RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
HDAC6-217ENST00000469223 PANK3Q9H999 370 aa17.07■□□□□ 0.32
HDAC6-217ENST00000469223 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
HDAC6-217ENST00000469223 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
HDAC6-217ENST00000469223 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
HDAC6-217ENST00000469223 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-217ENST00000469223 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
HDAC6-217ENST00000469223 GNAT3A8MTJ3 354 aa17.06■□□□□ 0.32
HDAC6-217ENST00000469223 TBC1D8O95759 1140 aa17.06■□□□□ 0.32
HDAC6-217ENST00000469223 SUPT20HQ8NEM7 779 aa17.06■□□□□ 0.32
HDAC6-217ENST00000469223 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
HDAC6-217ENST00000469223 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
HDAC6-217ENST00000469223 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
HDAC6-217ENST00000469223 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-217ENST00000469223 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-217ENST00000469223 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-217ENST00000469223 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
HDAC6-217ENST00000469223 YDJCA8MPS7 323 aa17.04■□□□□ 0.32
HDAC6-217ENST00000469223 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-217ENST00000469223 DCPSQ96C86 337 aaKnown RBP17.04■□□□□ 0.32
HDAC6-217ENST00000469223 RTFDC1Q9BY42 306 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-217ENST00000469223 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-217ENST00000469223 ABCC4O15439 1325 aa17.03■□□□□ 0.32
HDAC6-217ENST00000469223 UBN2Q6ZU65 1347 aa17.03■□□□□ 0.32
HDAC6-217ENST00000469223 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
HDAC6-217ENST00000469223 GPTP24298 496 aa17.03■□□□□ 0.32
HDAC6-217ENST00000469223 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
HDAC6-217ENST00000469223 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.32
HDAC6-217ENST00000469223 GPR25O00155 361 aa17.02■□□□□ 0.32
HDAC6-217ENST00000469223 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.32
HDAC6-217ENST00000469223 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
HDAC6-217ENST00000469223 GGA3Q9NZ52 723 aa17.02■□□□□ 0.32
HDAC6-217ENST00000469223 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-217ENST00000469223 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
HDAC6-217ENST00000469223 ASTN2O75129 1339 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-217ENST00000469223 PSMD14O00487 310 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
HDAC6-217ENST00000469223 NTSR2O95665 410 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 SUSD4Q5VX71 490 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 SULF1Q8IWU6 871 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 MPNDQ8N594 471 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 SLC17A8Q8NDX2 589 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 DPF2Q92785 391 aa16.99■□□□□ 0.31
HDAC6-217ENST00000469223 PSME4Q14997 1843 aa16.98■□□□□ 0.31
HDAC6-217ENST00000469223 FKTNO75072 461 aa16.98■□□□□ 0.31
HDAC6-217ENST00000469223 NOM1Q5C9Z4 860 aaKnown RBP16.98■□□□□ 0.31
HDAC6-217ENST00000469223 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
HDAC6-217ENST00000469223 KIF4BQ2VIQ3 1234 aa16.97■□□□□ 0.31
HDAC6-217ENST00000469223 MOB2Q70IA6 237 aa16.96■□□□□ 0.31
HDAC6-217ENST00000469223 ERVV-1B6SEH8 477 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 MKRN3Q13064 507 aaKnown RBP16.95■□□□□ 0.3
HDAC6-217ENST00000469223 INTS3Q68E01 1043 aaKnown RBP16.95■□□□□ 0.3
HDAC6-217ENST00000469223 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 R3HDMLQ9H3Y0 253 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 DBNDD1Q9H9R9 158 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 LAMA3Q16787 3333 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 UNC80Q8N2C7 3258 aa16.95■□□□□ 0.3
HDAC6-217ENST00000469223 LAMB1P07942 1786 aa16.94■□□□□ 0.3
HDAC6-217ENST00000469223 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
HDAC6-217ENST00000469223 EN2P19622 333 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-217ENST00000469223 SP8Q8IXZ3 490 aa16.94■□□□□ 0.3
HDAC6-217ENST00000469223 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
HDAC6-217ENST00000469223 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
HDAC6-217ENST00000469223 TRIM17Q9Y577 477 aa16.94■□□□□ 0.3
HDAC6-217ENST00000469223 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
HDAC6-217ENST00000469223 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
HDAC6-217ENST00000469223 FKBP1BP68106 108 aa16.93■□□□□ 0.3
HDAC6-217ENST00000469223 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
HDAC6-217ENST00000469223 OTOP1Q7RTM1 612 aa16.92■□□□□ 0.3
HDAC6-217ENST00000469223 ZNF609O15014 1411 aa16.91■□□□□ 0.3
HDAC6-217ENST00000469223 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
HDAC6-217ENST00000469223 TM4SF4P48230 202 aa16.91■□□□□ 0.3
HDAC6-217ENST00000469223 ZNF34Q8IZ26 560 aa16.91■□□□□ 0.3
HDAC6-217ENST00000469223 COL4A1P02462 1669 aa16.91■□□□□ 0.3
HDAC6-217ENST00000469223 H0YGN5 161 aa16.9■□□□□ 0.3
HDAC6-217ENST00000469223 BBOX1O75936 387 aa16.9■□□□□ 0.3
HDAC6-217ENST00000469223 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
HDAC6-217ENST00000469223 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-217ENST00000469223 MCM10Q7L590 875 aa16.9■□□□□ 0.3
HDAC6-217ENST00000469223 PPP1R42Q7Z4L9 355 aa16.9■□□□□ 0.3
HDAC6-217ENST00000469223 CFHR5Q9BXR6 569 aa16.9■□□□□ 0.3
HDAC6-217ENST00000469223 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
HDAC6-217ENST00000469223 ECE2O60344 883 aa16.89■□□□□ 0.29
HDAC6-217ENST00000469223 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
HDAC6-217ENST00000469223 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
HDAC6-217ENST00000469223 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
HDAC6-217ENST00000469223 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
HDAC6-217ENST00000469223 RRP7AQ9Y3A4 280 aaKnown RBP16.89■□□□□ 0.29
HDAC6-217ENST00000469223 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
HDAC6-217ENST00000469223 RIMBP2O15034 1052 aa16.88■□□□□ 0.29
HDAC6-217ENST00000469223 MYL6BP14649 208 aa16.88■□□□□ 0.29
HDAC6-217ENST00000469223 GRAPQ13588 217 aa16.88■□□□□ 0.29
HDAC6-217ENST00000469223 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
HDAC6-217ENST00000469223 GRAPLQ8TC17 118 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-217ENST00000469223 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-217ENST00000469223 SCARF1Q14162 830 aa16.87■□□□□ 0.29
HDAC6-217ENST00000469223 TTLL12Q14166 644 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms