RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 RWDD1Q9H446 243 aaPredicted RBP10.8□□□□□ -0.68
LCA5-203ENST00000467898 IMPDH2P12268 514 aa10.8□□□□□ -0.68
LCA5-203ENST00000467898 CHMLP26374 656 aa10.8□□□□□ -0.68
LCA5-203ENST00000467898 NAA30Q147X3 362 aaPredicted RBP10.8□□□□□ -0.68
LCA5-203ENST00000467898 HDGFL1Q5TGJ6 251 aa10.8□□□□□ -0.68
LCA5-203ENST00000467898 TMCO3Q6UWJ1 677 aa10.8□□□□□ -0.68
LCA5-203ENST00000467898 RPUSD2Q8IZ73 545 aaKnown RBP10.8□□□□□ -0.68
LCA5-203ENST00000467898 DDX11Q96FC9 970 aa10.8□□□□□ -0.68
LCA5-203ENST00000467898 CFAP53Q96M91 514 aa10.8□□□□□ -0.68
LCA5-203ENST00000467898 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
LCA5-203ENST00000467898 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
LCA5-203ENST00000467898 SNUPNO95149 360 aaKnown RBP10.79□□□□□ -0.68
LCA5-203ENST00000467898 FILIP1Q7Z7B0 1213 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 CLIP2Q9UDT6 1046 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 MCM8Q9UJA3 840 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 CLCN6P51797 869 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 PDIA5Q14554 519 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 TCP11L2Q8N4U5 519 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 RTF1Q92541 710 aaKnown RBP10.79□□□□□ -0.68
LCA5-203ENST00000467898 C16orf45Q96MC5 204 aaPredicted RBP10.79□□□□□ -0.68
LCA5-203ENST00000467898 PLEKHF1Q96S99 279 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 DIP2AQ14689 1571 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 XRN1Q8IZH2 1706 aaKnown RBP10.79□□□□□ -0.68
LCA5-203ENST00000467898 FAM163BP0C2L3 166 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
LCA5-203ENST00000467898 PRR36Q9H6K5 1346 aa10.78□□□□□ -0.68
LCA5-203ENST00000467898 U2SURPO15042 1029 aaKnown RBP10.78□□□□□ -0.68
LCA5-203ENST00000467898 BAG1Q99933 345 aaPredicted RBP10.78□□□□□ -0.68
LCA5-203ENST00000467898 OAS2P29728 719 aaKnown RBP10.78□□□□□ -0.68
LCA5-203ENST00000467898 RDXP35241 583 aaKnown RBP10.78□□□□□ -0.68
LCA5-203ENST00000467898 RBM12BQ8IXT5 1001 aaKnown RBP10.78□□□□□ -0.68
LCA5-203ENST00000467898 PES1O00541 588 aaKnown RBP10.77□□□□□ -0.69
LCA5-203ENST00000467898 POLR3GO15318 223 aaPredicted RBP10.77□□□□□ -0.69
LCA5-203ENST00000467898 CDKL5O76039 1030 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 NF2P35240 595 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 ANKRD18AQ8IVF6 992 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 ERBB3P21860 1342 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 RIMS1Q86UR5 1692 aaKnown RBP10.77□□□□□ -0.69
LCA5-203ENST00000467898 GOLGA6CA6NDK9 693 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 GOLGA6BA6NDN3 693 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 TUBB4AP04350 444 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 GOLGA6DP0CG33 693 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 SKILP12757 684 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 PECAM1P16284 738 aaPredicted RBP10.77□□□□□ -0.69
LCA5-203ENST00000467898 TBC1D25Q3MII6 688 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 NCAPG2Q86XI2 1143 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 NUDT16Q96DE0 195 aaKnown RBP10.77□□□□□ -0.69
LCA5-203ENST00000467898 CRACR2AQ9BSW2 395 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 GOLGA6AQ9NYA3 693 aa10.77□□□□□ -0.69
LCA5-203ENST00000467898 A0A1B0GUA9 196 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 GPTP24298 496 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 HNRNPH1P31943 449 aaKnown RBP10.76□□□□□ -0.69
LCA5-203ENST00000467898 LMAN1P49257 510 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 ANKRD45Q5TZF3 282 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 TCP11Q8WWU5 503 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 MAF1Q9H063 256 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 ADAM21Q9UKJ8 722 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 RRP7AQ9Y3A4 280 aaKnown RBP10.76□□□□□ -0.69
LCA5-203ENST00000467898 AATKQ6ZMQ8 1374 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 NALCNQ8IZF0 1738 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 CEP170BQ9Y4F5 1589 aaPredicted RBP10.76□□□□□ -0.69
LCA5-203ENST00000467898 RTN2O75298 545 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 ERLIN2O94905 339 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 WDR63Q8IWG1 891 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
LCA5-203ENST00000467898 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 KCND1Q9NSA2 647 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 ZNF232Q9UNY5 417 aa10.76□□□□□ -0.69
LCA5-203ENST00000467898 ZNF142P52746 1687 aaPredicted RBP10.76□□□□□ -0.69
LCA5-203ENST00000467898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 THUMPD2Q9BTF0 503 aaKnown RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 KDRP35968 1356 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 PTCH1Q13635 1447 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 PSMD2Q13200 908 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 KCNB2Q92953 911 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 THOC1Q96FV9 657 aaKnown RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 HOMER3Q9NSC5 361 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 U2AF1L5P0DN76 240 aaPredicted RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 U2AF1Q01081 240 aaKnown RBP eCLIP10.75□□□□□ -0.69
LCA5-203ENST00000467898 MCM6Q14566 821 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 SMC1AQ14683 1233 aaKnown RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 TPD52L1Q16890 204 aaPredicted RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 MICALL1Q8N3F8 863 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 ZNF396Q96N95 335 aaPredicted RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 SRRTQ9BXP5 876 aaKnown RBP10.75□□□□□ -0.69
LCA5-203ENST00000467898 EXOC6BQ9Y2D4 811 aa10.75□□□□□ -0.69
LCA5-203ENST00000467898 ADAMTSL3P82987 1691 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 CDK12Q9NYV4 1490 aaPredicted RBP10.74□□□□□ -0.69
LCA5-203ENST00000467898 NEMFO60524 1076 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 BCAR3O75815 825 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 POTEDQ86YR6 584 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 PDRG1Q9NUG6 133 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms