RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
TRAF4-208ENST00000469529 CIAO1O76071 339 aa15.78■□□□□ 0.12
TRAF4-208ENST00000469529 POLD1P28340 1107 aa15.78■□□□□ 0.12
TRAF4-208ENST00000469529 BCORQ6W2J9 1755 aa15.77■□□□□ 0.12
TRAF4-208ENST00000469529 CARMIL3Q8ND23 1372 aa15.77■□□□□ 0.12
TRAF4-208ENST00000469529 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRAF4-208ENST00000469529 NBPF5PQ86XG9 351 aaPredicted RBP15.77■□□□□ 0.12
TRAF4-208ENST00000469529 RHPN1Q8TCX5 695 aa15.77■□□□□ 0.12
TRAF4-208ENST00000469529 SYT17Q9BSW7 474 aa15.77■□□□□ 0.12
TRAF4-208ENST00000469529 EXOC6BQ9Y2D4 811 aa15.77■□□□□ 0.12
TRAF4-208ENST00000469529 UBR3Q6ZT12 1888 aa15.77■□□□□ 0.11
TRAF4-208ENST00000469529 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.11
TRAF4-208ENST00000469529 SCN7AQ01118 1682 aa15.76■□□□□ 0.11
TRAF4-208ENST00000469529 PDE4AP27815 886 aa15.76■□□□□ 0.11
TRAF4-208ENST00000469529 IFIT5Q13325 482 aaKnown RBP15.76■□□□□ 0.11
TRAF4-208ENST00000469529 CCDC57Q2TAC2 916 aa15.76■□□□□ 0.11
TRAF4-208ENST00000469529 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-208ENST00000469529 OSBPL3Q9H4L5 887 aa15.76■□□□□ 0.11
TRAF4-208ENST00000469529 ZBTB47Q9UFB7 747 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-208ENST00000469529 ANKRD36CQ5JPF3 1778 aa15.76■□□□□ 0.11
TRAF4-208ENST00000469529 COL24A1Q17RW2 1714 aa15.75■□□□□ 0.11
TRAF4-208ENST00000469529 KLRG2A4D1S0 409 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-208ENST00000469529 EYA2O00167 538 aa15.75■□□□□ 0.11
TRAF4-208ENST00000469529 IL15P40933 162 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-208ENST00000469529 ERFEQ4G0M1 354 aa15.75■□□□□ 0.11
TRAF4-208ENST00000469529 CCDC152Q4G0S7 254 aa15.75■□□□□ 0.11
TRAF4-208ENST00000469529 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
TRAF4-208ENST00000469529 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
TRAF4-208ENST00000469529 POLRMTO00411 1230 aaKnown RBP15.74■□□□□ 0.11
TRAF4-208ENST00000469529 SASH1O94885 1247 aa15.74■□□□□ 0.11
TRAF4-208ENST00000469529 SERPINB2P05120 415 aa15.74■□□□□ 0.11
TRAF4-208ENST00000469529 HCLS1P14317 486 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-208ENST00000469529 BICDL1Q6ZP65 573 aa15.74■□□□□ 0.11
TRAF4-208ENST00000469529 NLRP3Q96P20 1036 aa15.74■□□□□ 0.11
TRAF4-208ENST00000469529 LNPKQ9C0E8 428 aa15.74■□□□□ 0.11
TRAF4-208ENST00000469529 STAP2Q9UGK3 403 aa15.74■□□□□ 0.11
TRAF4-208ENST00000469529 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
TRAF4-208ENST00000469529 SALL3Q9BXA9 1300 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 ITGA6P23229 1130 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 GTF2E1P29083 439 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-208ENST00000469529 MSL1Q68DK7 614 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 ATG9AQ7Z3C6 839 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 NUTM1Q86Y26 1132 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 GREM2Q9H772 168 aa15.73■□□□□ 0.11
TRAF4-208ENST00000469529 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
TRAF4-208ENST00000469529 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
TRAF4-208ENST00000469529 PRR5LQ6MZQ0 368 aa15.72■□□□□ 0.11
TRAF4-208ENST00000469529 CLASRPQ8N2M8 674 aaKnown RBP15.72■□□□□ 0.11
TRAF4-208ENST00000469529 RIPOR2Q9Y4F9 1068 aa15.72■□□□□ 0.11
TRAF4-208ENST00000469529 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
TRAF4-208ENST00000469529 DDR1Q08345 913 aa15.71■□□□□ 0.11
TRAF4-208ENST00000469529 CNBD1Q8NA66 436 aa15.71■□□□□ 0.11
TRAF4-208ENST00000469529 C4AP0C0L4 1744 aa15.71■□□□□ 0.1
TRAF4-208ENST00000469529 AOX1Q06278 1338 aa15.7■□□□□ 0.1
TRAF4-208ENST00000469529 OS9Q13438 667 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-208ENST00000469529 CRY2Q49AN0 593 aa15.7■□□□□ 0.1
TRAF4-208ENST00000469529 KLHDC4Q8TBB5 520 aa15.7■□□□□ 0.1
TRAF4-208ENST00000469529 CDC5LQ99459 802 aaKnown RBP15.7■□□□□ 0.1
TRAF4-208ENST00000469529 CHMP3Q9Y3E7 222 aa15.7■□□□□ 0.1
TRAF4-208ENST00000469529 SMARCA5O60264 1052 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-208ENST00000469529 HOXA10P31260 410 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-208ENST00000469529 RGS3P49796 1198 aa15.69■□□□□ 0.1
TRAF4-208ENST00000469529 ST5P78524 1137 aa15.69■□□□□ 0.1
TRAF4-208ENST00000469529 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
TRAF4-208ENST00000469529 LDHAL6AQ6ZMR3 332 aa15.69■□□□□ 0.1
TRAF4-208ENST00000469529 C16orf71Q8IYS4 520 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-208ENST00000469529 BRIP1Q9BX63 1249 aa15.69■□□□□ 0.1
TRAF4-208ENST00000469529 CEP126Q9P2H0 1117 aa15.69■□□□□ 0.1
TRAF4-208ENST00000469529 ABCC12Q96J65 1359 aa15.68■□□□□ 0.1
TRAF4-208ENST00000469529 PDE1AP54750 535 aa15.68■□□□□ 0.1
TRAF4-208ENST00000469529 SKAP1Q86WV1 359 aa15.68■□□□□ 0.1
TRAF4-208ENST00000469529 EAF2Q96CJ1 260 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-208ENST00000469529 ZNF594Q96JF6 807 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-208ENST00000469529 BSDC1Q9NW68 430 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-208ENST00000469529 AKAP2Q9Y2D5 859 aa15.68■□□□□ 0.1
TRAF4-208ENST00000469529 TTC41PQ6P2S7 1318 aa15.68■□□□□ 0.1
TRAF4-208ENST00000469529 MROH5Q6ZUA9 1318 aa15.68■□□□□ 0.1
TRAF4-208ENST00000469529 MMP10P09238 476 aa15.67■□□□□ 0.1
TRAF4-208ENST00000469529 LRRC24Q50LG9 513 aa15.67■□□□□ 0.1
TRAF4-208ENST00000469529 TAF7LQ5H9L4 462 aa15.67■□□□□ 0.1
TRAF4-208ENST00000469529 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
TRAF4-208ENST00000469529 SIL1Q9H173 461 aa15.67■□□□□ 0.1
TRAF4-208ENST00000469529 PARP3Q9Y6F1 533 aa15.67■□□□□ 0.1
TRAF4-208ENST00000469529 APBB1O00213 710 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 MX1P20591 662 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 YY1P25490 414 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 IGHMBP2P38935 993 aaKnown RBP15.66■□□□□ 0.1
TRAF4-208ENST00000469529 RPS8P62241 208 aaKnown RBP15.66■□□□□ 0.1
TRAF4-208ENST00000469529 TFCP2Q12800 502 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 TNNI3KQ59H18 835 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 PUS3Q9BZE2 481 aaKnown RBP15.66■□□□□ 0.1
TRAF4-208ENST00000469529 IL1RAPL2Q9NP60 686 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 FPGT-TNNI3KV9GXZ4 949 aa15.66■□□□□ 0.1
TRAF4-208ENST00000469529 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
TRAF4-208ENST00000469529 DDX46Q7L014 1031 aaKnown RBP15.65■□□□□ 0.1
TRAF4-208ENST00000469529 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms