RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ATP6V0A2Q9Y487 856 aa17.21■□□□□ 0.35
SSBP1-206ENST00000467681 UTYO14607 1347 aa17.21■□□□□ 0.34
SSBP1-206ENST00000467681 NFKBIEO00221 500 aa17.2■□□□□ 0.34
SSBP1-206ENST00000467681 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-206ENST00000467681 GRIPAP1Q4V328 841 aa17.2■□□□□ 0.34
SSBP1-206ENST00000467681 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
SSBP1-206ENST00000467681 ATF7IPQ6VMQ6 1270 aa17.2■□□□□ 0.34
SSBP1-206ENST00000467681 FRAT1Q92837 279 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-206ENST00000467681 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
SSBP1-206ENST00000467681 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
SSBP1-206ENST00000467681 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
SSBP1-206ENST00000467681 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
SSBP1-206ENST00000467681 TRIM27P14373 513 aa17.19■□□□□ 0.34
SSBP1-206ENST00000467681 YY1P25490 414 aa17.19■□□□□ 0.34
SSBP1-206ENST00000467681 FOXO4P98177 505 aa17.19■□□□□ 0.34
SSBP1-206ENST00000467681 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
SSBP1-206ENST00000467681 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
SSBP1-206ENST00000467681 CCDC85AQ96PX6 553 aaPredicted RBP17.19■□□□□ 0.34
SSBP1-206ENST00000467681 DLEC1Q9Y238 1755 aa17.19■□□□□ 0.34
SSBP1-206ENST00000467681 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
SSBP1-206ENST00000467681 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-206ENST00000467681 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
SSBP1-206ENST00000467681 INTS3Q68E01 1043 aaKnown RBP17.18■□□□□ 0.34
SSBP1-206ENST00000467681 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-206ENST00000467681 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
SSBP1-206ENST00000467681 LTBP3Q9NS15 1303 aa17.18■□□□□ 0.34
SSBP1-206ENST00000467681 LMNB1P20700 586 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 PRELPP51888 382 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 RASSF7Q02833 373 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 GREM2Q9H772 168 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
SSBP1-206ENST00000467681 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSBP1-206ENST00000467681 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
SSBP1-206ENST00000467681 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
SSBP1-206ENST00000467681 RTL9Q8NET4 1388 aa17.15■□□□□ 0.34
SSBP1-206ENST00000467681 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
SSBP1-206ENST00000467681 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
SSBP1-206ENST00000467681 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
SSBP1-206ENST00000467681 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
SSBP1-206ENST00000467681 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
SSBP1-206ENST00000467681 PSMD1Q99460 953 aa17.15■□□□□ 0.34
SSBP1-206ENST00000467681 CHD4Q14839 1912 aa17.15■□□□□ 0.34
SSBP1-206ENST00000467681 MPNDQ8N594 471 aa17.14■□□□□ 0.33
SSBP1-206ENST00000467681 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
SSBP1-206ENST00000467681 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
SSBP1-206ENST00000467681 ITGA6P23229 1130 aa17.13■□□□□ 0.33
SSBP1-206ENST00000467681 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
SSBP1-206ENST00000467681 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-206ENST00000467681 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-206ENST00000467681 BSDC1Q9NW68 430 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-206ENST00000467681 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
SSBP1-206ENST00000467681 ANKRD18BA2A2Z9 1011 aa17.12■□□□□ 0.33
SSBP1-206ENST00000467681 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
SSBP1-206ENST00000467681 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-206ENST00000467681 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-206ENST00000467681 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
SSBP1-206ENST00000467681 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
SSBP1-206ENST00000467681 LAMB2P55268 1798 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
SSBP1-206ENST00000467681 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
SSBP1-206ENST00000467681 GPSM2P81274 684 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 CCDC57Q2TAC2 916 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 TMEM57Q8N5G2 664 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 VPS33BQ9H267 617 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SSBP1-206ENST00000467681 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
SSBP1-206ENST00000467681 CHMP3Q9Y3E7 222 aa17.11■□□□□ 0.33
SSBP1-206ENST00000467681 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
SSBP1-206ENST00000467681 TAF1P21675 1872 aa17.1■□□□□ 0.33
SSBP1-206ENST00000467681 RLBP1P12271 317 aa17.1■□□□□ 0.33
SSBP1-206ENST00000467681 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
SSBP1-206ENST00000467681 MEIS3Q99687 375 aa17.1■□□□□ 0.33
SSBP1-206ENST00000467681 MINPP1Q9UNW1 487 aa17.1■□□□□ 0.33
SSBP1-206ENST00000467681 UTRNP46939 3433 aa17.1■□□□□ 0.33
SSBP1-206ENST00000467681 GNAI3P08754 354 aa17.09■□□□□ 0.33
SSBP1-206ENST00000467681 MS4A1P11836 297 aa17.09■□□□□ 0.33
SSBP1-206ENST00000467681 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SSBP1-206ENST00000467681 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
SSBP1-206ENST00000467681 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
SSBP1-206ENST00000467681 FER1L6Q2WGJ9 1857 aa17.09■□□□□ 0.33
SSBP1-206ENST00000467681 SBF1O95248 1867 aa17.08■□□□□ 0.33
SSBP1-206ENST00000467681 ZNF784Q8NCA9 323 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-206ENST00000467681 POLLQ9UGP5 575 aa17.08■□□□□ 0.32
SSBP1-206ENST00000467681 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
SSBP1-206ENST00000467681 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
SSBP1-206ENST00000467681 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
SSBP1-206ENST00000467681 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-206ENST00000467681 ANKIB1Q9P2G1 1089 aa17.07■□□□□ 0.32
SSBP1-206ENST00000467681 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
SSBP1-206ENST00000467681 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
SSBP1-206ENST00000467681 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
SSBP1-206ENST00000467681 PLIN1O60240 522 aa17.06■□□□□ 0.32
SSBP1-206ENST00000467681 TAF7LQ5H9L4 462 aa17.06■□□□□ 0.32
SSBP1-206ENST00000467681 LARGE2Q8N3Y3 721 aa17.06■□□□□ 0.32
SSBP1-206ENST00000467681 JDP2Q8WYK2 163 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms