RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 BICC1Q9H694 974 aaKnown RBP21.4■■□□□ 1.02
VARS2-204ENST00000467717 ZBTB40Q9NUA8 1239 aa21.4■■□□□ 1.02
VARS2-204ENST00000467717 SRGNP10124 158 aa21.39■■□□□ 1.01
VARS2-204ENST00000467717 RABL6Q3YEC7 729 aaPredicted RBP21.39■■□□□ 1.01
VARS2-204ENST00000467717 NPR1P16066 1061 aa21.38■■□□□ 1.01
VARS2-204ENST00000467717 CHRNA5P30532 468 aa21.38■■□□□ 1.01
VARS2-204ENST00000467717 LMBR1LQ6UX01 489 aa21.38■■□□□ 1.01
VARS2-204ENST00000467717 ANKRD44Q8N8A2 993 aa21.38■■□□□ 1.01
VARS2-204ENST00000467717 RPGRQ92834 1020 aaKnown RBP21.38■■□□□ 1.01
VARS2-204ENST00000467717 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
VARS2-204ENST00000467717 AFDNP55196 1824 aaKnown RBP21.37■■□□□ 1.01
VARS2-204ENST00000467717 DPEP1P16444 411 aa21.37■■□□□ 1.01
VARS2-204ENST00000467717 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
VARS2-204ENST00000467717 RBM17Q96I25 401 aaKnown RBP21.37■■□□□ 1.01
VARS2-204ENST00000467717 CCDC85AQ96PX6 553 aaPredicted RBP21.37■■□□□ 1.01
VARS2-204ENST00000467717 C1orf115Q9H7X2 142 aa21.37■■□□□ 1.01
VARS2-204ENST00000467717 N4BP2Q86UW6 1770 aaPredicted RBP21.37■■□□□ 1.01
VARS2-204ENST00000467717 A0A0G2JLW4 131 aa21.36■■□□□ 1.01
VARS2-204ENST00000467717 IRX6P78412 446 aaPredicted RBP21.36■■□□□ 1.01
VARS2-204ENST00000467717 STYK1Q6J9G0 422 aa21.36■■□□□ 1.01
VARS2-204ENST00000467717 DDX46Q7L014 1031 aaKnown RBP21.36■■□□□ 1.01
VARS2-204ENST00000467717 GREM2Q9H772 168 aa21.36■■□□□ 1.01
VARS2-204ENST00000467717 CHMP3Q9Y3E7 222 aa21.36■■□□□ 1.01
VARS2-204ENST00000467717 AAMPQ13685 434 aa21.35■■□□□ 1.01
VARS2-204ENST00000467717 FAM161AQ3B820 660 aa21.35■■□□□ 1.01
VARS2-204ENST00000467717 NLGN2Q8NFZ4 835 aa21.35■■□□□ 1.01
VARS2-204ENST00000467717 ZNF622Q969S3 477 aaKnown RBP eCLIP21.35■■□□□ 1.01
VARS2-204ENST00000467717 CRAMP1Q96RY5 1269 aa21.35■■□□□ 1.01
VARS2-204ENST00000467717 RTL9Q8NET4 1388 aa21.35■■□□□ 1.01
VARS2-204ENST00000467717 ALDH1B1P30837 517 aa21.34■■□□□ 1.01
VARS2-204ENST00000467717 IFIT5Q13325 482 aaKnown RBP21.34■■□□□ 1.01
VARS2-204ENST00000467717 MTX1Q13505 466 aa21.34■■□□□ 1.01
VARS2-204ENST00000467717 EXOC6Q8TAG9 804 aa21.34■■□□□ 1.01
VARS2-204ENST00000467717 CEP350Q5VT06 3117 aa21.34■■□□□ 1.01
VARS2-204ENST00000467717 KCNA3P22001 575 aa21.33■■□□□ 1.01
VARS2-204ENST00000467717 ITGA6P23229 1130 aa21.33■■□□□ 1.01
VARS2-204ENST00000467717 CCDC57Q2TAC2 916 aa21.33■■□□□ 1.01
VARS2-204ENST00000467717 CNKSR1Q969H4 720 aa21.33■■□□□ 1.01
VARS2-204ENST00000467717 SEC31BQ9NQW1 1179 aa21.33■■□□□ 1.01
VARS2-204ENST00000467717 PIM2Q9P1W9 311 aa21.33■■□□□ 1.01
VARS2-204ENST00000467717 ANKRD18BA2A2Z9 1011 aa21.32■■□□□ 1
VARS2-204ENST00000467717 NEFLP07196 543 aa21.32■■□□□ 1
VARS2-204ENST00000467717 GRAPQ13588 217 aa21.32■■□□□ 1
VARS2-204ENST00000467717 GRAPLQ8TC17 118 aaPredicted RBP21.32■■□□□ 1
VARS2-204ENST00000467717 CDC5LQ99459 802 aaKnown RBP21.32■■□□□ 1
VARS2-204ENST00000467717 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
VARS2-204ENST00000467717 SRGAP3O43295 1099 aa21.31■■□□□ 1
VARS2-204ENST00000467717 ATP8B2P98198 1209 aa21.31■■□□□ 1
VARS2-204ENST00000467717 CEP85Q6P2H3 762 aa21.31■■□□□ 1
VARS2-204ENST00000467717 RPAP2Q8IXW5 612 aaPredicted RBP21.31■■□□□ 1
VARS2-204ENST00000467717 TTLL6Q8N841 843 aa21.31■■□□□ 1
VARS2-204ENST00000467717 BBOX1O75936 387 aa21.3■■□□□ 1
VARS2-204ENST00000467717 CELF1Q92879 486 aaKnown RBP21.3■■□□□ 1
VARS2-204ENST00000467717 DDX60Q8IY21 1712 aaKnown RBP21.29■■□□□ 1
VARS2-204ENST00000467717 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
VARS2-204ENST00000467717 DALRD3Q5D0E6 543 aaKnown RBP21.29■■□□□ 1
VARS2-204ENST00000467717 ANKRD18AQ8IVF6 992 aa21.29■■□□□ 1
VARS2-204ENST00000467717 ANKRD31Q8N7Z5 1873 aa21.28■■□□□ 1
VARS2-204ENST00000467717 KIF13BQ9NQT8 1826 aa21.28■■□□□ 1
VARS2-204ENST00000467717 PNMA6EA0A0J9YXQ4 647 aa21.28■■□□□ 1
VARS2-204ENST00000467717 IGHMBP2P38935 993 aaKnown RBP21.28■■□□□ 1
VARS2-204ENST00000467717 TAF7LQ5H9L4 462 aa21.28■■□□□ 1
VARS2-204ENST00000467717 PRPF40BQ6NWY9 871 aaKnown RBP21.28■■□□□ 1
VARS2-204ENST00000467717 RFX5P48382 616 aaPredicted RBP21.27■■□□□ 1
VARS2-204ENST00000467717 TMC4Q7Z404 712 aa21.27■■□□□ 1
VARS2-204ENST00000467717 SSH3Q8TE77 659 aa21.27■■□□□ 1
VARS2-204ENST00000467717 LAMB2P55268 1798 aa21.27■■□□□ 1
VARS2-204ENST00000467717 GOLGB1Q14789 3259 aaKnown RBP21.26■□□□□ 0.99
VARS2-204ENST00000467717 PPEF1O14829 653 aaPredicted RBP21.26■□□□□ 0.99
VARS2-204ENST00000467717 HMMRO75330 724 aa21.26■□□□□ 0.99
VARS2-204ENST00000467717 POLA2Q14181 598 aa21.26■□□□□ 0.99
VARS2-204ENST00000467717 MPHOSPH8Q99549 860 aa21.26■□□□□ 0.99
VARS2-204ENST00000467717 PCDHB15Q9Y5E8 787 aa21.26■□□□□ 0.99
VARS2-204ENST00000467717 PTPN12Q05209 780 aaKnown RBP21.25■□□□□ 0.99
VARS2-204ENST00000467717 GPR162Q16538 588 aa21.25■□□□□ 0.99
VARS2-204ENST00000467717 SIRT2Q8IXJ6 389 aa21.25■□□□□ 0.99
VARS2-204ENST00000467717 ZNF594Q96JF6 807 aaPredicted RBP21.25■□□□□ 0.99
VARS2-204ENST00000467717 COPRSQ9NQ92 184 aa21.25■□□□□ 0.99
VARS2-204ENST00000467717 BSDC1Q9NW68 430 aaPredicted RBP21.25■□□□□ 0.99
VARS2-204ENST00000467717 WWC3Q9ULE0 1092 aa21.25■□□□□ 0.99
VARS2-204ENST00000467717 LDHAL6AQ6ZMR3 332 aa21.24■□□□□ 0.99
VARS2-204ENST00000467717 KLHDC4Q8TBB5 520 aa21.24■□□□□ 0.99
VARS2-204ENST00000467717 TMX4Q9H1E5 349 aaPredicted RBP21.24■□□□□ 0.99
VARS2-204ENST00000467717 BCS1LQ9Y276 419 aa21.24■□□□□ 0.99
VARS2-204ENST00000467717 ATP6V0A2Q9Y487 856 aa21.24■□□□□ 0.99
VARS2-204ENST00000467717 SP8Q8IXZ3 490 aa21.23■□□□□ 0.99
VARS2-204ENST00000467717 C7orf43Q8WVR3 580 aa21.23■□□□□ 0.99
VARS2-204ENST00000467717 COL11A2P13942 1736 aaPredicted RBP21.22■□□□□ 0.99
VARS2-204ENST00000467717 CNNM1Q9NRU3 951 aa21.22■□□□□ 0.99
VARS2-204ENST00000467717 FBXO3Q9UK99 471 aa21.22■□□□□ 0.99
VARS2-204ENST00000467717 PA2G4Q9UQ80 394 aaKnown RBP21.22■□□□□ 0.99
VARS2-204ENST00000467717 EYA2O00167 538 aa21.21■□□□□ 0.99
VARS2-204ENST00000467717 SOGA3Q5TF21 947 aa21.21■□□□□ 0.99
VARS2-204ENST00000467717 CC2D2BQ6DHV5 1058 aa21.21■□□□□ 0.99
VARS2-204ENST00000467717 KIAA1551Q9HCM1 1747 aa21.21■□□□□ 0.99
VARS2-204ENST00000467717 C21orf2O43822 256 aa21.2■□□□□ 0.98
VARS2-204ENST00000467717 CIAO1O76071 339 aa21.2■□□□□ 0.98
VARS2-204ENST00000467717 PUS3Q9BZE2 481 aaKnown RBP21.2■□□□□ 0.98
VARS2-204ENST00000467717 SIL1Q9H173 461 aa21.2■□□□□ 0.98
VARS2-204ENST00000467717 ZNF219Q9P2Y4 722 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms