RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 RBM46Q8TBY0 533 aaKnown RBP18.7■□□□□ 0.58
COMMD3-206ENST00000468179 GRAPLQ8TC17 118 aaPredicted RBP18.7■□□□□ 0.58
COMMD3-206ENST00000468179 JDP2Q8WYK2 163 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 VPS33BQ9H267 617 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 ABCC4O15439 1325 aa18.7■□□□□ 0.58
COMMD3-206ENST00000468179 TCERG1O14776 1098 aaKnown RBP18.69■□□□□ 0.58
COMMD3-206ENST00000468179 POLA2Q14181 598 aa18.69■□□□□ 0.58
COMMD3-206ENST00000468179 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
COMMD3-206ENST00000468179 SP8Q8IXZ3 490 aa18.69■□□□□ 0.58
COMMD3-206ENST00000468179 FLIIQ13045 1269 aa18.68■□□□□ 0.58
COMMD3-206ENST00000468179 ZBTB22O15209 634 aa18.67■□□□□ 0.58
COMMD3-206ENST00000468179 FSTL1Q12841 308 aa18.67■□□□□ 0.58
COMMD3-206ENST00000468179 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
COMMD3-206ENST00000468179 CACNA1SQ13698 1873 aa18.66■□□□□ 0.58
COMMD3-206ENST00000468179 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
COMMD3-206ENST00000468179 ZNF428Q96B54 188 aa18.66■□□□□ 0.58
COMMD3-206ENST00000468179 ZNF521Q96K83 1311 aa18.66■□□□□ 0.58
COMMD3-206ENST00000468179 E9PSI1 815 aa18.65■□□□□ 0.58
COMMD3-206ENST00000468179 PDE8AO60658 829 aa18.65■□□□□ 0.58
COMMD3-206ENST00000468179 HSPA6P17066 643 aa18.65■□□□□ 0.58
COMMD3-206ENST00000468179 DPP8Q6V1X1 898 aaPredicted RBP18.65■□□□□ 0.58
COMMD3-206ENST00000468179 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
COMMD3-206ENST00000468179 MPNDQ8N594 471 aa18.65■□□□□ 0.58
COMMD3-206ENST00000468179 IQCA1LA6NCM1 817 aa18.64■□□□□ 0.57
COMMD3-206ENST00000468179 EIF6P56537 245 aaKnown RBP18.64■□□□□ 0.57
COMMD3-206ENST00000468179 CCDC152Q4G0S7 254 aa18.64■□□□□ 0.57
COMMD3-206ENST00000468179 G2E3Q7L622 706 aa18.64■□□□□ 0.57
COMMD3-206ENST00000468179 SMC1BQ8NDV3 1235 aa18.64■□□□□ 0.57
COMMD3-206ENST00000468179 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
COMMD3-206ENST00000468179 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
COMMD3-206ENST00000468179 CDHR2Q9BYE9 1310 aa18.63■□□□□ 0.57
COMMD3-206ENST00000468179 FZD9O00144 591 aa18.63■□□□□ 0.57
COMMD3-206ENST00000468179 DDNO94850 711 aaPredicted RBP18.63■□□□□ 0.57
COMMD3-206ENST00000468179 DNAAF4Q8WXU2 420 aa18.63■□□□□ 0.57
COMMD3-206ENST00000468179 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
COMMD3-206ENST00000468179 NEURL1BA8MQ27 555 aa18.62■□□□□ 0.57
COMMD3-206ENST00000468179 PPIP5K2O43314 1243 aa18.62■□□□□ 0.57
COMMD3-206ENST00000468179 IGKV5-2P06315 115 aa18.62■□□□□ 0.57
COMMD3-206ENST00000468179 RPS8P62241 208 aaKnown RBP18.62■□□□□ 0.57
COMMD3-206ENST00000468179 NIM1KQ8IY84 436 aa18.62■□□□□ 0.57
COMMD3-206ENST00000468179 DICER1Q9UPY3 1922 aaKnown RBP18.62■□□□□ 0.57
COMMD3-206ENST00000468179 CCDC88AQ3V6T2 1871 aa18.62■□□□□ 0.57
COMMD3-206ENST00000468179 GPC2Q8N158 579 aa18.61■□□□□ 0.57
COMMD3-206ENST00000468179 LINS1Q8NG48 757 aa18.61■□□□□ 0.57
COMMD3-206ENST00000468179 L3MBTL3Q96JM7 780 aaPredicted RBP18.61■□□□□ 0.57
COMMD3-206ENST00000468179 APLP1P51693 650 aa18.6■□□□□ 0.57
COMMD3-206ENST00000468179 GCKRQ14397 625 aa18.59■□□□□ 0.57
COMMD3-206ENST00000468179 CWF19L2Q2TBE0 894 aaKnown RBP18.59■□□□□ 0.57
COMMD3-206ENST00000468179 CELF1Q92879 486 aaKnown RBP18.59■□□□□ 0.57
COMMD3-206ENST00000468179 WDR90Q96KV7 1748 aa18.58■□□□□ 0.57
COMMD3-206ENST00000468179 POTECB2RU33 542 aa18.58■□□□□ 0.57
COMMD3-206ENST00000468179 H7C1W4 665 aa18.58■□□□□ 0.57
COMMD3-206ENST00000468179 SLFN5Q08AF3 891 aa18.58■□□□□ 0.57
COMMD3-206ENST00000468179 AOC3Q16853 763 aa18.58■□□□□ 0.57
COMMD3-206ENST00000468179 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.57
COMMD3-206ENST00000468179 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.57
COMMD3-206ENST00000468179 NSFL1CQ9UNZ2 370 aaKnown RBP18.58■□□□□ 0.57
COMMD3-206ENST00000468179 ZNF541Q9H0D2 1346 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 CTSWP56202 376 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 KIAA2012Q0VF49 1180 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 ANKRD18AQ8IVF6 992 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 JARID2Q92833 1246 aaPredicted RBP18.57■□□□□ 0.56
COMMD3-206ENST00000468179 EYA3Q99504 573 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 HACL1Q9UJ83 578 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 ZNRF3Q9ULT6 936 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
COMMD3-206ENST00000468179 LAMB2P55268 1798 aa18.57■□□□□ 0.56
COMMD3-206ENST00000468179 UBE3BQ7Z3V4 1068 aa18.56■□□□□ 0.56
COMMD3-206ENST00000468179 GJA3Q9Y6H8 435 aa18.56■□□□□ 0.56
COMMD3-206ENST00000468179 CACNA1FO60840 1977 aa18.56■□□□□ 0.56
COMMD3-206ENST00000468179 C6orf229H3BNL8 230 aa18.55■□□□□ 0.56
COMMD3-206ENST00000468179 LMOD1P29536 600 aaPredicted RBP18.55■□□□□ 0.56
COMMD3-206ENST00000468179 WASHC4Q2M389 1173 aa18.55■□□□□ 0.56
COMMD3-206ENST00000468179 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
COMMD3-206ENST00000468179 PLA2G12BQ9BX93 195 aa18.55■□□□□ 0.56
COMMD3-206ENST00000468179 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
COMMD3-206ENST00000468179 TTLL11Q8NHH1 800 aa18.54■□□□□ 0.56
COMMD3-206ENST00000468179 TAF1DQ9H5J8 278 aaPredicted RBP18.54■□□□□ 0.56
COMMD3-206ENST00000468179 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
COMMD3-206ENST00000468179 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
COMMD3-206ENST00000468179 EPHX2P34913 555 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 GPSM2P81274 684 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 TNIP1Q15025 636 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 BEND3Q5T5X7 828 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 CHADLQ6NUI6 762 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 SLC51AQ86UW1 340 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 LDHDQ86WU2 507 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 CCDC85AQ96PX6 553 aaPredicted RBP18.53■□□□□ 0.56
COMMD3-206ENST00000468179 PODXL2Q9NZ53 605 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 RTL9Q8NET4 1388 aa18.53■□□□□ 0.56
COMMD3-206ENST00000468179 F6X3S4 739 aa18.52■□□□□ 0.56
COMMD3-206ENST00000468179 ALDH1L1O75891 902 aa18.52■□□□□ 0.56
COMMD3-206ENST00000468179 IGHMBP2P38935 993 aaKnown RBP18.51■□□□□ 0.55
COMMD3-206ENST00000468179 ALDH1L2Q3SY69 923 aa18.51■□□□□ 0.55
COMMD3-206ENST00000468179 CIAPIN1Q6FI81 312 aa18.51■□□□□ 0.55
COMMD3-206ENST00000468179 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
COMMD3-206ENST00000468179 ZC3H12CQ9C0D7 883 aaKnown RBP18.51■□□□□ 0.55
COMMD3-206ENST00000468179 SRCIN1Q9C0H9 1055 aa18.51■□□□□ 0.55
COMMD3-206ENST00000468179 BSDC1Q9NW68 430 aaPredicted RBP18.51■□□□□ 0.55
COMMD3-206ENST00000468179 GGA1Q9UJY5 639 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms