RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.17
SNU13-206ENST00000469028 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
SNU13-206ENST00000469028 LTBP3Q9NS15 1303 aa13.95□□□□□ -0.18
SNU13-206ENST00000469028 ALDH1L1O75891 902 aa13.95□□□□□ -0.18
SNU13-206ENST00000469028 CTSWP56202 376 aa13.95□□□□□ -0.18
SNU13-206ENST00000469028 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
SNU13-206ENST00000469028 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
SNU13-206ENST00000469028 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
SNU13-206ENST00000469028 PLA2G12BQ9BX93 195 aa13.95□□□□□ -0.18
SNU13-206ENST00000469028 SEC31BQ9NQW1 1179 aa13.95□□□□□ -0.18
SNU13-206ENST00000469028 LRRC37AA6NMS7 1700 aa13.94□□□□□ -0.18
SNU13-206ENST00000469028 GRM8O00222 908 aa13.94□□□□□ -0.18
SNU13-206ENST00000469028 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
SNU13-206ENST00000469028 TTLL11Q8NHH1 800 aa13.94□□□□□ -0.18
SNU13-206ENST00000469028 TAOK3Q9H2K8 898 aa13.94□□□□□ -0.18
SNU13-206ENST00000469028 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
SNU13-206ENST00000469028 ATP6V0A2Q9Y487 856 aa13.94□□□□□ -0.18
SNU13-206ENST00000469028 MYH3P11055 1940 aa13.94□□□□□ -0.18
SNU13-206ENST00000469028 KIF16BQ96L93 1317 aa13.93□□□□□ -0.18
SNU13-206ENST00000469028 BBOX1O75936 387 aa13.93□□□□□ -0.18
SNU13-206ENST00000469028 FKBP4Q02790 459 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNU13-206ENST00000469028 CCDC152Q4G0S7 254 aa13.93□□□□□ -0.18
SNU13-206ENST00000469028 TNNQ9UQP3 1299 aa13.93□□□□□ -0.18
SNU13-206ENST00000469028 UTYO14607 1347 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
SNU13-206ENST00000469028 LMNB1P20700 586 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 FOXO4P98177 505 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 CC2D2BQ6DHV5 1058 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 RTKN2Q8IZC4 609 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 ZNF784Q8NCA9 323 aaPredicted RBP13.92□□□□□ -0.18
SNU13-206ENST00000469028 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
SNU13-206ENST00000469028 GREM2Q9H772 168 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 TIAM2Q8IVF5 1701 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
SNU13-206ENST00000469028 CCDC88AQ3V6T2 1871 aa13.91□□□□□ -0.18
SNU13-206ENST00000469028 CSF1RP07333 972 aa13.91□□□□□ -0.18
SNU13-206ENST00000469028 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
SNU13-206ENST00000469028 SP8Q8IXZ3 490 aa13.91□□□□□ -0.18
SNU13-206ENST00000469028 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
SNU13-206ENST00000469028 KAZALD1Q96I82 304 aa13.91□□□□□ -0.18
SNU13-206ENST00000469028 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
SNU13-206ENST00000469028 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
SNU13-206ENST00000469028 TRIM27P14373 513 aa13.9□□□□□ -0.18
SNU13-206ENST00000469028 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
SNU13-206ENST00000469028 FRAT1Q92837 279 aaPredicted RBP13.9□□□□□ -0.18
SNU13-206ENST00000469028 PSMD1Q99460 953 aa13.9□□□□□ -0.18
SNU13-206ENST00000469028 ZNF277Q9NRM2 450 aaPredicted RBP13.9□□□□□ -0.18
SNU13-206ENST00000469028 COL4A5P29400 1685 aa13.9□□□□□ -0.18
SNU13-206ENST00000469028 DICER1Q9UPY3 1922 aaKnown RBP13.9□□□□□ -0.18
SNU13-206ENST00000469028 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
SNU13-206ENST00000469028 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
SNU13-206ENST00000469028 ATF7IPQ6VMQ6 1270 aa13.89□□□□□ -0.19
SNU13-206ENST00000469028 TMC4Q7Z404 712 aa13.89□□□□□ -0.19
SNU13-206ENST00000469028 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
SNU13-206ENST00000469028 SPEF2Q9C093 1822 aa13.88□□□□□ -0.19
SNU13-206ENST00000469028 ITGA6P23229 1130 aa13.88□□□□□ -0.19
SNU13-206ENST00000469028 IARSP41252 1262 aaKnown RBP13.88□□□□□ -0.19
SNU13-206ENST00000469028 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
SNU13-206ENST00000469028 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
SNU13-206ENST00000469028 RTFDC1Q9BY42 306 aaPredicted RBP13.88□□□□□ -0.19
SNU13-206ENST00000469028 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
SNU13-206ENST00000469028 GPSM2P81274 684 aa13.87□□□□□ -0.19
SNU13-206ENST00000469028 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
SNU13-206ENST00000469028 INTS3Q68E01 1043 aaKnown RBP13.87□□□□□ -0.19
SNU13-206ENST00000469028 LMBR1LQ6UX01 489 aa13.87□□□□□ -0.19
SNU13-206ENST00000469028 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
SNU13-206ENST00000469028 ANKRD18AQ8IVF6 992 aa13.87□□□□□ -0.19
SNU13-206ENST00000469028 MPNDQ8N594 471 aa13.87□□□□□ -0.19
SNU13-206ENST00000469028 ANKRD44Q8N8A2 993 aa13.87□□□□□ -0.19
SNU13-206ENST00000469028 ZNF526Q8TF50 670 aaPredicted RBP13.87□□□□□ -0.19
SNU13-206ENST00000469028 CDC5LQ99459 802 aaKnown RBP13.87□□□□□ -0.19
SNU13-206ENST00000469028 TMX4Q9H1E5 349 aaPredicted RBP13.87□□□□□ -0.19
SNU13-206ENST00000469028 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
SNU13-206ENST00000469028 RABL6Q3YEC7 729 aaPredicted RBP13.86□□□□□ -0.19
SNU13-206ENST00000469028 CLUAP1Q96AJ1 413 aa13.86□□□□□ -0.19
SNU13-206ENST00000469028 BICC1Q9H694 974 aaKnown RBP13.86□□□□□ -0.19
SNU13-206ENST00000469028 AOC3Q16853 763 aa13.85□□□□□ -0.19
SNU13-206ENST00000469028 MEIS3Q99687 375 aa13.85□□□□□ -0.19
SNU13-206ENST00000469028 BSDC1Q9NW68 430 aaPredicted RBP13.85□□□□□ -0.19
SNU13-206ENST00000469028 POLLQ9UGP5 575 aa13.85□□□□□ -0.19
SNU13-206ENST00000469028 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
SNU13-206ENST00000469028 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
SNU13-206ENST00000469028 ANKRD18BA2A2Z9 1011 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 IGHMBP2P38935 993 aaKnown RBP13.84□□□□□ -0.19
SNU13-206ENST00000469028 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
SNU13-206ENST00000469028 TMEM57Q8N5G2 664 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 TBC1D16Q8TBP0 767 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 ZNF594Q96JF6 807 aaPredicted RBP13.84□□□□□ -0.19
SNU13-206ENST00000469028 GPR101Q96P66 508 aaPredicted RBP13.84□□□□□ -0.19
SNU13-206ENST00000469028 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 RCAN3Q9UKA8 241 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 ZNF541Q9H0D2 1346 aa13.84□□□□□ -0.19
SNU13-206ENST00000469028 RLBP1P12271 317 aa13.83□□□□□ -0.2
SNU13-206ENST00000469028 KIAA2012Q0VF49 1180 aa13.83□□□□□ -0.2
SNU13-206ENST00000469028 LARGE2Q8N3Y3 721 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms