ENST00000469896 GPR25O00155 361 aa15.27■□□□□ 0.04
COMMD2-202ENST00000469896 TCERG1O14776 1098 aaKnown RBP15.27■□□□□ 0.04
COMMD2-202ENST00000469896 RAD17O75943 681 aa15.27■□□□□ 0.04
COMMD2-202ENST00000469896 TIE1P35590 1138 aa15.27■□□□□ 0.04
COMMD2-202ENST00000469896 DLK2Q6UY11 383 aa15.27■□□□□ 0.04
COMMD2-202ENST00000469896 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
COMMD2-202ENST00000469896 CEP290O15078 2479 aa15.27■□□□□ 0.03
COMMD2-202ENST00000469896 C7P10643 843 aa15.26■□□□□ 0.03
COMMD2-202ENST00000469896 RASAL3Q86YV0 1011 aa15.26■□□□□ 0.03
COMMD2-202ENST00000469896 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
COMMD2-202ENST00000469896 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
COMMD2-202ENST00000469896 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
COMMD2-202ENST00000469896 ADM5C9JUS6 153 aa15.25■□□□□ 0.03
COMMD2-202ENST00000469896 FKTNO75072 461 aa15.25■□□□□ 0.03
COMMD2-202ENST00000469896 IL13P35225 146 aa15.25■□□□□ 0.03
COMMD2-202ENST00000469896 SULF1Q8IWU6 871 aa15.25■□□□□ 0.03
COMMD2-202ENST00000469896 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
COMMD2-202ENST00000469896 MTHFSDQ2M296 383 aaKnown RBP15.24■□□□□ 0.03
COMMD2-202ENST00000469896 DPF2Q92785 391 aa15.24■□□□□ 0.03
COMMD2-202ENST00000469896 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
COMMD2-202ENST00000469896 PIP4K2AP48426 406 aaPredicted RBP15.23■□□□□ 0.03
COMMD2-202ENST00000469896 FKBP1BP68106 108 aa15.23■□□□□ 0.03
COMMD2-202ENST00000469896 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
COMMD2-202ENST00000469896 RTFDC1Q9BY42 306 aaPredicted RBP15.23■□□□□ 0.03
COMMD2-202ENST00000469896 ATP6V0A2Q9Y487 856 aa15.23■□□□□ 0.03
COMMD2-202ENST00000469896 RIC1Q4ADV7 1423 aa15.23■□□□□ 0.03
COMMD2-202ENST00000469896 KIAA2012Q0VF49 1180 aa15.22■□□□□ 0.03
COMMD2-202ENST00000469896 TBC1D10BQ4KMP7 808 aaPredicted RBP15.22■□□□□ 0.03
COMMD2-202ENST00000469896 DPP8Q6V1X1 898 aaPredicted RBP15.22■□□□□ 0.03
COMMD2-202ENST00000469896 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
COMMD2-202ENST00000469896 IFNL1Q8IU54 200 aa15.22■□□□□ 0.03
COMMD2-202ENST00000469896 SHTN1A0MZ66 631 aa15.21■□□□□ 0.03
COMMD2-202ENST00000469896 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
COMMD2-202ENST00000469896 HMOX1P09601 288 aa15.21■□□□□ 0.03
COMMD2-202ENST00000469896 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
COMMD2-202ENST00000469896 KIAA0100Q14667 2235 aaKnown RBP15.21■□□□□ 0.03
COMMD2-202ENST00000469896 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
COMMD2-202ENST00000469896 SREBF2Q12772 1141 aa15.2■□□□□ 0.02
COMMD2-202ENST00000469896 TRIM17Q9Y577 477 aa15.2■□□□□ 0.02
COMMD2-202ENST00000469896 HTTP42858 3142 aa15.19■□□□□ 0.02
COMMD2-202ENST00000469896 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
COMMD2-202ENST00000469896 TM4SF4P48230 202 aa15.19■□□□□ 0.02
COMMD2-202ENST00000469896 RBM26Q5T8P6 1007 aaKnown RBP15.19■□□□□ 0.02
COMMD2-202ENST00000469896 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
COMMD2-202ENST00000469896 CDCA5Q96FF9 252 aa15.19■□□□□ 0.02
COMMD2-202ENST00000469896 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
COMMD2-202ENST00000469896 USP16Q9Y5T5 823 aa15.19■□□□□ 0.02
COMMD2-202ENST00000469896 BTBD11A6QL63 1104 aa15.18■□□□□ 0.02
COMMD2-202ENST00000469896 GNAT3A8MTJ3 354 aa15.18■□□□□ 0.02
COMMD2-202ENST00000469896 H0YGN5 161 aa15.18■□□□□ 0.02
COMMD2-202ENST00000469896 EN2P19622 333 aaPredicted RBP15.18■□□□□ 0.02
COMMD2-202ENST00000469896 MPNDQ8N594 471 aa15.18■□□□□ 0.02
COMMD2-202ENST00000469896 CFHR5Q9BXR6 569 aa15.18■□□□□ 0.02
COMMD2-202ENST00000469896 GGA3Q9NZ52 723 aa15.18■□□□□ 0.02
COMMD2-202ENST00000469896 IBTKQ9P2D0 1353 aaPredicted RBP15.18■□□□□ 0.02
COMMD2-202ENST00000469896 RANBP2P49792 3224 aaKnown RBP15.18■□□□□ 0.02
COMMD2-202ENST00000469896 COL6A3P12111 3177 aa15.17■□□□□ 0.02
COMMD2-202ENST00000469896 SNRPA1P09661 255 aaKnown RBP15.17■□□□□ 0.02
COMMD2-202ENST00000469896 HLFQ16534 295 aa15.17■□□□□ 0.02
COMMD2-202ENST00000469896 SLC51AQ86UW1 340 aa15.17■□□□□ 0.02
COMMD2-202ENST00000469896 CENPFP49454 3210 aa15.16■□□□□ 0.02
COMMD2-202ENST00000469896 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
COMMD2-202ENST00000469896 KIF4BQ2VIQ3 1234 aa15.16■□□□□ 0.02
COMMD2-202ENST00000469896 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms