RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 MYH16Q9H6N6 1097 aa23.45■■□□□ 1.34
PHGDH-204ENST00000469443 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
PHGDH-204ENST00000469443 CEP350Q5VT06 3117 aa23.45■■□□□ 1.34
PHGDH-204ENST00000469443 COL4A5P29400 1685 aa23.44■■□□□ 1.34
PHGDH-204ENST00000469443 PCCAP05165 728 aaPredicted RBP23.44■■□□□ 1.34
PHGDH-204ENST00000469443 HSP90B1P14625 803 aaKnown RBP23.44■■□□□ 1.34
PHGDH-204ENST00000469443 JDP2Q8WYK2 163 aa23.44■■□□□ 1.34
PHGDH-204ENST00000469443 ZNF541Q9H0D2 1346 aa23.43■■□□□ 1.34
PHGDH-204ENST00000469443 FZD9O00144 591 aa23.43■■□□□ 1.34
PHGDH-204ENST00000469443 TMC4Q7Z404 712 aa23.43■■□□□ 1.34
PHGDH-204ENST00000469443 ZNF521Q96K83 1311 aa23.42■■□□□ 1.34
PHGDH-204ENST00000469443 NEXNQ0ZGT2 675 aa23.42■■□□□ 1.34
PHGDH-204ENST00000469443 FLIIQ13045 1269 aa23.42■■□□□ 1.34
PHGDH-204ENST00000469443 COL4A1P02462 1669 aa23.41■■□□□ 1.34
PHGDH-204ENST00000469443 LARGE2Q8N3Y3 721 aa23.41■■□□□ 1.34
PHGDH-204ENST00000469443 SMC1BQ8NDV3 1235 aa23.41■■□□□ 1.34
PHGDH-204ENST00000469443 SUPT20HQ8NEM7 779 aa23.41■■□□□ 1.34
PHGDH-204ENST00000469443 L3MBTL3Q96JM7 780 aaPredicted RBP23.41■■□□□ 1.34
PHGDH-204ENST00000469443 IGKV5-2P06315 115 aa23.4■■□□□ 1.34
PHGDH-204ENST00000469443 DPP8Q6V1X1 898 aaPredicted RBP23.4■■□□□ 1.34
PHGDH-204ENST00000469443 MPNDQ8N594 471 aa23.4■■□□□ 1.34
PHGDH-204ENST00000469443 RTFDC1Q9BY42 306 aaPredicted RBP23.4■■□□□ 1.34
PHGDH-204ENST00000469443 VPS33BQ9H267 617 aa23.4■■□□□ 1.34
PHGDH-204ENST00000469443 PDE8AO60658 829 aa23.39■■□□□ 1.33
PHGDH-204ENST00000469443 APLP1P51693 650 aa23.39■■□□□ 1.33
PHGDH-204ENST00000469443 CELF1Q92879 486 aaKnown RBP23.39■■□□□ 1.33
PHGDH-204ENST00000469443 DUOX1Q9NRD9 1551 aa23.39■■□□□ 1.33
PHGDH-204ENST00000469443 CDHR2Q9BYE9 1310 aa23.38■■□□□ 1.33
PHGDH-204ENST00000469443 IQCA1LA6NCM1 817 aa23.38■■□□□ 1.33
PHGDH-204ENST00000469443 CCER2I3L3R5 266 aa23.38■■□□□ 1.33
PHGDH-204ENST00000469443 PPIP5K2O43314 1243 aa23.38■■□□□ 1.33
PHGDH-204ENST00000469443 EIF6P56537 245 aaKnown RBP23.38■■□□□ 1.33
PHGDH-204ENST00000469443 FKBP5Q13451 457 aaPredicted RBP23.38■■□□□ 1.33
PHGDH-204ENST00000469443 JARID2Q92833 1246 aaPredicted RBP23.38■■□□□ 1.33
PHGDH-204ENST00000469443 LTBP1Q14766 1721 aa23.37■■□□□ 1.33
PHGDH-204ENST00000469443 NEURL1BA8MQ27 555 aa23.37■■□□□ 1.33
PHGDH-204ENST00000469443 NIM1KQ8IY84 436 aa23.37■■□□□ 1.33
PHGDH-204ENST00000469443 GPC2Q8N158 579 aa23.37■■□□□ 1.33
PHGDH-204ENST00000469443 SPEF2Q9C093 1822 aa23.36■■□□□ 1.33
PHGDH-204ENST00000469443 AOC3Q16853 763 aa23.36■■□□□ 1.33
PHGDH-204ENST00000469443 CWF19L2Q2TBE0 894 aaKnown RBP23.36■■□□□ 1.33
PHGDH-204ENST00000469443 CCDC152Q4G0S7 254 aa23.36■■□□□ 1.33
PHGDH-204ENST00000469443 RPS8P62241 208 aaKnown RBP23.35■■□□□ 1.33
PHGDH-204ENST00000469443 DNAAF4Q8WXU2 420 aa23.35■■□□□ 1.33
PHGDH-204ENST00000469443 TAF1DQ9H5J8 278 aaPredicted RBP23.34■■□□□ 1.33
PHGDH-204ENST00000469443 SEC31BQ9NQW1 1179 aa23.34■■□□□ 1.33
PHGDH-204ENST00000469443 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
PHGDH-204ENST00000469443 HACL1Q9UJ83 578 aa23.33■■□□□ 1.33
PHGDH-204ENST00000469443 GJA3Q9Y6H8 435 aa23.33■■□□□ 1.33
PHGDH-204ENST00000469443 H7C1W4 665 aa23.32■■□□□ 1.32
PHGDH-204ENST00000469443 NSFL1CQ9UNZ2 370 aaKnown RBP23.32■■□□□ 1.32
PHGDH-204ENST00000469443 ADAMTSL1Q8N6G6 1762 aa23.32■■□□□ 1.32
PHGDH-204ENST00000469443 POTEIP0CG38 1075 aa23.31■■□□□ 1.32
PHGDH-204ENST00000469443 POTEJP0CG39 1038 aa23.31■■□□□ 1.32
PHGDH-204ENST00000469443 GCKRQ14397 625 aa23.31■■□□□ 1.32
PHGDH-204ENST00000469443 CHADLQ6NUI6 762 aa23.31■■□□□ 1.32
PHGDH-204ENST00000469443 LINS1Q8NG48 757 aa23.31■■□□□ 1.32
PHGDH-204ENST00000469443 CCDC85AQ96PX6 553 aaPredicted RBP23.31■■□□□ 1.32
PHGDH-204ENST00000469443 ZNRF3Q9ULT6 936 aa23.31■■□□□ 1.32
PHGDH-204ENST00000469443 E9PSI1 815 aa23.3■■□□□ 1.32
PHGDH-204ENST00000469443 CTSWP56202 376 aa23.3■■□□□ 1.32
PHGDH-204ENST00000469443 UBE3BQ7Z3V4 1068 aa23.3■■□□□ 1.32
PHGDH-204ENST00000469443 EPHX2P34913 555 aa23.29■■□□□ 1.32
PHGDH-204ENST00000469443 GPSM2P81274 684 aa23.29■■□□□ 1.32
PHGDH-204ENST00000469443 LDHDQ86WU2 507 aa23.29■■□□□ 1.32
PHGDH-204ENST00000469443 TTLL11Q8NHH1 800 aa23.29■■□□□ 1.32
PHGDH-204ENST00000469443 ANKRD18AQ8IVF6 992 aa23.28■■□□□ 1.32
PHGDH-204ENST00000469443 RTL9Q8NET4 1388 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 F6X3S4 739 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 C6orf229H3BNL8 230 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
PHGDH-204ENST00000469443 CASP7P55210 303 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 CXCL9Q07325 125 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 SLFN5Q08AF3 891 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 WASHC4Q2M389 1173 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 PNMA8AQ86V59 439 aaPredicted RBP23.27■■□□□ 1.32
PHGDH-204ENST00000469443 PLA2G12BQ9BX93 195 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 PODXL2Q9NZ53 605 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 POLLQ9UGP5 575 aa23.27■■□□□ 1.32
PHGDH-204ENST00000469443 SCNN1DP51172 638 aa23.26■■□□□ 1.31
PHGDH-204ENST00000469443 EAPPQ56P03 285 aaPredicted RBP23.26■■□□□ 1.31
PHGDH-204ENST00000469443 CDC5LQ99459 802 aaKnown RBP23.26■■□□□ 1.31
PHGDH-204ENST00000469443 GREM2Q9H772 168 aa23.26■■□□□ 1.31
PHGDH-204ENST00000469443 HTRA3P83110 453 aa23.25■■□□□ 1.31
PHGDH-204ENST00000469443 BEND3Q5T5X7 828 aa23.25■■□□□ 1.31
PHGDH-204ENST00000469443 DNAJC5GQ8N7S2 189 aa23.25■■□□□ 1.31
PHGDH-204ENST00000469443 TBC1D16Q8TBP0 767 aa23.25■■□□□ 1.31
PHGDH-204ENST00000469443 EYA3Q99504 573 aa23.25■■□□□ 1.31
PHGDH-204ENST00000469443 CIAPIN1Q6FI81 312 aa23.24■■□□□ 1.31
PHGDH-204ENST00000469443 PSME4Q14997 1843 aa23.24■■□□□ 1.31
PHGDH-204ENST00000469443 RIMBP2O15034 1052 aa23.23■■□□□ 1.31
PHGDH-204ENST00000469443 EPS15P42566 896 aa23.23■■□□□ 1.31
PHGDH-204ENST00000469443 TNIP1Q15025 636 aa23.23■■□□□ 1.31
PHGDH-204ENST00000469443 ANKIB1Q9P2G1 1089 aa23.23■■□□□ 1.31
PHGDH-204ENST00000469443 CLEC11AQ9Y240 323 aa23.23■■□□□ 1.31
PHGDH-204ENST00000469443 SCN9AQ15858 1988 aa23.23■■□□□ 1.31
PHGDH-204ENST00000469443 YDJCA8MPS7 323 aa23.22■■□□□ 1.31
PHGDH-204ENST00000469443 RAD17O75943 681 aa23.22■■□□□ 1.31
PHGDH-204ENST00000469443 UFL1O94874 794 aa23.22■■□□□ 1.31
PHGDH-204ENST00000469443 CDCA7LQ96GN5 454 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms