RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ZNF830Q96NB3 372 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-211ENST00000468468 A0A0D9SFI3 127 aa18.81■□□□□ 0.6
TSPAN4-211ENST00000468468 LARP1BQ659C4 914 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-211ENST00000468468 ABCC6O95255 1503 aa18.81■□□□□ 0.6
TSPAN4-211ENST00000468468 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
TSPAN4-211ENST00000468468 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-211ENST00000468468 COL9A3Q14050 684 aaPredicted RBP18.8■□□□□ 0.6
TSPAN4-211ENST00000468468 KLHDC4Q8TBB5 520 aa18.8■□□□□ 0.6
TSPAN4-211ENST00000468468 FUCA2Q9BTY2 467 aa18.8■□□□□ 0.6
TSPAN4-211ENST00000468468 SNRKQ9NRH2 765 aa18.8■□□□□ 0.6
TSPAN4-211ENST00000468468 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
TSPAN4-211ENST00000468468 C5P01031 1676 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 WDR17Q8IZU2 1322 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 KDM4AO75164 1064 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 BLOC1S2Q6QNY1 142 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 SASS6Q6UVJ0 657 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 LARP1Q6PKG0 1096 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 TTC5Q8N0Z6 440 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 TCEANC2Q96MN5 208 aa18.79■□□□□ 0.6
TSPAN4-211ENST00000468468 CABP4P57796 275 aa18.78■□□□□ 0.6
TSPAN4-211ENST00000468468 PLCB2Q00722 1185 aa18.78■□□□□ 0.6
TSPAN4-211ENST00000468468 NEXNQ0ZGT2 675 aa18.78■□□□□ 0.6
TSPAN4-211ENST00000468468 FAM13BQ9NYF5 915 aa18.78■□□□□ 0.6
TSPAN4-211ENST00000468468 ANKRD1Q15327 319 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 KLHL34Q8N239 644 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 PKD1L3Q7Z443 1732 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 NEURL1BA8MQ27 555 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 KRT85P78386 507 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 CDC37L1Q7L3B6 337 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
TSPAN4-211ENST00000468468 RPS6KB1P23443 525 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 DNTTIP2Q5QJE6 756 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 XAGE3Q8WTP9 111 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 PDIA4P13667 645 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 PDCP20941 246 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 COPS6Q7L5N1 327 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 TTC6Q86TZ1 520 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 ZNF589Q86UQ0 364 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 MYD88Q99836 296 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 MED23Q9ULK4 1368 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 MRC1P22897 1456 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 GCKRQ14397 625 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 FAM173BQ6P4H8 233 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 ZHX1Q9UKY1 873 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-211ENST00000468468 SNRPA1P09661 255 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-211ENST00000468468 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-211ENST00000468468 DYNC1I1O14576 645 aa18.75■□□□□ 0.59
TSPAN4-211ENST00000468468 TOB2Q14106 344 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-211ENST00000468468 EDC3Q96F86 508 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-211ENST00000468468 FMNL2Q96PY5 1086 aa18.75■□□□□ 0.59
TSPAN4-211ENST00000468468 CHMP3Q9Y3E7 222 aa18.75■□□□□ 0.59
TSPAN4-211ENST00000468468 CCDC192P0DO97 292 aa18.74■□□□□ 0.59
TSPAN4-211ENST00000468468 NOLC1Q14978 699 aaKnown RBP eCLIP18.74■□□□□ 0.59
TSPAN4-211ENST00000468468 ALDH8A1Q9H2A2 487 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-211ENST00000468468 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
TSPAN4-211ENST00000468468 STK3Q13188 491 aa18.74■□□□□ 0.59
TSPAN4-211ENST00000468468 METTL22Q9BUU2 404 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-211ENST00000468468 JARID2Q92833 1246 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-211ENST00000468468 HMG20BQ9P0W2 317 aa18.73■□□□□ 0.59
TSPAN4-211ENST00000468468 AP5Z1O43299 807 aa18.73■□□□□ 0.59
TSPAN4-211ENST00000468468 LRP10Q7Z4F1 713 aa18.73■□□□□ 0.59
TSPAN4-211ENST00000468468 PLEKHG2Q9H7P9 1386 aa18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 TAF5LO75529 589 aa18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 ELP1O95163 1332 aa18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 LIG1P18858 919 aa18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 TSGA10IPQ3SY00 556 aa18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 C17orf53Q8N3J3 647 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-211ENST00000468468 NUP62CLQ9H1M0 184 aa18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 EVA1CP58658 441 aa18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 CAMK4Q16566 473 aa18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 ANKRD13DQ6ZTN6 518 aa18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 MAP7D2Q96T17 732 aa18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 COPRSQ9NQ92 184 aa18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 TFIP11Q9UBB9 837 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 JCADQ9P266 1359 aa18.71■□□□□ 0.59
TSPAN4-211ENST00000468468 IL2RBP14784 551 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 ATP5JP18859 108 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 TFCP2Q12800 502 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 MAP3K11Q16584 847 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 DBNLQ9UJU6 430 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 TNNI3KQ59H18 835 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 SPATA32Q96LK8 384 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 CARD10Q9BWT7 1032 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 FPGT-TNNI3KV9GXZ4 949 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 ABCA3Q99758 1704 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 GOLGA6L4A6NEF3 574 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 USPL1Q5W0Q7 1092 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 SCAND2PQ9GZW5 306 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 NDUFB9Q9Y6M9 179 aa18.7■□□□□ 0.58
TSPAN4-211ENST00000468468 KRT32Q14532 448 aa18.69■□□□□ 0.58
TSPAN4-211ENST00000468468 PARP4Q9UKK3 1724 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms