RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 MAP3K13O43283 966 aa14.38□□□□□ -0.11
COL4A6-205ENST00000468338 PPP1R37O75864 691 aa14.38□□□□□ -0.11
COL4A6-205ENST00000468338 HOXA10P31260 410 aaPredicted RBP14.38□□□□□ -0.11
COL4A6-205ENST00000468338 TWISTNBQ3B726 338 aaPredicted RBP14.38□□□□□ -0.11
COL4A6-205ENST00000468338 PRPF40BQ6NWY9 871 aaKnown RBP14.38□□□□□ -0.11
COL4A6-205ENST00000468338 FBXO22Q8NEZ5 403 aa14.38□□□□□ -0.11
COL4A6-205ENST00000468338 UTP14AQ9BVJ6 771 aaKnown RBP14.38□□□□□ -0.11
COL4A6-205ENST00000468338 PHAXQ9H814 394 aaKnown RBP14.38□□□□□ -0.11
COL4A6-205ENST00000468338 SALL2Q9Y467 1007 aaPredicted RBP14.38□□□□□ -0.11
COL4A6-205ENST00000468338 PRELPP51888 382 aa14.37□□□□□ -0.11
COL4A6-205ENST00000468338 KIF12Q96FN5 646 aa14.37□□□□□ -0.11
COL4A6-205ENST00000468338 C21orf2O43822 256 aa14.36□□□□□ -0.11
COL4A6-205ENST00000468338 VAMP4O75379 141 aa14.36□□□□□ -0.11
COL4A6-205ENST00000468338 C9orf131Q5VYM1 1079 aa14.36□□□□□ -0.11
COL4A6-205ENST00000468338 LTBP3Q9NS15 1303 aa14.36□□□□□ -0.11
COL4A6-205ENST00000468338 CACNA1SQ13698 1873 aa14.35□□□□□ -0.11
COL4A6-205ENST00000468338 CCDC88AQ3V6T2 1871 aa14.35□□□□□ -0.11
COL4A6-205ENST00000468338 ALDH1B1P30837 517 aa14.35□□□□□ -0.11
COL4A6-205ENST00000468338 GOLGA2Q08379 1002 aa14.35□□□□□ -0.11
COL4A6-205ENST00000468338 SOGA3Q5TF21 947 aa14.35□□□□□ -0.11
COL4A6-205ENST00000468338 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
COL4A6-205ENST00000468338 SH3TC1Q8TE82 1336 aa14.35□□□□□ -0.11
COL4A6-205ENST00000468338 ZC3H4Q9UPT8 1303 aaKnown RBP14.35□□□□□ -0.11
COL4A6-205ENST00000468338 SNED1Q8TER0 1413 aa14.34□□□□□ -0.11
COL4A6-205ENST00000468338 LMNB1P20700 586 aa14.34□□□□□ -0.11
COL4A6-205ENST00000468338 RASSF7Q02833 373 aa14.34□□□□□ -0.11
COL4A6-205ENST00000468338 SYNE4Q8N205 404 aa14.34□□□□□ -0.11
COL4A6-205ENST00000468338 NLRP3Q96P20 1036 aa14.34□□□□□ -0.11
COL4A6-205ENST00000468338 CRAMP1Q96RY5 1269 aa14.34□□□□□ -0.11
COL4A6-205ENST00000468338 TRMT112Q9UI30 125 aaKnown RBP14.34□□□□□ -0.11
COL4A6-205ENST00000468338 DICER1Q9UPY3 1922 aaKnown RBP14.33□□□□□ -0.11
COL4A6-205ENST00000468338 ATP5J2-PTCD1G3V325 749 aa14.33□□□□□ -0.12
COL4A6-205ENST00000468338 EXOSC9Q06265 439 aaKnown RBP14.33□□□□□ -0.12
COL4A6-205ENST00000468338 RIC3Q7Z5B4 369 aa14.33□□□□□ -0.12
COL4A6-205ENST00000468338 STK31Q9BXU1 1019 aa14.33□□□□□ -0.12
COL4A6-205ENST00000468338 MYH16Q9H6N6 1097 aa14.33□□□□□ -0.12
COL4A6-205ENST00000468338 RNF181Q9P0P0 153 aa14.33□□□□□ -0.12
COL4A6-205ENST00000468338 LAMB2P55268 1798 aa14.32□□□□□ -0.12
COL4A6-205ENST00000468338 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
COL4A6-205ENST00000468338 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
COL4A6-205ENST00000468338 G2E3Q7L622 706 aa14.32□□□□□ -0.12
COL4A6-205ENST00000468338 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
COL4A6-205ENST00000468338 GPBP1L1Q9HC44 474 aaPredicted RBP14.32□□□□□ -0.12
COL4A6-205ENST00000468338 HCLS1P14317 486 aaPredicted RBP14.31□□□□□ -0.12
COL4A6-205ENST00000468338 CCDC93Q567U6 631 aa14.31□□□□□ -0.12
COL4A6-205ENST00000468338 CC2D2BQ6DHV5 1058 aa14.31□□□□□ -0.12
COL4A6-205ENST00000468338 CCDC191Q8NCU4 936 aa14.31□□□□□ -0.12
COL4A6-205ENST00000468338 RPGRQ92834 1020 aaKnown RBP14.31□□□□□ -0.12
COL4A6-205ENST00000468338 RBM17Q96I25 401 aaKnown RBP14.31□□□□□ -0.12
COL4A6-205ENST00000468338 TAOK3Q9H2K8 898 aa14.31□□□□□ -0.12
COL4A6-205ENST00000468338 DDX60Q8IY21 1712 aaKnown RBP14.31□□□□□ -0.12
COL4A6-205ENST00000468338 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
COL4A6-205ENST00000468338 TCERG1O14776 1098 aaKnown RBP14.3□□□□□ -0.12
COL4A6-205ENST00000468338 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
COL4A6-205ENST00000468338 OLFM4Q6UX06 510 aa14.3□□□□□ -0.12
COL4A6-205ENST00000468338 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
COL4A6-205ENST00000468338 ZBTB38Q8NAP3 1195 aaPredicted RBP14.3□□□□□ -0.12
COL4A6-205ENST00000468338 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
COL4A6-205ENST00000468338 KIF3CO14782 793 aa14.29□□□□□ -0.12
COL4A6-205ENST00000468338 IGKV5-2P06315 115 aa14.29□□□□□ -0.12
COL4A6-205ENST00000468338 FLIIQ13045 1269 aa14.29□□□□□ -0.12
COL4A6-205ENST00000468338 GRIPAP1Q4V328 841 aa14.29□□□□□ -0.12
COL4A6-205ENST00000468338 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
COL4A6-205ENST00000468338 RTKN2Q8IZC4 609 aa14.29□□□□□ -0.12
COL4A6-205ENST00000468338 MYD88Q99836 296 aa14.29□□□□□ -0.12
COL4A6-205ENST00000468338 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
COL4A6-205ENST00000468338 E9PSI1 815 aa14.28□□□□□ -0.12
COL4A6-205ENST00000468338 ABCC4O15439 1325 aa14.28□□□□□ -0.12
COL4A6-205ENST00000468338 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
COL4A6-205ENST00000468338 PDE4AP27815 886 aa14.28□□□□□ -0.12
COL4A6-205ENST00000468338 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL4A6-205ENST00000468338 SLFN5Q08AF3 891 aa14.28□□□□□ -0.12
COL4A6-205ENST00000468338 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
COL4A6-205ENST00000468338 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
COL4A6-205ENST00000468338 PSMD1Q99460 953 aa14.28□□□□□ -0.12
COL4A6-205ENST00000468338 GLTPD2A6NH11 291 aa14.27□□□□□ -0.13
COL4A6-205ENST00000468338 BBOX1O75936 387 aa14.27□□□□□ -0.13
COL4A6-205ENST00000468338 C1QTNF8P60827 252 aa14.27□□□□□ -0.13
COL4A6-205ENST00000468338 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.13
COL4A6-205ENST00000468338 ATP6V0A2Q9Y487 856 aa14.27□□□□□ -0.13
COL4A6-205ENST00000468338 TAF1P21675 1872 aa14.27□□□□□ -0.13
COL4A6-205ENST00000468338 IRS4O14654 1257 aaPredicted RBP14.26□□□□□ -0.13
COL4A6-205ENST00000468338 PPEF1O14829 653 aaPredicted RBP14.26□□□□□ -0.13
COL4A6-205ENST00000468338 ZNF428Q96B54 188 aa14.26□□□□□ -0.13
COL4A6-205ENST00000468338 TIAM2Q8IVF5 1701 aa14.26□□□□□ -0.13
COL4A6-205ENST00000468338 KDM2BQ8NHM5 1336 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 CDHR2Q9BYE9 1310 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 NEURL1BA8MQ27 555 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 GRAPQ13588 217 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 SMYD5Q6GMV2 418 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 DDX46Q7L014 1031 aaKnown RBP14.25□□□□□ -0.13
COL4A6-205ENST00000468338 SLC51AQ86UW1 340 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 SP8Q8IXZ3 490 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-205ENST00000468338 DNAAF4Q8WXU2 420 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
COL4A6-205ENST00000468338 TESPA1A2RU30 521 aaPredicted RBP14.24□□□□□ -0.13
COL4A6-205ENST00000468338 HSP90B1P14625 803 aaKnown RBP14.24□□□□□ -0.13
COL4A6-205ENST00000468338 NEXNQ0ZGT2 675 aa14.24□□□□□ -0.13
COL4A6-205ENST00000468338 FKBP5Q13451 457 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms