RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 TRIP4Q15650 581 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-207ENST00000468723 LINC00114Q6XXX2 140 aa7.5□□□□□ -1.21
GPNMB-207ENST00000468723 PIK3R5Q8WYR1 880 aa7.5□□□□□ -1.21
GPNMB-207ENST00000468723 MPSTP25325 297 aa7.49□□□□□ -1.21
GPNMB-207ENST00000468723 ZNF211Q13398 564 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-207ENST00000468723 TMEM151AQ8N4L1 468 aa7.49□□□□□ -1.21
GPNMB-207ENST00000468723 SUV39H2Q9H5I1 410 aa7.49□□□□□ -1.21
GPNMB-207ENST00000468723 EFCC1Q9HA90 598 aa7.49□□□□□ -1.21
GPNMB-207ENST00000468723 SLC6A14Q9UN76 642 aa7.49□□□□□ -1.21
GPNMB-207ENST00000468723 UBAP1LF5GYI3 381 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 M0R082 166 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 EGFRP00533 1210 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 ALBP02768 609 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 NOM1Q5C9Z4 860 aaKnown RBP7.48□□□□□ -1.21
GPNMB-207ENST00000468723 DHX32Q7L7V1 743 aaKnown RBP7.48□□□□□ -1.21
GPNMB-207ENST00000468723 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 NUDT8Q8WV74 236 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 ZNF587Q96SQ5 575 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-207ENST00000468723 FAM13BQ9NYF5 915 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
GPNMB-207ENST00000468723 ZBTB42B2RXF5 422 aa7.47□□□□□ -1.21
GPNMB-207ENST00000468723 CPB1P15086 417 aa7.47□□□□□ -1.21
GPNMB-207ENST00000468723 EIF1AXP47813 144 aaKnown RBP7.47□□□□□ -1.21
GPNMB-207ENST00000468723 DNM1Q05193 864 aaKnown RBP7.47□□□□□ -1.21
GPNMB-207ENST00000468723 AAMPQ13685 434 aa7.47□□□□□ -1.21
GPNMB-207ENST00000468723 KANK3Q6NY19 840 aa7.47□□□□□ -1.21
GPNMB-207ENST00000468723 HFE2Q6ZVN8 426 aa7.47□□□□□ -1.21
GPNMB-207ENST00000468723 MICALL1Q8N3F8 863 aa7.47□□□□□ -1.21
GPNMB-207ENST00000468723 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
GPNMB-207ENST00000468723 GNB5O14775 395 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 MMP20O60882 483 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 MAP3K6O95382 1288 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 SERPINB4P48594 390 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 B4GALNT3Q6L9W6 998 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 PSAPL1Q6NUJ1 521 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 FAM35AQ86V20 835 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 KCTD17Q8N5Z5 321 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 EDEM1Q92611 657 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 NUDT16Q96DE0 195 aaKnown RBP7.46□□□□□ -1.22
GPNMB-207ENST00000468723 NAGPAQ9UK23 515 aa7.46□□□□□ -1.22
GPNMB-207ENST00000468723 COL8A1P27658 744 aa7.45□□□□□ -1.22
GPNMB-207ENST00000468723 NLRP13Q86W25 1043 aa7.45□□□□□ -1.22
GPNMB-207ENST00000468723 TRIM11Q96F44 468 aa7.45□□□□□ -1.22
GPNMB-207ENST00000468723 JPH1Q9HDC5 661 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-207ENST00000468723 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
GPNMB-207ENST00000468723 FNDC3AQ9Y2H6 1198 aaKnown RBP7.45□□□□□ -1.22
GPNMB-207ENST00000468723 J3QW42 95 aa7.44□□□□□ -1.22
GPNMB-207ENST00000468723 PSAPP07602 524 aa7.44□□□□□ -1.22
GPNMB-207ENST00000468723 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-207ENST00000468723 FKBP4Q02790 459 aaKnown RBP eCLIP7.44□□□□□ -1.22
GPNMB-207ENST00000468723 C20orf204Q6ZNR8 217 aa7.44□□□□□ -1.22
GPNMB-207ENST00000468723 DCAF5Q96JK2 942 aa7.44□□□□□ -1.22
GPNMB-207ENST00000468723 NSUN5Q96P11 429 aaKnown RBP7.44□□□□□ -1.22
GPNMB-207ENST00000468723 PLVAPQ9BX97 442 aa7.44□□□□□ -1.22
GPNMB-207ENST00000468723 A6NHS1 94 aa7.43□□□□□ -1.22
GPNMB-207ENST00000468723 PIK3R2O00459 728 aa7.43□□□□□ -1.22
GPNMB-207ENST00000468723 PDE4CQ08493 712 aa7.43□□□□□ -1.22
GPNMB-207ENST00000468723 C8orf34Q49A92 452 aa7.43□□□□□ -1.22
GPNMB-207ENST00000468723 TRPM4Q8TD43 1214 aa7.43□□□□□ -1.22
GPNMB-207ENST00000468723 GGNBP2Q9H3C7 697 aa7.43□□□□□ -1.22
GPNMB-207ENST00000468723 LILRB5O75023 590 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 RGS9O75916 674 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-207ENST00000468723 FAM13AO94988 1023 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 PDGFAP04085 211 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 EIF2AK2P19525 551 aaKnown RBP7.42□□□□□ -1.22
GPNMB-207ENST00000468723 NRLP54845 237 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 GPLD1P80108 840 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 PLAURQ03405 335 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 SF3B2Q13435 895 aaKnown RBP7.42□□□□□ -1.22
GPNMB-207ENST00000468723 COL9A3Q14050 684 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-207ENST00000468723 PCSK7Q16549 785 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 PERM1Q5SV97 790 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 ALKBH2Q6NS38 261 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 ELMSAN1Q6PJG2 1045 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 POLIQ9UNA4 740 aa7.42□□□□□ -1.22
GPNMB-207ENST00000468723 LOC102724428A0A0B4J2F2 783 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 H3BRB1 525 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 PCSK2P16519 638 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 NPR3P17342 541 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 SIK1P57059 783 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 TTC39BQ5VTQ0 682 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-207ENST00000468723 ZNF438Q7Z4V0 828 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 TTC16Q8NEE8 873 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 LPIN3Q9BQK8 851 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 SMG9Q9H0W8 520 aaKnown RBP7.41□□□□□ -1.22
GPNMB-207ENST00000468723 TUT1Q9H6E5 874 aaKnown RBP7.41□□□□□ -1.22
GPNMB-207ENST00000468723 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 CCDC87Q9NVE4 849 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 NOP53Q9NZM5 478 aaKnown RBP7.41□□□□□ -1.22
GPNMB-207ENST00000468723 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
GPNMB-207ENST00000468723 KRBA1A5PL33 1030 aa7.4□□□□□ -1.22
GPNMB-207ENST00000468723 ICMTO60725 284 aa7.4□□□□□ -1.22
GPNMB-207ENST00000468723 CYP2E1P05181 493 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-207ENST00000468723 NID1P14543 1247 aa7.4□□□□□ -1.22
GPNMB-207ENST00000468723 MZF1P28698 734 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-207ENST00000468723 TRAPPC3LQ5T215 181 aa7.4□□□□□ -1.22
GPNMB-207ENST00000468723 ABI2Q9NYB9 513 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-207ENST00000468723 FZD6O60353 706 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms