RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 SERPINB2P05120 415 aa21.76■■□□□ 1.07
RPL39-202ENST00000468844 FAM161AQ3B820 660 aa21.76■■□□□ 1.07
RPL39-202ENST00000468844 PRR5LQ6MZQ0 368 aa21.76■■□□□ 1.07
RPL39-202ENST00000468844 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
RPL39-202ENST00000468844 CNBD1Q8NA66 436 aa21.76■■□□□ 1.07
RPL39-202ENST00000468844 KLHDC4Q8TBB5 520 aa21.76■■□□□ 1.07
RPL39-202ENST00000468844 CCDC85AQ96PX6 553 aaPredicted RBP21.76■■□□□ 1.07
RPL39-202ENST00000468844 PA2G4Q9UQ80 394 aaKnown RBP21.76■■□□□ 1.07
RPL39-202ENST00000468844 SLC10A5Q5PT55 438 aa21.76■■□□□ 1.07
RPL39-202ENST00000468844 COL4A1P02462 1669 aa21.75■■□□□ 1.07
RPL39-202ENST00000468844 MMP10P09238 476 aa21.74■■□□□ 1.07
RPL39-202ENST00000468844 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
RPL39-202ENST00000468844 PTPN12Q05209 780 aaKnown RBP21.74■■□□□ 1.07
RPL39-202ENST00000468844 C3orf67Q6ZVT6 689 aa21.74■■□□□ 1.07
RPL39-202ENST00000468844 GREM2Q9H772 168 aa21.74■■□□□ 1.07
RPL39-202ENST00000468844 NPHP1O15259 732 aa21.74■■□□□ 1.07
RPL39-202ENST00000468844 SURF6O75683 361 aaKnown RBP21.74■■□□□ 1.07
RPL39-202ENST00000468844 A0A1B0GUL6 1792 aa21.74■■□□□ 1.07
RPL39-202ENST00000468844 RIC1Q4ADV7 1423 aa21.74■■□□□ 1.07
RPL39-202ENST00000468844 SKAP1Q86WV1 359 aa21.73■■□□□ 1.07
RPL39-202ENST00000468844 COPRSQ9NQ92 184 aa21.73■■□□□ 1.07
RPL39-202ENST00000468844 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
RPL39-202ENST00000468844 LRP5O75197 1615 aa21.73■■□□□ 1.07
RPL39-202ENST00000468844 CACNA1SQ13698 1873 aa21.73■■□□□ 1.07
RPL39-202ENST00000468844 COL11A2P13942 1736 aaPredicted RBP21.73■■□□□ 1.07
RPL39-202ENST00000468844 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
RPL39-202ENST00000468844 CCDC57Q2TAC2 916 aa21.72■■□□□ 1.07
RPL39-202ENST00000468844 APBB1O00213 710 aa21.71■■□□□ 1.07
RPL39-202ENST00000468844 ITGA6P23229 1130 aa21.71■■□□□ 1.07
RPL39-202ENST00000468844 R3HDM1Q15032 1099 aaKnown RBP21.71■■□□□ 1.07
RPL39-202ENST00000468844 SLC16A10Q8TF71 515 aa21.71■■□□□ 1.07
RPL39-202ENST00000468844 SIL1Q9H173 461 aa21.71■■□□□ 1.07
RPL39-202ENST00000468844 NUCB1Q02818 461 aa21.7■■□□□ 1.07
RPL39-202ENST00000468844 IFIT5Q13325 482 aaKnown RBP21.7■■□□□ 1.07
RPL39-202ENST00000468844 SF3B3Q15393 1217 aaKnown RBP21.7■■□□□ 1.07
RPL39-202ENST00000468844 ANKRD45Q5TZF3 282 aa21.7■■□□□ 1.07
RPL39-202ENST00000468844 ZNF594Q96JF6 807 aaPredicted RBP21.7■■□□□ 1.07
RPL39-202ENST00000468844 PARP3Q9Y6F1 533 aa21.7■■□□□ 1.07
RPL39-202ENST00000468844 RTL9Q8NET4 1388 aa21.7■■□□□ 1.07
RPL39-202ENST00000468844 ST5P78524 1137 aa21.7■■□□□ 1.06
RPL39-202ENST00000468844 CCDC152Q4G0S7 254 aa21.7■■□□□ 1.06
RPL39-202ENST00000468844 NLRP3Q96P20 1036 aa21.7■■□□□ 1.06
RPL39-202ENST00000468844 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
RPL39-202ENST00000468844 CHD1LQ86WJ1 897 aa21.68■■□□□ 1.06
RPL39-202ENST00000468844 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
RPL39-202ENST00000468844 ANKRD18BA2A2Z9 1011 aa21.68■■□□□ 1.06
RPL39-202ENST00000468844 LNPKQ9C0E8 428 aa21.68■■□□□ 1.06
RPL39-202ENST00000468844 SMARCA5O60264 1052 aaPredicted RBP21.67■■□□□ 1.06
RPL39-202ENST00000468844 HSP90AB4PQ58FF6 505 aa21.67■■□□□ 1.06
RPL39-202ENST00000468844 LRRCC1Q9C099 1032 aa21.67■■□□□ 1.06
RPL39-202ENST00000468844 UTRNP46939 3433 aa21.67■■□□□ 1.06
RPL39-202ENST00000468844 RAB11FIP3O75154 756 aa21.67■■□□□ 1.06
RPL39-202ENST00000468844 G3BP1Q13283 466 aaKnown RBP eCLIP21.67■■□□□ 1.06
RPL39-202ENST00000468844 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
RPL39-202ENST00000468844 SASH1O94885 1247 aa21.66■■□□□ 1.06
RPL39-202ENST00000468844 OS9Q13438 667 aaPredicted RBP21.66■■□□□ 1.06
RPL39-202ENST00000468844 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
RPL39-202ENST00000468844 DLEC1Q9Y238 1755 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 LRRC24Q50LG9 513 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 ATG9AQ7Z3C6 839 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 KIF1BPQ96EK5 621 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
RPL39-202ENST00000468844 EYA2O00167 538 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 ZBTB7AO95365 584 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 PDE4AP27815 886 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 CRY2Q49AN0 593 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 TAF7LQ5H9L4 462 aa21.65■■□□□ 1.06
RPL39-202ENST00000468844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.65■■□□□ 1.06
RPL39-202ENST00000468844 ERC1Q8IUD2 1116 aa21.64■■□□□ 1.05
RPL39-202ENST00000468844 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
RPL39-202ENST00000468844 BRIP1Q9BX63 1249 aa21.63■■□□□ 1.05
RPL39-202ENST00000468844 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
RPL39-202ENST00000468844 FBXO3Q9UK99 471 aa21.63■■□□□ 1.05
RPL39-202ENST00000468844 KLRG2A4D1S0 409 aaPredicted RBP21.63■■□□□ 1.05
RPL39-202ENST00000468844 CIAO1O76071 339 aa21.63■■□□□ 1.05
RPL39-202ENST00000468844 MTFR1LQ9H019 292 aa21.63■■□□□ 1.05
RPL39-202ENST00000468844 RGS3P49796 1198 aa21.62■■□□□ 1.05
RPL39-202ENST00000468844 LDHAL6AQ6ZMR3 332 aa21.62■■□□□ 1.05
RPL39-202ENST00000468844 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
RPL39-202ENST00000468844 CELF1Q92879 486 aaKnown RBP21.61■■□□□ 1.05
RPL39-202ENST00000468844 ZBTB47Q9UFB7 747 aaPredicted RBP21.61■■□□□ 1.05
RPL39-202ENST00000468844 C16orf71Q8IYS4 520 aaPredicted RBP21.61■■□□□ 1.05
RPL39-202ENST00000468844 CDC5LQ99459 802 aaKnown RBP21.61■■□□□ 1.05
RPL39-202ENST00000468844 TSHZ2Q9NRE2 1034 aa21.61■■□□□ 1.05
RPL39-202ENST00000468844 RIPOR2Q9Y4F9 1068 aa21.61■■□□□ 1.05
RPL39-202ENST00000468844 AK9Q5TCS8 1911 aa21.6■■□□□ 1.05
RPL39-202ENST00000468844 ARAP2Q8WZ64 1704 aa21.6■■□□□ 1.05
RPL39-202ENST00000468844 DDX46Q7L014 1031 aaKnown RBP21.6■■□□□ 1.05
RPL39-202ENST00000468844 C10orf71Q711Q0 1435 aa21.6■■□□□ 1.05
RPL39-202ENST00000468844 KIAA1551Q9HCM1 1747 aa21.59■■□□□ 1.05
RPL39-202ENST00000468844 IGHMBP2P38935 993 aaKnown RBP21.59■■□□□ 1.05
RPL39-202ENST00000468844 TFCP2Q12800 502 aa21.59■■□□□ 1.05
RPL39-202ENST00000468844 OTUD7AQ8TE49 926 aaPredicted RBP21.59■■□□□ 1.05
RPL39-202ENST00000468844 MPHOSPH8Q99549 860 aa21.59■■□□□ 1.05
RPL39-202ENST00000468844 CNNM1Q9NRU3 951 aa21.59■■□□□ 1.05
RPL39-202ENST00000468844 ATF5Q9Y2D1 282 aaPredicted RBP21.59■■□□□ 1.05
RPL39-202ENST00000468844 LRRC37AA6NMS7 1700 aa21.59■■□□□ 1.05
RPL39-202ENST00000468844 ANKRD18AQ8IVF6 992 aa21.58■■□□□ 1.04
RPL39-202ENST00000468844 RPGRQ92834 1020 aaKnown RBP21.58■■□□□ 1.04
RPL39-202ENST00000468844 SALL3Q9BXA9 1300 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms