RNA–Protein interactions for RNA: ENST00000468476.1

PABPC4-209, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 3,592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-209ENST00000468476 GOLIM4O00461 696 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 PRPF40AO75400 957 aaKnown RBP10.67□□□□□ -0.7
PABPC4-209ENST00000468476 KCNQ4P56696 695 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 EPHA10Q5JZY3 1008 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 NPHP1O15259 732 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 CHMLP26374 656 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 FOSBP53539 338 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
PABPC4-209ENST00000468476 SSH3Q8TE77 659 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 XRN1Q8IZH2 1706 aaKnown RBP10.67□□□□□ -0.7
PABPC4-209ENST00000468476 MST1RQ04912 1400 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 KRT222Q8N1A0 295 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 BABAM1Q9NWV8 329 aa10.67□□□□□ -0.7
PABPC4-209ENST00000468476 RAD51AP2Q09MP3 1159 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 GCKRQ14397 625 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 PRPF40BQ6NWY9 871 aaKnown RBP10.66□□□□□ -0.7
PABPC4-209ENST00000468476 FAM89AQ96GI7 184 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 FMN2Q9NZ56 1722 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 CEMIPQ8WUJ3 1361 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 NEURL1BA8MQ27 555 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 EXOC5O00471 708 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 RAB11FIP3O75154 756 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 FAM182BQ5T319 152 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 PDLIM2Q96JY6 352 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 TIMM10P62072 90 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
PABPC4-209ENST00000468476 TFCP2Q12800 502 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 DDX46Q7L014 1031 aaKnown RBP10.66□□□□□ -0.7
PABPC4-209ENST00000468476 ECHDC1Q9NTX5 307 aa10.66□□□□□ -0.7
PABPC4-209ENST00000468476 DHX16O60231 1041 aaKnown RBP10.65□□□□□ -0.7
PABPC4-209ENST00000468476 SART3Q15020 963 aaKnown RBP10.65□□□□□ -0.7
PABPC4-209ENST00000468476 BICDL1Q6ZP65 573 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
PABPC4-209ENST00000468476 MEGF6O75095 1541 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 TOPAZ1Q8N9V7 1692 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 TULP2O00295 520 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 ALDH1L1O75891 902 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 BAG4O95429 457 aaKnown RBP10.65□□□□□ -0.7
PABPC4-209ENST00000468476 HOXB7P09629 217 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 PKP1Q13835 747 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 RAB3GAP1Q15042 981 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 EAF2Q96CJ1 260 aaPredicted RBP10.65□□□□□ -0.7
PABPC4-209ENST00000468476 FAM212AQ96EL1 285 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 CEP83Q9Y592 693 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 PCDH11XQ9BZA7 1347 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 PCDH11YQ9BZA8 1340 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 LMTK3Q96Q04 1460 aa10.65□□□□□ -0.7
PABPC4-209ENST00000468476 GLRX3O76003 335 aaKnown RBP10.65□□□□□ -0.71
PABPC4-209ENST00000468476 TDO2P48775 406 aa10.65□□□□□ -0.71
PABPC4-209ENST00000468476 STK3Q13188 491 aa10.65□□□□□ -0.71
PABPC4-209ENST00000468476 KIF6Q6ZMV9 814 aa10.65□□□□□ -0.71
PABPC4-209ENST00000468476 ZNF592Q92610 1267 aa10.65□□□□□ -0.71
PABPC4-209ENST00000468476 METTL22Q9BUU2 404 aaPredicted RBP10.65□□□□□ -0.71
PABPC4-209ENST00000468476 IL25Q9H293 177 aa10.65□□□□□ -0.71
PABPC4-209ENST00000468476 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.71
PABPC4-209ENST00000468476 NAA30Q147X3 362 aaPredicted RBP10.64□□□□□ -0.71
PABPC4-209ENST00000468476 SYNE4Q8N205 404 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 FAM227BQ96M60 508 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 NCAPGQ9BPX3 1015 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 CARD10Q9BWT7 1032 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.64□□□□□ -0.71
PABPC4-209ENST00000468476 CHD2O14647 1828 aaKnown RBP10.64□□□□□ -0.71
PABPC4-209ENST00000468476 HSP90AB3PQ58FF7 597 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 ICE2Q659A1 982 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 PIBF1Q8WXW3 757 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 JAKMIP1Q96N16 626 aaKnown RBP10.64□□□□□ -0.71
PABPC4-209ENST00000468476 KIF2CQ99661 725 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 PLCD4Q9BRC7 762 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 ST7Q9NRC1 585 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 KDM4AO75164 1064 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 CHGBP05060 677 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
PABPC4-209ENST00000468476 ERC1Q8IUD2 1116 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 C8orf37Q96NL8 207 aa10.64□□□□□ -0.71
PABPC4-209ENST00000468476 LTN1O94822 1766 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 ADAMTSL3P82987 1691 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 PDIA6Q15084 440 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 SLFNL1Q499Z3 407 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 CWC25Q9NXE8 425 aaPredicted RBP10.63□□□□□ -0.71
PABPC4-209ENST00000468476 RGPD2P0DJD1 1756 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 NBPF26B4DH59 902 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 TRIM66O15016 1216 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 ZNF445P59923 1031 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 DNAJC21Q5F1R6 531 aaKnown RBP10.63□□□□□ -0.71
PABPC4-209ENST00000468476 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
PABPC4-209ENST00000468476 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 GDPD2Q9HCC8 539 aa10.63□□□□□ -0.71
PABPC4-209ENST00000468476 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.63□□□□□ -0.71
PABPC4-209ENST00000468476 ZBTB12Q9Y330 459 aaPredicted RBP10.63□□□□□ -0.71
PABPC4-209ENST00000468476 V9GYY5 206 aaPredicted RBP10.63□□□□□ -0.71
PABPC4-209ENST00000468476 E2F4Q16254 413 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 CCDC57Q2TAC2 916 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 GOLGA6L1Q8N7Z2 621 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms