RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 LRP10Q7Z4F1 713 aa21.29■■□□□ 1
MCF2L-221ENST00000469415 SYNE4Q8N205 404 aa21.29■■□□□ 1
MCF2L-221ENST00000469415 JAK2O60674 1132 aa21.29■■□□□ 1
MCF2L-221ENST00000469415 MTMR6Q9Y217 621 aa21.29■■□□□ 1
MCF2L-221ENST00000469415 RFX5P48382 616 aaPredicted RBP21.28■■□□□ 1
MCF2L-221ENST00000469415 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
MCF2L-221ENST00000469415 GPTP24298 496 aa21.28■■□□□ 1
MCF2L-221ENST00000469415 USP25Q9UHP3 1055 aa21.28■■□□□ 1
MCF2L-221ENST00000469415 BRINP3Q76B58 766 aa21.27■■□□□ 1
MCF2L-221ENST00000469415 PPP1R9BQ96SB3 815 aa21.27■■□□□ 1
MCF2L-221ENST00000469415 KDM3BQ7LBC6 1761 aa21.27■■□□□ 1
MCF2L-221ENST00000469415 UTYO14607 1347 aa21.27■■□□□ 1
MCF2L-221ENST00000469415 TAF5LO75529 589 aa21.27■■□□□ 1
MCF2L-221ENST00000469415 RNF20Q5VTR2 975 aa21.27■■□□□ 1
MCF2L-221ENST00000469415 SYAP1Q96A49 352 aaPredicted RBP21.27■■□□□ 1
MCF2L-221ENST00000469415 TCHHQ07283 1943 aa21.27■■□□□ 1
MCF2L-221ENST00000469415 ZSCAN30Q86W11 494 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 PLBD2Q8NHP8 589 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 FAM89AQ96GI7 184 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 COPRSQ9NQ92 184 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 MST1RQ04912 1400 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 SPATA31A3Q5VYP0 1347 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 FAM177BA6PVY3 158 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 RAB11FIP4Q86YS3 637 aa21.26■□□□□ 0.99
MCF2L-221ENST00000469415 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
MCF2L-221ENST00000469415 ZMYND15Q9H091 742 aa21.25■□□□□ 0.99
MCF2L-221ENST00000469415 PSMA5P28066 241 aa21.25■□□□□ 0.99
MCF2L-221ENST00000469415 SLIT3O75094 1523 aa21.25■□□□□ 0.99
MCF2L-221ENST00000469415 HIP1O00291 1037 aa21.24■□□□□ 0.99
MCF2L-221ENST00000469415 CCT2P78371 535 aaKnown RBP21.24■□□□□ 0.99
MCF2L-221ENST00000469415 BRF1Q92994 677 aa21.24■□□□□ 0.99
MCF2L-221ENST00000469415 CWC25Q9NXE8 425 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-221ENST00000469415 COL15A1P39059 1388 aa21.24■□□□□ 0.99
MCF2L-221ENST00000469415 KDM4AO75164 1064 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 Q6ZUG5 572 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 RPS6KB1P23443 525 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 HAND2P61296 217 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 TOB2Q14106 344 aaPredicted RBP21.23■□□□□ 0.99
MCF2L-221ENST00000469415 ASAP1Q9ULH1 1129 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 LMO7Q8WWI1 1683 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 CYP21A2P08686 494 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 GUCY1B3Q02153 619 aa21.23■□□□□ 0.99
MCF2L-221ENST00000469415 ATP5JP18859 108 aa21.22■□□□□ 0.99
MCF2L-221ENST00000469415 TAF7LQ5H9L4 462 aa21.22■□□□□ 0.99
MCF2L-221ENST00000469415 TTLL5Q6EMB2 1281 aa21.22■□□□□ 0.99
MCF2L-221ENST00000469415 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
MCF2L-221ENST00000469415 ZSCAN31Q96LW9 406 aaPredicted RBP21.22■□□□□ 0.99
MCF2L-221ENST00000469415 FOXO4P98177 505 aa21.22■□□□□ 0.99
MCF2L-221ENST00000469415 CKAP2LQ8IYA6 745 aa21.22■□□□□ 0.99
MCF2L-221ENST00000469415 NEK1Q96PY6 1258 aa21.22■□□□□ 0.99
MCF2L-221ENST00000469415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.22■□□□□ 0.99
MCF2L-221ENST00000469415 SH2B1Q9NRF2 756 aaPredicted RBP21.21■□□□□ 0.99
MCF2L-221ENST00000469415 GOLGA6L4A6NEF3 574 aa21.21■□□□□ 0.99
MCF2L-221ENST00000469415 WASHC4Q2M389 1173 aa21.21■□□□□ 0.99
MCF2L-221ENST00000469415 DNAJC10Q8IXB1 793 aa21.21■□□□□ 0.99
MCF2L-221ENST00000469415 NCOA5Q9HCD5 579 aaKnown RBP21.21■□□□□ 0.99
MCF2L-221ENST00000469415 R3HCC1Q9Y3T6 440 aaKnown RBP21.2■□□□□ 0.98
MCF2L-221ENST00000469415 ATP6V1DQ9Y5K8 247 aa21.2■□□□□ 0.98
MCF2L-221ENST00000469415 ZNF335Q9H4Z2 1342 aaPredicted RBP21.2■□□□□ 0.98
MCF2L-221ENST00000469415 ADORA1P30542 326 aa21.2■□□□□ 0.98
MCF2L-221ENST00000469415 UBE2HP62256 183 aa21.2■□□□□ 0.98
MCF2L-221ENST00000469415 TTC6Q86TZ1 520 aa21.2■□□□□ 0.98
MCF2L-221ENST00000469415 TM6SF1Q9BZW5 370 aa21.2■□□□□ 0.98
MCF2L-221ENST00000469415 A0A1B0GUL7 405 aa21.19■□□□□ 0.98
MCF2L-221ENST00000469415 IFIT1P09914 478 aaKnown RBP21.19■□□□□ 0.98
MCF2L-221ENST00000469415 IL2RBP14784 551 aa21.19■□□□□ 0.98
MCF2L-221ENST00000469415 MCMDC2Q4G0Z9 681 aa21.19■□□□□ 0.98
MCF2L-221ENST00000469415 ATG9AQ7Z3C6 839 aa21.19■□□□□ 0.98
MCF2L-221ENST00000469415 C17orf53Q8N3J3 647 aaPredicted RBP21.19■□□□□ 0.98
MCF2L-221ENST00000469415 EPB41L2O43491 1005 aaKnown RBP21.19■□□□□ 0.98
MCF2L-221ENST00000469415 CCDC183Q5T5S1 534 aa21.19■□□□□ 0.98
MCF2L-221ENST00000469415 PAG1Q9NWQ8 432 aa21.19■□□□□ 0.98
MCF2L-221ENST00000469415 SLAIN2Q9P270 581 aa21.19■□□□□ 0.98
MCF2L-221ENST00000469415 APOBRQ0VD83 1088 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 GPHNQ9NQX3 736 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-221ENST00000469415 CASP7P55210 303 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 STOX1Q6ZVD7 989 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 IL17RAQ96F46 866 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 ZNF609O15014 1411 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 H3BQV1 296 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 LIG1P18858 919 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 IFFO2Q5TF58 517 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 ARID3AQ99856 593 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 TMOD3Q9NYL9 352 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 TNS3Q68CZ2 1445 aa21.18■□□□□ 0.98
MCF2L-221ENST00000469415 PHF14O94880 888 aa21.17■□□□□ 0.98
MCF2L-221ENST00000469415 CCDC57Q2TAC2 916 aa21.17■□□□□ 0.98
MCF2L-221ENST00000469415 RABL6Q3YEC7 729 aaPredicted RBP21.17■□□□□ 0.98
MCF2L-221ENST00000469415 FBXW7Q969H0 707 aa21.17■□□□□ 0.98
MCF2L-221ENST00000469415 SPC24Q8NBT2 197 aa21.17■□□□□ 0.98
MCF2L-221ENST00000469415 FTOQ9C0B1 505 aaKnown RBP eCLIP21.17■□□□□ 0.98
MCF2L-221ENST00000469415 WDR17Q8IZU2 1322 aa21.16■□□□□ 0.98
MCF2L-221ENST00000469415 PCDH11XQ9BZA7 1347 aa21.16■□□□□ 0.98
MCF2L-221ENST00000469415 PCDH11YQ9BZA8 1340 aa21.16■□□□□ 0.98
MCF2L-221ENST00000469415 H7C1W4 665 aa21.16■□□□□ 0.98
MCF2L-221ENST00000469415 FAM184AQ8NB25 1140 aa21.16■□□□□ 0.98
MCF2L-221ENST00000469415 HAUS7Q99871 368 aa21.16■□□□□ 0.98
MCF2L-221ENST00000469415 CEP126Q9P2H0 1117 aa21.16■□□□□ 0.98
MCF2L-221ENST00000469415 MED23Q9ULK4 1368 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms