RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 KIF14Q15058 1648 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 ZNF213O14771 459 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 HMGB1P09429 215 aaKnown RBP12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 MNAT1P51948 309 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 CWF19L2Q2TBE0 894 aaKnown RBP12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 RNF187Q5TA31 235 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 CDC37L1Q7L3B6 337 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 CABP4P57796 275 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 TXLNBQ8N3L3 684 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 CARD6Q9BX69 1037 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 VPS18Q9P253 973 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 SSBP05455 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 RHOXF2BP0C7M4 288 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 EVCP57679 992 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 RHOXF2Q9BQY4 288 aa12.22□□□□□ -0.45
TRAPPC10-207ENST00000468864 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 USP8P40818 1118 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 STIM1Q13586 685 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 ABCF2Q9UG63 623 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 SHTN1A0MZ66 631 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 ERCC6LQ2NKX8 1250 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 CTR9Q6PD62 1173 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 FAM227BQ96M60 508 aa12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 SOS1Q07889 1333 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC10-207ENST00000468864 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.46
TRAPPC10-207ENST00000468864 SGSM2O43147 1006 aa12.21□□□□□ -0.46
TRAPPC10-207ENST00000468864 AFMP43652 599 aa12.21□□□□□ -0.46
TRAPPC10-207ENST00000468864 GTF2A1P52655 376 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC10-207ENST00000468864 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.46
TRAPPC10-207ENST00000468864 JAK2O60674 1132 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 STX17P56962 302 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 NDUFB9Q9Y6M9 179 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 A0A087WWV3 80 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 KRBA2Q6ZNG9 492 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 NCOA5Q9HCD5 579 aaKnown RBP12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 HMG20BQ9P0W2 317 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 ATP10BO94823 1461 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 NPC1L1Q9UHC9 1359 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 LAMC1P11047 1609 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 PTPDC1A2A3K4 754 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 IFIT3O14879 490 aaKnown RBP12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 IARSP41252 1262 aaKnown RBP12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 DNAJC21Q5F1R6 531 aaKnown RBP12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 UNC13BO14795 1591 aa12.2□□□□□ -0.46
TRAPPC10-207ENST00000468864 G3V3G9 751 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 N4BP3O15049 544 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 SPTLC2O15270 562 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 CT47A1Q5JQC4 288 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 KLHDC4Q8TBB5 520 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 RABEP2Q9H5N1 569 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 ACEP12821 1306 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 PIK3R4Q99570 1358 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 GOLGA8AA7E2F4 631 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 RXRAP19793 462 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 SIRT2Q8IXJ6 389 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 DRC1Q96MC2 740 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 MAP9Q49MG5 647 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 ZFYVE27Q5T4F4 411 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
TRAPPC10-207ENST00000468864 TTC6Q86TZ1 520 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 SLC26A6Q9BXS9 759 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 ZBTB3Q9H5J0 574 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 JADE2Q9NQC1 790 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 BCCIPQ9P287 314 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 ATP2C2O75185 946 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 NAPBQ9H115 298 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 DMTNQ08495 405 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 GIMAP7Q8NHV1 300 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 LRP2BPQ9P2M1 347 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 SLC12A7Q9Y666 1083 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 INSRP06213 1382 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 NR1I2O75469 434 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 MICALL1Q8N3F8 863 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 ALG1Q9BT22 464 aa12.18□□□□□ -0.46
TRAPPC10-207ENST00000468864 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
TRAPPC10-207ENST00000468864 GOLGA6L9A6NEM1 432 aa12.17□□□□□ -0.46
TRAPPC10-207ENST00000468864 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC10-207ENST00000468864 SPA17Q15506 151 aa12.17□□□□□ -0.46
TRAPPC10-207ENST00000468864 ME3Q16798 604 aa12.17□□□□□ -0.46
TRAPPC10-207ENST00000468864 CLSTN2Q9H4D0 955 aa12.17□□□□□ -0.46
TRAPPC10-207ENST00000468864 RAD50Q92878 1312 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms