RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 IGKV5-2P06315 115 aa23.26■■□□□ 1.31
CGREF1-208ENST00000467539 NEXNQ0ZGT2 675 aa23.25■■□□□ 1.31
CGREF1-208ENST00000467539 FLIIQ13045 1269 aa23.25■■□□□ 1.31
CGREF1-208ENST00000467539 SLC51AQ86UW1 340 aa23.25■■□□□ 1.31
CGREF1-208ENST00000467539 RTFDC1Q9BY42 306 aaPredicted RBP23.25■■□□□ 1.31
CGREF1-208ENST00000467539 MPNDQ8N594 471 aa23.24■■□□□ 1.31
CGREF1-208ENST00000467539 TIAM2Q8IVF5 1701 aa23.23■■□□□ 1.31
CGREF1-208ENST00000467539 PDE8AO60658 829 aa23.23■■□□□ 1.31
CGREF1-208ENST00000467539 SUPT20HQ8NEM7 779 aa23.23■■□□□ 1.31
CGREF1-208ENST00000467539 L3MBTL3Q96JM7 780 aaPredicted RBP23.23■■□□□ 1.31
CGREF1-208ENST00000467539 RPS8P62241 208 aaKnown RBP23.22■■□□□ 1.31
CGREF1-208ENST00000467539 DPP8Q6V1X1 898 aaPredicted RBP23.22■■□□□ 1.31
CGREF1-208ENST00000467539 LARGE2Q8N3Y3 721 aa23.22■■□□□ 1.31
CGREF1-208ENST00000467539 SMC1BQ8NDV3 1235 aa23.22■■□□□ 1.31
CGREF1-208ENST00000467539 JARID2Q92833 1246 aaPredicted RBP23.22■■□□□ 1.31
CGREF1-208ENST00000467539 CELF1Q92879 486 aaKnown RBP23.22■■□□□ 1.31
CGREF1-208ENST00000467539 WDR90Q96KV7 1748 aa23.21■■□□□ 1.31
CGREF1-208ENST00000467539 LAMB2P55268 1798 aa23.2■■□□□ 1.3
CGREF1-208ENST00000467539 CDHR2Q9BYE9 1310 aa23.2■■□□□ 1.3
CGREF1-208ENST00000467539 ZNF541Q9H0D2 1346 aa23.2■■□□□ 1.3
CGREF1-208ENST00000467539 NEURL1BA8MQ27 555 aa23.2■■□□□ 1.3
CGREF1-208ENST00000467539 APLP1P51693 650 aa23.2■■□□□ 1.3
CGREF1-208ENST00000467539 FKBP5Q13451 457 aaPredicted RBP23.2■■□□□ 1.3
CGREF1-208ENST00000467539 IQCA1LA6NCM1 817 aa23.19■■□□□ 1.3
CGREF1-208ENST00000467539 H7C1W4 665 aa23.19■■□□□ 1.3
CGREF1-208ENST00000467539 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
CGREF1-208ENST00000467539 CWF19L2Q2TBE0 894 aaKnown RBP23.19■■□□□ 1.3
CGREF1-208ENST00000467539 CCDC152Q4G0S7 254 aa23.19■■□□□ 1.3
CGREF1-208ENST00000467539 GPC2Q8N158 579 aa23.19■■□□□ 1.3
CGREF1-208ENST00000467539 DNAAF4Q8WXU2 420 aa23.19■■□□□ 1.3
CGREF1-208ENST00000467539 DDX60Q8IY21 1712 aaKnown RBP23.19■■□□□ 1.3
CGREF1-208ENST00000467539 PPIP5K2O43314 1243 aa23.18■■□□□ 1.3
CGREF1-208ENST00000467539 SEC31BQ9NQW1 1179 aa23.18■■□□□ 1.3
CGREF1-208ENST00000467539 E9PSI1 815 aa23.17■■□□□ 1.3
CGREF1-208ENST00000467539 GCKRQ14397 625 aa23.17■■□□□ 1.3
CGREF1-208ENST00000467539 AOC3Q16853 763 aa23.17■■□□□ 1.3
CGREF1-208ENST00000467539 NIM1KQ8IY84 436 aa23.17■■□□□ 1.3
CGREF1-208ENST00000467539 LINS1Q8NG48 757 aa23.17■■□□□ 1.3
CGREF1-208ENST00000467539 KIAA2012Q0VF49 1180 aa23.16■■□□□ 1.3
CGREF1-208ENST00000467539 TAF1DQ9H5J8 278 aaPredicted RBP23.16■■□□□ 1.3
CGREF1-208ENST00000467539 NSFL1CQ9UNZ2 370 aaKnown RBP23.16■■□□□ 1.3
CGREF1-208ENST00000467539 CACNA1FO60840 1977 aa23.16■■□□□ 1.3
CGREF1-208ENST00000467539 CEP350Q5VT06 3117 aa23.15■■□□□ 1.3
CGREF1-208ENST00000467539 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
CGREF1-208ENST00000467539 TTLL11Q8NHH1 800 aa23.15■■□□□ 1.3
CGREF1-208ENST00000467539 HACL1Q9UJ83 578 aa23.15■■□□□ 1.3
CGREF1-208ENST00000467539 ZNRF3Q9ULT6 936 aa23.15■■□□□ 1.3
CGREF1-208ENST00000467539 TAF1P21675 1872 aa23.14■■□□□ 1.29
CGREF1-208ENST00000467539 COL4A5P29400 1685 aa23.13■■□□□ 1.29
CGREF1-208ENST00000467539 CTSWP56202 376 aa23.13■■□□□ 1.29
CGREF1-208ENST00000467539 GPSM2P81274 684 aa23.13■■□□□ 1.29
CGREF1-208ENST00000467539 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
CGREF1-208ENST00000467539 WASHC4Q2M389 1173 aa23.12■■□□□ 1.29
CGREF1-208ENST00000467539 BEND3Q5T5X7 828 aa23.12■■□□□ 1.29
CGREF1-208ENST00000467539 CHADLQ6NUI6 762 aa23.12■■□□□ 1.29
CGREF1-208ENST00000467539 UBE3BQ7Z3V4 1068 aa23.12■■□□□ 1.29
CGREF1-208ENST00000467539 CCDC85AQ96PX6 553 aaPredicted RBP23.12■■□□□ 1.29
CGREF1-208ENST00000467539 PLA2G12BQ9BX93 195 aa23.12■■□□□ 1.29
CGREF1-208ENST00000467539 PODXL2Q9NZ53 605 aa23.12■■□□□ 1.29
CGREF1-208ENST00000467539 POLLQ9UGP5 575 aa23.12■■□□□ 1.29
CGREF1-208ENST00000467539 F6X3S4 739 aa23.11■■□□□ 1.29
CGREF1-208ENST00000467539 EPHX2P34913 555 aa23.11■■□□□ 1.29
CGREF1-208ENST00000467539 CASP7P55210 303 aa23.11■■□□□ 1.29
CGREF1-208ENST00000467539 CXCL9Q07325 125 aa23.11■■□□□ 1.29
CGREF1-208ENST00000467539 PNMA8AQ86V59 439 aaPredicted RBP23.11■■□□□ 1.29
CGREF1-208ENST00000467539 ANKRD18AQ8IVF6 992 aa23.11■■□□□ 1.29
CGREF1-208ENST00000467539 TRMT2AQ8IZ69 625 aaKnown RBP23.11■■□□□ 1.29
CGREF1-208ENST00000467539 DNAJC5GQ8N7S2 189 aa23.11■■□□□ 1.29
CGREF1-208ENST00000467539 C6orf229H3BNL8 230 aa23.1■■□□□ 1.29
CGREF1-208ENST00000467539 POTEIP0CG38 1075 aa23.1■■□□□ 1.29
CGREF1-208ENST00000467539 POTEJP0CG39 1038 aa23.1■■□□□ 1.29
CGREF1-208ENST00000467539 LDHDQ86WU2 507 aa23.1■■□□□ 1.29
CGREF1-208ENST00000467539 CSF1RP07333 972 aa23.09■■□□□ 1.29
CGREF1-208ENST00000467539 TBC1D16Q8TBP0 767 aa23.09■■□□□ 1.29
CGREF1-208ENST00000467539 CDCA7LQ96GN5 454 aa23.09■■□□□ 1.29
CGREF1-208ENST00000467539 CDC5LQ99459 802 aaKnown RBP23.09■■□□□ 1.29
CGREF1-208ENST00000467539 EYA3Q99504 573 aa23.09■■□□□ 1.29
CGREF1-208ENST00000467539 SCN4AP35499 1836 aa23.09■■□□□ 1.29
CGREF1-208ENST00000467539 TNIP1Q15025 636 aa23.08■■□□□ 1.29
CGREF1-208ENST00000467539 MRPL50Q8N5N7 158 aaKnown RBP23.08■■□□□ 1.29
CGREF1-208ENST00000467539 GREM2Q9H772 168 aa23.08■■□□□ 1.29
CGREF1-208ENST00000467539 RTL9Q8NET4 1388 aa23.08■■□□□ 1.29
CGREF1-208ENST00000467539 LMOD1P29536 600 aaPredicted RBP23.07■■□□□ 1.28
CGREF1-208ENST00000467539 SCNN1DP51172 638 aa23.07■■□□□ 1.28
CGREF1-208ENST00000467539 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
CGREF1-208ENST00000467539 CIAPIN1Q6FI81 312 aa23.07■■□□□ 1.28
CGREF1-208ENST00000467539 BSDC1Q9NW68 430 aaPredicted RBP23.07■■□□□ 1.28
CGREF1-208ENST00000467539 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
CGREF1-208ENST00000467539 COL4A1P02462 1669 aa23.06■■□□□ 1.28
CGREF1-208ENST00000467539 RIMBP2O15034 1052 aa23.06■■□□□ 1.28
CGREF1-208ENST00000467539 EPS15P42566 896 aa23.06■■□□□ 1.28
CGREF1-208ENST00000467539 EAPPQ56P03 285 aaPredicted RBP23.06■■□□□ 1.28
CGREF1-208ENST00000467539 ZC3H12CQ9C0D7 883 aaKnown RBP23.06■■□□□ 1.28
CGREF1-208ENST00000467539 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
CGREF1-208ENST00000467539 YDJCA8MPS7 323 aa23.05■■□□□ 1.28
CGREF1-208ENST00000467539 GGA1Q9UJY5 639 aa23.05■■□□□ 1.28
CGREF1-208ENST00000467539 CLEC11AQ9Y240 323 aa23.05■■□□□ 1.28
CGREF1-208ENST00000467539 ALDH1L1O75891 902 aa23.04■■□□□ 1.28
CGREF1-208ENST00000467539 RAD17O75943 681 aa23.04■■□□□ 1.28
CGREF1-208ENST00000467539 MIER1Q8N108 512 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms