RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ATP5J2-PTCD1G3V325 749 aa8.36□□□□□ -1.07
PTCD3-207ENST00000467273 FURINP09958 794 aa8.36□□□□□ -1.07
PTCD3-207ENST00000467273 SNRPNP63162 240 aaKnown RBP8.36□□□□□ -1.07
PTCD3-207ENST00000467273 HFM1A2PYH4 1435 aa8.36□□□□□ -1.07
PTCD3-207ENST00000467273 CDC42BPGQ6DT37 1551 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 NWD2Q9ULI1 1742 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 KRBA1A5PL33 1030 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 OIP5O43482 229 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 PNMA1Q8ND90 353 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 ORAI2Q96SN7 254 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 GOPCQ9HD26 462 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 DYRK1BQ9Y463 629 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 DISP2A7MBM2 1401 aa8.35□□□□□ -1.07
PTCD3-207ENST00000467273 USP32Q8NFA0 1604 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 YY1P25490 414 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 POU4F2Q12837 409 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 VPS72Q15906 364 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 EPS8L1Q8TE68 723 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 OXCT2Q9BYC2 517 aaPredicted RBP8.34□□□□□ -1.07
PTCD3-207ENST00000467273 RRAGCQ9HB90 399 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 RGPD1P0DJD0 1748 aa8.34□□□□□ -1.07
PTCD3-207ENST00000467273 ESPNB1AK53 854 aa8.33□□□□□ -1.08
PTCD3-207ENST00000467273 AP1G2O75843 785 aa8.33□□□□□ -1.08
PTCD3-207ENST00000467273 KRT27Q7Z3Y8 459 aa8.33□□□□□ -1.08
PTCD3-207ENST00000467273 LRRC4BQ9NT99 713 aa8.33□□□□□ -1.08
PTCD3-207ENST00000467273 MKL2Q9ULH7 1088 aa8.33□□□□□ -1.08
PTCD3-207ENST00000467273 NEXMIFQ5QGS0 1516 aa8.33□□□□□ -1.08
PTCD3-207ENST00000467273 GPC1P35052 558 aa8.32□□□□□ -1.08
PTCD3-207ENST00000467273 PCMTD1Q96MG8 357 aaPredicted RBP8.32□□□□□ -1.08
PTCD3-207ENST00000467273 NLRP3Q96P20 1036 aa8.32□□□□□ -1.08
PTCD3-207ENST00000467273 NUCKS1Q9H1E3 243 aaKnown RBP8.32□□□□□ -1.08
PTCD3-207ENST00000467273 ROCK1Q13464 1354 aa8.32□□□□□ -1.08
PTCD3-207ENST00000467273 ROBO2Q9HCK4 1378 aa8.32□□□□□ -1.08
PTCD3-207ENST00000467273 KIF1AQ12756 1690 aa8.31□□□□□ -1.08
PTCD3-207ENST00000467273 A0A1W2PRU2 124 aa8.31□□□□□ -1.08
PTCD3-207ENST00000467273 ZNF326Q5BKZ1 582 aaKnown RBP8.31□□□□□ -1.08
PTCD3-207ENST00000467273 ESCO1Q5FWF5 840 aa8.31□□□□□ -1.08
PTCD3-207ENST00000467273 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
PTCD3-207ENST00000467273 PPP2R2DQ66LE6 453 aa8.31□□□□□ -1.08
PTCD3-207ENST00000467273 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
PTCD3-207ENST00000467273 ADGRB2O60241 1585 aa8.31□□□□□ -1.08
PTCD3-207ENST00000467273 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 MAP2K3P46734 347 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 GRIN2CQ14957 1233 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 NBPF10Q6P3W6 841 aaKnown RBP8.3□□□□□ -1.08
PTCD3-207ENST00000467273 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 PSMG3-AS1Q96PY0 264 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 PLCH1Q4KWH8 1693 aa8.3□□□□□ -1.08
PTCD3-207ENST00000467273 SPATA31A3Q5VYP0 1347 aa8.29□□□□□ -1.08
PTCD3-207ENST00000467273 FOXO3O43524 673 aa8.29□□□□□ -1.08
PTCD3-207ENST00000467273 COL8A1P27658 744 aa8.29□□□□□ -1.08
PTCD3-207ENST00000467273 HMX1Q9NP08 348 aaPredicted RBP8.29□□□□□ -1.08
PTCD3-207ENST00000467273 TIMMDC1Q9NPL8 285 aa8.29□□□□□ -1.08
PTCD3-207ENST00000467273 NUP155O75694 1391 aa8.29□□□□□ -1.08
PTCD3-207ENST00000467273 R3HDM1Q15032 1099 aaKnown RBP8.28□□□□□ -1.08
PTCD3-207ENST00000467273 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
PTCD3-207ENST00000467273 KIF1BO60333 1816 aa8.28□□□□□ -1.08
PTCD3-207ENST00000467273 TNS1Q9HBL0 1735 aaKnown RBP8.28□□□□□ -1.08
PTCD3-207ENST00000467273 NINLQ9Y2I6 1382 aa8.27□□□□□ -1.09
PTCD3-207ENST00000467273 AMPD1P23109 780 aa8.27□□□□□ -1.09
PTCD3-207ENST00000467273 ALYREFQ86V81 257 aaKnown RBP8.27□□□□□ -1.09
PTCD3-207ENST00000467273 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
PTCD3-207ENST00000467273 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
PTCD3-207ENST00000467273 RPGRIP1LQ68CZ1 1315 aa8.27□□□□□ -1.09
PTCD3-207ENST00000467273 CLTCL1P53675 1640 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
PTCD3-207ENST00000467273 F11P03951 625 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 TAS1R3Q7RTX0 852 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 CCDC9Q9Y3X0 531 aaKnown RBP8.26□□□□□ -1.09
PTCD3-207ENST00000467273 PCDHB9Q9Y5E1 797 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 TECPR2O15040 1411 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 NAIPQ13075 1403 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 TNS3Q68CZ2 1445 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 NRAPQ86VF7 1730 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 ABCA3Q99758 1704 aa8.26□□□□□ -1.09
PTCD3-207ENST00000467273 SBNO1A3KN83 1393 aa8.25□□□□□ -1.09
PTCD3-207ENST00000467273 ARHGEF10O15013 1369 aa8.25□□□□□ -1.09
PTCD3-207ENST00000467273 PSME1Q06323 249 aa8.25□□□□□ -1.09
PTCD3-207ENST00000467273 FAM50AQ14320 339 aaKnown RBP8.25□□□□□ -1.09
PTCD3-207ENST00000467273 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
PTCD3-207ENST00000467273 KLRG1Q96E93 195 aa8.25□□□□□ -1.09
PTCD3-207ENST00000467273 GRIP2Q9C0E4 1043 aa8.25□□□□□ -1.09
PTCD3-207ENST00000467273 FMN2Q9NZ56 1722 aa8.25□□□□□ -1.09
PTCD3-207ENST00000467273 RREB1Q92766 1687 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 THSD7AQ9UPZ6 1657 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 WASLO00401 505 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-207ENST00000467273 XPCQ01831 940 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-207ENST00000467273 FLIIQ13045 1269 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 CLN3Q13286 438 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 CYP2U1Q7Z449 544 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 EDARADDQ8WWZ3 215 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 ARHGEF10LQ9HCE6 1279 aa8.24□□□□□ -1.09
PTCD3-207ENST00000467273 GDF2Q9UK05 429 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-207ENST00000467273 PHF24Q9UPV7 400 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms