RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SBF1O95248 1867 aa14□□□□□ -0.17
MSH5-212ENST00000467319 LTBP3Q9NS15 1303 aa14□□□□□ -0.17
MSH5-212ENST00000467319 NFKBIEO00221 500 aa14□□□□□ -0.17
MSH5-212ENST00000467319 SLC51AQ86UW1 340 aa14□□□□□ -0.17
MSH5-212ENST00000467319 RBM17Q96I25 401 aaKnown RBP14□□□□□ -0.17
MSH5-212ENST00000467319 TIAM2Q8IVF5 1701 aa14□□□□□ -0.17
MSH5-212ENST00000467319 C21orf2O43822 256 aa13.99□□□□□ -0.17
MSH5-212ENST00000467319 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
MSH5-212ENST00000467319 GRAPQ13588 217 aa13.99□□□□□ -0.17
MSH5-212ENST00000467319 SOGA3Q5TF21 947 aa13.99□□□□□ -0.17
MSH5-212ENST00000467319 ATF7IPQ6VMQ6 1270 aa13.99□□□□□ -0.17
MSH5-212ENST00000467319 GRAPLQ8TC17 118 aaPredicted RBP13.99□□□□□ -0.17
MSH5-212ENST00000467319 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
MSH5-212ENST00000467319 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
MSH5-212ENST00000467319 CCDC152Q4G0S7 254 aa13.98□□□□□ -0.17
MSH5-212ENST00000467319 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
MSH5-212ENST00000467319 TTLL11Q8NHH1 800 aa13.98□□□□□ -0.17
MSH5-212ENST00000467319 YTHDC1Q96MU7 727 aaKnown RBP13.98□□□□□ -0.17
MSH5-212ENST00000467319 TNNQ9UQP3 1299 aa13.98□□□□□ -0.17
MSH5-212ENST00000467319 SPEF2Q9C093 1822 aa13.98□□□□□ -0.17
MSH5-212ENST00000467319 A0A1B0GUL6 1792 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 CSF1RP07333 972 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
MSH5-212ENST00000467319 PRELPP51888 382 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 FOXO4P98177 505 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 RASSF7Q02833 373 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 CCDC93Q567U6 631 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
MSH5-212ENST00000467319 CELF1Q92879 486 aaKnown RBP13.97□□□□□ -0.17
MSH5-212ENST00000467319 KAZALD1Q96I82 304 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 USP44Q9H0E7 712 aa13.97□□□□□ -0.17
MSH5-212ENST00000467319 DICER1Q9UPY3 1922 aaKnown RBP13.96□□□□□ -0.17
MSH5-212ENST00000467319 BBOX1O75936 387 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 FAM161AQ3B820 660 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 EPHA10Q5JZY3 1008 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 ZKSCAN2Q63HK3 967 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 CC2D2BQ6DHV5 1058 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 ARHGAP27Q6ZUM4 889 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 TMC4Q7Z404 712 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 FRAT1Q92837 279 aaPredicted RBP13.96□□□□□ -0.17
MSH5-212ENST00000467319 GREM2Q9H772 168 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 RCAN3Q9UKA8 241 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 ATP6V0A2Q9Y487 856 aa13.96□□□□□ -0.17
MSH5-212ENST00000467319 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
MSH5-212ENST00000467319 SUCLG2Q96I99 432 aa13.95□□□□□ -0.18
MSH5-212ENST00000467319 TAOK3Q9H2K8 898 aa13.95□□□□□ -0.18
MSH5-212ENST00000467319 C9orf78Q9NZ63 289 aaPredicted RBP13.95□□□□□ -0.18
MSH5-212ENST00000467319 COL4A5P29400 1685 aa13.95□□□□□ -0.18
MSH5-212ENST00000467319 GRIPAP1Q4V328 841 aa13.94□□□□□ -0.18
MSH5-212ENST00000467319 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
MSH5-212ENST00000467319 ANKRD44Q8N8A2 993 aa13.94□□□□□ -0.18
MSH5-212ENST00000467319 PSMD1Q99460 953 aa13.94□□□□□ -0.18
MSH5-212ENST00000467319 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
MSH5-212ENST00000467319 RLBP1P12271 317 aa13.93□□□□□ -0.18
MSH5-212ENST00000467319 LMNB1P20700 586 aa13.93□□□□□ -0.18
MSH5-212ENST00000467319 FKBP4Q02790 459 aaKnown RBP eCLIP13.93□□□□□ -0.18
MSH5-212ENST00000467319 SP8Q8IXZ3 490 aa13.93□□□□□ -0.18
MSH5-212ENST00000467319 CCDC85AQ96PX6 553 aaPredicted RBP13.93□□□□□ -0.18
MSH5-212ENST00000467319 CDC5LQ99459 802 aaKnown RBP13.93□□□□□ -0.18
MSH5-212ENST00000467319 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
MSH5-212ENST00000467319 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
MSH5-212ENST00000467319 ZC3H4Q9UPT8 1303 aaKnown RBP13.92□□□□□ -0.18
MSH5-212ENST00000467319 ITGA6P23229 1130 aa13.92□□□□□ -0.18
MSH5-212ENST00000467319 RPS8P62241 208 aaKnown RBP13.92□□□□□ -0.18
MSH5-212ENST00000467319 LMBR1LQ6UX01 489 aa13.92□□□□□ -0.18
MSH5-212ENST00000467319 TMEM57Q8N5G2 664 aa13.92□□□□□ -0.18
MSH5-212ENST00000467319 CLUAP1Q96AJ1 413 aa13.92□□□□□ -0.18
MSH5-212ENST00000467319 MEIS3Q99687 375 aa13.92□□□□□ -0.18
MSH5-212ENST00000467319 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
MSH5-212ENST00000467319 C9orf131Q5VYM1 1079 aa13.91□□□□□ -0.18
MSH5-212ENST00000467319 UBTFL1P0CB47 393 aaPredicted RBP13.9□□□□□ -0.18
MSH5-212ENST00000467319 ANKRD18AQ8IVF6 992 aa13.9□□□□□ -0.18
MSH5-212ENST00000467319 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
MSH5-212ENST00000467319 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
MSH5-212ENST00000467319 RNF181Q9P0P0 153 aa13.9□□□□□ -0.18
MSH5-212ENST00000467319 YY1P25490 414 aa13.89□□□□□ -0.19
MSH5-212ENST00000467319 IFIT5Q13325 482 aaKnown RBP13.89□□□□□ -0.19
MSH5-212ENST00000467319 FTSJ3Q8IY81 847 aaKnown RBP13.89□□□□□ -0.19
MSH5-212ENST00000467319 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
MSH5-212ENST00000467319 PODXL2Q9NZ53 605 aa13.89□□□□□ -0.19
MSH5-212ENST00000467319 ANKRD18BA2A2Z9 1011 aa13.88□□□□□ -0.19
MSH5-212ENST00000467319 GNAI3P08754 354 aa13.88□□□□□ -0.19
MSH5-212ENST00000467319 GPSM2P81274 684 aa13.88□□□□□ -0.19
MSH5-212ENST00000467319 DPP8Q6V1X1 898 aaPredicted RBP13.88□□□□□ -0.19
MSH5-212ENST00000467319 PANK1Q8TE04 598 aa13.88□□□□□ -0.19
MSH5-212ENST00000467319 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
MSH5-212ENST00000467319 IGHMBP2P38935 993 aaKnown RBP13.87□□□□□ -0.19
MSH5-212ENST00000467319 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
MSH5-212ENST00000467319 MTX1Q13505 466 aa13.87□□□□□ -0.19
MSH5-212ENST00000467319 MPNDQ8N594 471 aa13.87□□□□□ -0.19
MSH5-212ENST00000467319 TMX4Q9H1E5 349 aaPredicted RBP13.87□□□□□ -0.19
MSH5-212ENST00000467319 XDHP47989 1333 aa13.87□□□□□ -0.19
MSH5-212ENST00000467319 PLIN1O60240 522 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 MS4A1P11836 297 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 RFX5P48382 616 aaPredicted RBP13.86□□□□□ -0.19
MSH5-212ENST00000467319 KIAA2012Q0VF49 1180 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 ITPRIPQ8IWB1 547 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms