RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 HCLS1P14317 486 aaPredicted RBP25.24■■□□□ 1.63
TMEM53-207ENST00000468117 CCDC8Q9H0W5 538 aaPredicted RBP25.24■■□□□ 1.63
TMEM53-207ENST00000468117 GREM2Q9H772 168 aa25.24■■□□□ 1.63
TMEM53-207ENST00000468117 LAMB2P55268 1798 aa25.24■■□□□ 1.63
TMEM53-207ENST00000468117 IFIT5Q13325 482 aaKnown RBP25.24■■□□□ 1.63
TMEM53-207ENST00000468117 LRRC24Q50LG9 513 aa25.24■■□□□ 1.63
TMEM53-207ENST00000468117 TBC1D9BQ66K14 1250 aa25.24■■□□□ 1.63
TMEM53-207ENST00000468117 BICDL1Q6ZP65 573 aa25.24■■□□□ 1.63
TMEM53-207ENST00000468117 TRAPPC3LQ5T215 181 aa25.23■■□□□ 1.63
TMEM53-207ENST00000468117 PROM2Q8N271 834 aa25.23■■□□□ 1.63
TMEM53-207ENST00000468117 UPF2Q9HAU5 1272 aaKnown RBP25.23■■□□□ 1.63
TMEM53-207ENST00000468117 USP42Q9H9J4 1324 aaKnown RBP25.23■■□□□ 1.63
TMEM53-207ENST00000468117 EYA2O00167 538 aa25.22■■□□□ 1.63
TMEM53-207ENST00000468117 RGL2O15211 777 aa25.22■■□□□ 1.63
TMEM53-207ENST00000468117 TXNRD1Q16881 649 aa25.22■■□□□ 1.63
TMEM53-207ENST00000468117 PUS3Q9BZE2 481 aaKnown RBP25.22■■□□□ 1.63
TMEM53-207ENST00000468117 TLR7Q9NYK1 1049 aaKnown RBP25.22■■□□□ 1.63
TMEM53-207ENST00000468117 TTC41PQ6P2S7 1318 aa25.22■■□□□ 1.63
TMEM53-207ENST00000468117 TRIM6-TRIM34B2RNG4 842 aa25.22■■□□□ 1.63
TMEM53-207ENST00000468117 ITGA6P23229 1130 aa25.22■■□□□ 1.63
TMEM53-207ENST00000468117 RFC4P35249 363 aa25.21■■□□□ 1.63
TMEM53-207ENST00000468117 IL15P40933 162 aaPredicted RBP25.21■■□□□ 1.63
TMEM53-207ENST00000468117 TNNI3KQ59H18 835 aa25.21■■□□□ 1.63
TMEM53-207ENST00000468117 ECHDC1Q9NTX5 307 aa25.21■■□□□ 1.63
TMEM53-207ENST00000468117 FPGT-TNNI3KV9GXZ4 949 aa25.21■■□□□ 1.63
TMEM53-207ENST00000468117 APBA3O96018 575 aa25.2■■□□□ 1.63
TMEM53-207ENST00000468117 TAF7LQ5H9L4 462 aa25.2■■□□□ 1.63
TMEM53-207ENST00000468117 RILPL2Q969X0 211 aa25.2■■□□□ 1.63
TMEM53-207ENST00000468117 CASZ1Q86V15 1759 aa25.2■■□□□ 1.62
TMEM53-207ENST00000468117 CIAO1O76071 339 aa25.2■■□□□ 1.62
TMEM53-207ENST00000468117 GPATCH3Q96I76 525 aa25.2■■□□□ 1.62
TMEM53-207ENST00000468117 MAP4K4O95819 1239 aaPredicted RBP25.19■■□□□ 1.62
TMEM53-207ENST00000468117 COL24A1Q17RW2 1714 aa25.19■■□□□ 1.62
TMEM53-207ENST00000468117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.19■■□□□ 1.62
TMEM53-207ENST00000468117 TNS1Q9HBL0 1735 aaKnown RBP25.18■■□□□ 1.62
TMEM53-207ENST00000468117 ANKRD18BA2A2Z9 1011 aa25.18■■□□□ 1.62
TMEM53-207ENST00000468117 ERC2O15083 957 aa25.18■■□□□ 1.62
TMEM53-207ENST00000468117 PLSCR1O15162 318 aa25.18■■□□□ 1.62
TMEM53-207ENST00000468117 GLRX3O76003 335 aaKnown RBP25.18■■□□□ 1.62
TMEM53-207ENST00000468117 SETDB2Q96T68 719 aa25.17■■□□□ 1.62
TMEM53-207ENST00000468117 ADRA2BP18089 450 aa25.17■■□□□ 1.62
TMEM53-207ENST00000468117 ERFEQ4G0M1 354 aa25.17■■□□□ 1.62
TMEM53-207ENST00000468117 TBC1D32Q96NH3 1257 aa25.17■■□□□ 1.62
TMEM53-207ENST00000468117 DBNLQ9UJU6 430 aaKnown RBP25.17■■□□□ 1.62
TMEM53-207ENST00000468117 FBXO3Q9UK99 471 aa25.17■■□□□ 1.62
TMEM53-207ENST00000468117 CASC1Q6TDU7 716 aa25.15■■□□□ 1.62
TMEM53-207ENST00000468117 HSP90B1P14625 803 aaKnown RBP25.15■■□□□ 1.62
TMEM53-207ENST00000468117 LDHAL6AQ6ZMR3 332 aa25.15■■□□□ 1.62
TMEM53-207ENST00000468117 SPEF2Q9C093 1822 aa25.14■■□□□ 1.62
TMEM53-207ENST00000468117 C22orf23Q9BZE7 217 aa25.14■■□□□ 1.62
TMEM53-207ENST00000468117 GTF2E1P29083 439 aaPredicted RBP25.13■■□□□ 1.61
TMEM53-207ENST00000468117 DBNDD2Q9BQY9 259 aa25.13■■□□□ 1.61
TMEM53-207ENST00000468117 CEP126Q9P2H0 1117 aa25.13■■□□□ 1.61
TMEM53-207ENST00000468117 GPR108Q9NPR9 543 aa25.13■■□□□ 1.61
TMEM53-207ENST00000468117 SSFA2P28290 1259 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 TIMM10P62072 90 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 CCDC152Q4G0S7 254 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 NBPF5PQ86XG9 351 aaPredicted RBP25.12■■□□□ 1.61
TMEM53-207ENST00000468117 NEUROD6Q96NK8 337 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 RIPOR2Q9Y4F9 1068 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 CNTROBQ8N137 903 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 IPO9Q96P70 1041 aaKnown RBP25.12■■□□□ 1.61
TMEM53-207ENST00000468117 NYXQ9GZU5 481 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 SEC31BQ9NQW1 1179 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 CNNM1Q9NRU3 951 aa25.12■■□□□ 1.61
TMEM53-207ENST00000468117 ZNF609O15014 1411 aa25.11■■□□□ 1.61
TMEM53-207ENST00000468117 TAF1P21675 1872 aa25.11■■□□□ 1.61
TMEM53-207ENST00000468117 ABCC12Q96J65 1359 aa25.11■■□□□ 1.61
TMEM53-207ENST00000468117 RIC1Q4ADV7 1423 aa25.11■■□□□ 1.61
TMEM53-207ENST00000468117 BOLA2Q9H3K6 86 aa25.1■■□□□ 1.61
TMEM53-207ENST00000468117 LRP5O75197 1615 aa25.1■■□□□ 1.61
TMEM53-207ENST00000468117 A0A1B0GUL7 405 aa25.1■■□□□ 1.61
TMEM53-207ENST00000468117 CHMLP26374 656 aa25.1■■□□□ 1.61
TMEM53-207ENST00000468117 C3orf67Q6ZVT6 689 aa25.1■■□□□ 1.61
TMEM53-207ENST00000468117 HMGB2P26583 209 aaKnown RBP25.08■■□□□ 1.61
TMEM53-207ENST00000468117 NFIXQ14938 502 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 ZNF827Q17R98 1081 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 METTL24Q5JXM2 366 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 TPTE2Q6XPS3 522 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 RTL9Q8NET4 1388 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 RGPD3A6NKT7 1758 aaPredicted RBP25.08■■□□□ 1.61
TMEM53-207ENST00000468117 RGPD4Q7Z3J3 1758 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 GYS1P13807 737 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 SLC10A5Q5PT55 438 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 CCDC24Q8N4L8 307 aa25.08■■□□□ 1.61
TMEM53-207ENST00000468117 ATP5JP18859 108 aa25.07■■□□□ 1.6
TMEM53-207ENST00000468117 TFCP2L1Q9NZI6 479 aa25.07■■□□□ 1.6
TMEM53-207ENST00000468117 COL4A1P02462 1669 aa25.07■■□□□ 1.6
TMEM53-207ENST00000468117 CARMIL3Q8ND23 1372 aa25.07■■□□□ 1.6
TMEM53-207ENST00000468117 AKAP2Q9Y2D5 859 aa25.07■■□□□ 1.6
TMEM53-207ENST00000468117 EIF5BO60841 1220 aaKnown RBP25.05■■□□□ 1.6
TMEM53-207ENST00000468117 SF3B3Q15393 1217 aaKnown RBP25.05■■□□□ 1.6
TMEM53-207ENST00000468117 AKT1S1Q96B36 256 aa25.05■■□□□ 1.6
TMEM53-207ENST00000468117 EVI5LQ96CN4 794 aa25.05■■□□□ 1.6
TMEM53-207ENST00000468117 MPHOSPH8Q99549 860 aa25.05■■□□□ 1.6
TMEM53-207ENST00000468117 ESYT1Q9BSJ8 1104 aa25.05■■□□□ 1.6
TMEM53-207ENST00000468117 RBM25P49756 843 aaKnown RBP25.05■■□□□ 1.6
TMEM53-207ENST00000468117 VGLL2Q8N8G2 317 aa25.05■■□□□ 1.6
TMEM53-207ENST00000468117 NPHP1O15259 732 aa25.04■■□□□ 1.6
TMEM53-207ENST00000468117 DDRGK1Q96HY6 314 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms