RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 FAM161AQ3B820 660 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 NLGN1Q8N2Q7 840 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 UPF1Q92900 1129 aaKnown RBP eCLIP15.9■□□□□ 0.14
RUNX1-213ENST00000469087 LRRCC1Q9C099 1032 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 GREM2Q9H772 168 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 DDX60Q8IY21 1712 aaKnown RBP15.9■□□□□ 0.14
RUNX1-213ENST00000469087 CCDC57Q2TAC2 916 aa15.89■□□□□ 0.13
RUNX1-213ENST00000469087 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
RUNX1-213ENST00000469087 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.13
RUNX1-213ENST00000469087 CARMIL3Q8ND23 1372 aa15.89■□□□□ 0.13
RUNX1-213ENST00000469087 SASH1O94885 1247 aa15.88■□□□□ 0.13
RUNX1-213ENST00000469087 G3BP1Q13283 466 aaKnown RBP eCLIP15.88■□□□□ 0.13
RUNX1-213ENST00000469087 SERPINB2P05120 415 aa15.87■□□□□ 0.13
RUNX1-213ENST00000469087 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
RUNX1-213ENST00000469087 ITGA6P23229 1130 aa15.87■□□□□ 0.13
RUNX1-213ENST00000469087 DDR1Q08345 913 aa15.87■□□□□ 0.13
RUNX1-213ENST00000469087 IFIT5Q13325 482 aaKnown RBP15.87■□□□□ 0.13
RUNX1-213ENST00000469087 OS9Q13438 667 aaPredicted RBP15.87■□□□□ 0.13
RUNX1-213ENST00000469087 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
RUNX1-213ENST00000469087 KIF1BPQ96EK5 621 aa15.87■□□□□ 0.13
RUNX1-213ENST00000469087 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
RUNX1-213ENST00000469087 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
RUNX1-213ENST00000469087 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.87■□□□□ 0.13
RUNX1-213ENST00000469087 POLRMTO00411 1230 aaKnown RBP15.87■□□□□ 0.13
RUNX1-213ENST00000469087 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
RUNX1-213ENST00000469087 PRR5LQ6MZQ0 368 aa15.86■□□□□ 0.13
RUNX1-213ENST00000469087 ATG9AQ7Z3C6 839 aa15.86■□□□□ 0.13
RUNX1-213ENST00000469087 OTUD7AQ8TE49 926 aaPredicted RBP15.86■□□□□ 0.13
RUNX1-213ENST00000469087 PUS3Q9BZE2 481 aaKnown RBP15.86■□□□□ 0.13
RUNX1-213ENST00000469087 PDGFDQ9GZP0 370 aaPredicted RBP15.86■□□□□ 0.13
RUNX1-213ENST00000469087 ANKRD18BA2A2Z9 1011 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 NPHP1O15259 732 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 SF3B3Q15393 1217 aaKnown RBP15.85■□□□□ 0.13
RUNX1-213ENST00000469087 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 ERC1Q8IUD2 1116 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 CNBD1Q8NA66 436 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 NLRP3Q96P20 1036 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 SEC31BQ9NQW1 1179 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 LAMB2P55268 1798 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 QSER1Q2KHR3 1735 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 CCDC152Q4G0S7 254 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 MSL1Q68DK7 614 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 PLEKHM2Q8IWE5 1019 aa15.85■□□□□ 0.13
RUNX1-213ENST00000469087 EYA2O00167 538 aa15.84■□□□□ 0.13
RUNX1-213ENST00000469087 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
RUNX1-213ENST00000469087 CIAO1O76071 339 aa15.83■□□□□ 0.12
RUNX1-213ENST00000469087 MMP10P09238 476 aa15.83■□□□□ 0.12
RUNX1-213ENST00000469087 TAF7LQ5H9L4 462 aa15.83■□□□□ 0.12
RUNX1-213ENST00000469087 CASZ1Q86V15 1759 aa15.82■□□□□ 0.12
RUNX1-213ENST00000469087 TFCP2Q12800 502 aa15.82■□□□□ 0.12
RUNX1-213ENST00000469087 LDHAL6AQ6ZMR3 332 aa15.82■□□□□ 0.12
RUNX1-213ENST00000469087 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
RUNX1-213ENST00000469087 SALL3Q9BXA9 1300 aa15.82■□□□□ 0.12
RUNX1-213ENST00000469087 RTL9Q8NET4 1388 aa15.82■□□□□ 0.12
RUNX1-213ENST00000469087 IL15P40933 162 aaPredicted RBP15.82■□□□□ 0.12
RUNX1-213ENST00000469087 CLASRPQ8N2M8 674 aaKnown RBP15.82■□□□□ 0.12
RUNX1-213ENST00000469087 EAF2Q96CJ1 260 aaPredicted RBP15.82■□□□□ 0.12
RUNX1-213ENST00000469087 RIPOR2Q9Y4F9 1068 aa15.82■□□□□ 0.12
RUNX1-213ENST00000469087 TAF1P21675 1872 aa15.81■□□□□ 0.12
RUNX1-213ENST00000469087 ST5P78524 1137 aa15.8■□□□□ 0.12
RUNX1-213ENST00000469087 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
RUNX1-213ENST00000469087 PDE1AP54750 535 aa15.8■□□□□ 0.12
RUNX1-213ENST00000469087 COL4A1P02462 1669 aa15.79■□□□□ 0.12
RUNX1-213ENST00000469087 TNRC6CQ9HCJ0 1690 aaKnown RBP15.79■□□□□ 0.12
RUNX1-213ENST00000469087 MX1P20591 662 aa15.79■□□□□ 0.12
RUNX1-213ENST00000469087 ILDR2Q71H61 639 aa15.79■□□□□ 0.12
RUNX1-213ENST00000469087 AACSQ86V21 672 aa15.79■□□□□ 0.12
RUNX1-213ENST00000469087 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
RUNX1-213ENST00000469087 OSBPL3Q9H4L5 887 aa15.79■□□□□ 0.12
RUNX1-213ENST00000469087 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
RUNX1-213ENST00000469087 CEP126Q9P2H0 1117 aa15.79■□□□□ 0.12
RUNX1-213ENST00000469087 TNNI3KQ59H18 835 aa15.78■□□□□ 0.12
RUNX1-213ENST00000469087 TSHZ3Q63HK5 1081 aa15.78■□□□□ 0.12
RUNX1-213ENST00000469087 CELF1Q92879 486 aaKnown RBP15.78■□□□□ 0.12
RUNX1-213ENST00000469087 CDC5LQ99459 802 aaKnown RBP15.78■□□□□ 0.12
RUNX1-213ENST00000469087 MPHOSPH8Q99549 860 aa15.78■□□□□ 0.12
RUNX1-213ENST00000469087 STAP2Q9UGK3 403 aa15.78■□□□□ 0.12
RUNX1-213ENST00000469087 FPGT-TNNI3KV9GXZ4 949 aa15.78■□□□□ 0.12
RUNX1-213ENST00000469087 NRXN2Q9P2S2 1712 aa15.78■□□□□ 0.12
RUNX1-213ENST00000469087 RIC1Q4ADV7 1423 aa15.78■□□□□ 0.12
RUNX1-213ENST00000469087 KLRG2A4D1S0 409 aaPredicted RBP15.77■□□□□ 0.12
RUNX1-213ENST00000469087 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
RUNX1-213ENST00000469087 IGHMBP2P38935 993 aaKnown RBP15.77■□□□□ 0.12
RUNX1-213ENST00000469087 TIMM10P62072 90 aa15.77■□□□□ 0.12
RUNX1-213ENST00000469087 CRY2Q49AN0 593 aa15.77■□□□□ 0.12
RUNX1-213ENST00000469087 SLC16A10Q8TF71 515 aa15.77■□□□□ 0.12
RUNX1-213ENST00000469087 RPS8P62241 208 aaKnown RBP15.77■□□□□ 0.11
RUNX1-213ENST00000469087 ANKRD18AQ8IVF6 992 aa15.77■□□□□ 0.11
RUNX1-213ENST00000469087 BRIP1Q9BX63 1249 aa15.77■□□□□ 0.11
RUNX1-213ENST00000469087 GPR108Q9NPR9 543 aa15.77■□□□□ 0.11
RUNX1-213ENST00000469087 TLR7Q9NYK1 1049 aaKnown RBP15.77■□□□□ 0.11
RUNX1-213ENST00000469087 GSPT1P15170 499 aaKnown RBP15.76■□□□□ 0.11
RUNX1-213ENST00000469087 METTL24Q5JXM2 366 aa15.76■□□□□ 0.11
RUNX1-213ENST00000469087 TTC22Q5TAA0 569 aa15.76■□□□□ 0.11
RUNX1-213ENST00000469087 DDX46Q7L014 1031 aaKnown RBP15.76■□□□□ 0.11
RUNX1-213ENST00000469087 VGLL2Q8N8G2 317 aa15.76■□□□□ 0.11
RUNX1-213ENST00000469087 R3HDM1Q15032 1099 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms