RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 SNTG2Q9NY99 539 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 SUGT1Q9Y2Z0 365 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 PARP3Q9Y6F1 533 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 KLF4O43474 513 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 ST18O60284 1047 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 PARNO95453 639 aaKnown RBP6.26□□□□□ -1.41
MSH2-205ENST00000467323 ADH1AP07327 375 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 ETFBP38117 255 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 EIF4A3P38919 411 aaKnown RBP6.26□□□□□ -1.41
MSH2-205ENST00000467323 ARSHQ5FYA8 562 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 ZNF295-AS1Q8N0V1 137 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 NLRP3Q96P20 1036 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 HS3ST6Q96QI5 342 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 ZSCAN10Q96SZ4 725 aaPredicted RBP6.26□□□□□ -1.41
MSH2-205ENST00000467323 FHDC1Q9C0D6 1143 aaPredicted RBP6.26□□□□□ -1.41
MSH2-205ENST00000467323 SUV39H2Q9H5I1 410 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 MYH16Q9H6N6 1097 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 NPHS2Q9NP85 383 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 RIPOR2Q9Y4F9 1068 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 MRVI1Q9Y6F6 885 aa6.26□□□□□ -1.41
MSH2-205ENST00000467323 GBP2P32456 591 aaPredicted RBP6.25□□□□□ -1.41
MSH2-205ENST00000467323 SOX9P48436 509 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 IER5Q5VY09 327 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 TMEM214Q6NUQ4 689 aaKnown RBP6.25□□□□□ -1.41
MSH2-205ENST00000467323 RHPN1Q8TCX5 695 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 APPBP2Q92624 585 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 TMEM74Q96NL1 305 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 NT5C1AQ9BXI3 368 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 GINM1Q9NU53 330 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 PRKAG3Q9UGI9 489 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 ADAMTS1Q9UHI8 967 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 TRAK1Q9UPV9 953 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 BCS1LQ9Y276 419 aa6.25□□□□□ -1.41
MSH2-205ENST00000467323 S100BP04271 92 aaPredicted RBP6.24□□□□□ -1.41
MSH2-205ENST00000467323 ARSDP51689 593 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 RASA3Q14644 834 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 CCDC85BQ15834 202 aaPredicted RBP6.24□□□□□ -1.41
MSH2-205ENST00000467323 PLEKHG6Q3KR16 790 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 TNNI3KQ59H18 835 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 RC3H1Q5TC82 1133 aaKnown RBP6.24□□□□□ -1.41
MSH2-205ENST00000467323 HOMER1Q86YM7 354 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 GALNT12Q8IXK2 581 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 RHBDD1Q8TEB9 315 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 HNRNPLLQ8WVV9 542 aaKnown RBP6.24□□□□□ -1.41
MSH2-205ENST00000467323 PMEPA1Q969W9 287 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 IRF2BPLQ9H1B7 796 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 FANCLQ9NW38 375 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 CHPF2Q9P2E5 772 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 ANKIB1Q9P2G1 1089 aa6.24□□□□□ -1.41
MSH2-205ENST00000467323 MAGEC2Q9UBF1 373 aaPredicted RBP6.24□□□□□ -1.41
MSH2-205ENST00000467323 GPC6Q9Y625 555 aaPredicted RBP6.24□□□□□ -1.41
MSH2-205ENST00000467323 MINDY4BA8MYZ0 360 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 UBAP1LF5GYI3 381 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 MEN1O00255 615 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 TPD52L2O43399 206 aaKnown RBP6.23□□□□□ -1.41
MSH2-205ENST00000467323 RPIAP49247 311 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 IDH3AP50213 366 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 IFRD2Q12894 506 aaPredicted RBP6.23□□□□□ -1.41
MSH2-205ENST00000467323 NBPF1Q3BBV0 1214 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 GORABQ5T7V8 394 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 TRPM4Q8TD43 1214 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 SH3TC2Q8TF17 1288 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 ZNF296Q8WUU4 475 aaPredicted RBP6.23□□□□□ -1.41
MSH2-205ENST00000467323 ANAPC16Q96DE5 110 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 EAF1Q96JC9 268 aaPredicted RBP6.23□□□□□ -1.41
MSH2-205ENST00000467323 CCDC113Q9H0I3 377 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 ELP3Q9H9T3 547 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 TYW1Q9NV66 732 aaKnown RBP6.23□□□□□ -1.41
MSH2-205ENST00000467323 DDX56Q9NY93 547 aaKnown RBP6.23□□□□□ -1.41
MSH2-205ENST00000467323 PPM1HQ9ULR3 514 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 SUPT16HQ9Y5B9 1047 aaKnown RBP6.23□□□□□ -1.41
MSH2-205ENST00000467323 TLL2Q9Y6L7 1015 aa6.23□□□□□ -1.41
MSH2-205ENST00000467323 LOC102724159A0A0B4J2E5 919 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 TXLNAP40222 546 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 GRM2Q14416 872 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 PWP2Q15269 919 aaKnown RBP6.22□□□□□ -1.41
MSH2-205ENST00000467323 GNASQ5JWF2 1037 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 RPUSD2Q8IZ73 545 aaKnown RBP6.22□□□□□ -1.41
MSH2-205ENST00000467323 ANKLE1Q8NAG6 615 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 ANKRD24Q8TF21 1146 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 FAN1Q9Y2M0 1017 aa6.22□□□□□ -1.41
MSH2-205ENST00000467323 POTEB3A0JP26 581 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 FAM221BA6H8Z2 402 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 CCDC85CA6NKD9 419 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 PPEF1O14829 653 aaPredicted RBP6.21□□□□□ -1.42
MSH2-205ENST00000467323 CD2BP2O95400 341 aaKnown RBP6.21□□□□□ -1.42
MSH2-205ENST00000467323 POLR3DP05423 398 aaPredicted RBP6.21□□□□□ -1.42
MSH2-205ENST00000467323 GGCXP38435 758 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 PTGIRP43119 386 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 CBLBQ13191 982 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 POTEBQ6S5H4 581 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 SV2BQ7L1I2 683 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 CMTR1Q8N1G2 835 aaKnown RBP6.21□□□□□ -1.42
MSH2-205ENST00000467323 KCTD12Q96CX2 325 aaKnown RBP6.21□□□□□ -1.42
MSH2-205ENST00000467323 CCDC136Q96JN2 1154 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 SUSD3Q96L08 255 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 SRRTQ9BXP5 876 aaKnown RBP6.21□□□□□ -1.42
MSH2-205ENST00000467323 KCNQ5Q9NR82 932 aa6.21□□□□□ -1.42
MSH2-205ENST00000467323 RTCBQ9Y3I0 505 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms