RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 KIAA2012Q0VF49 1180 aa24.61■■□□□ 1.53
SRSF4-202ENST00000466448 GRAPQ13588 217 aa24.61■■□□□ 1.53
SRSF4-202ENST00000466448 GRAPLQ8TC17 118 aaPredicted RBP24.61■■□□□ 1.53
SRSF4-202ENST00000466448 ZNF428Q96B54 188 aa24.61■■□□□ 1.53
SRSF4-202ENST00000466448 TRIM35Q9UPQ4 493 aa24.61■■□□□ 1.53
SRSF4-202ENST00000466448 LAS1LQ9Y4W2 734 aaKnown RBP24.61■■□□□ 1.53
SRSF4-202ENST00000466448 MYBBP1AQ9BQG0 1328 aaKnown RBP24.61■■□□□ 1.53
SRSF4-202ENST00000466448 LAMB2P55268 1798 aa24.59■■□□□ 1.53
SRSF4-202ENST00000466448 HSPA8P11142 646 aaKnown RBP24.59■■□□□ 1.53
SRSF4-202ENST00000466448 CAPNS2Q96L46 248 aa24.59■■□□□ 1.53
SRSF4-202ENST00000466448 HDGFL1Q5TGJ6 251 aa24.58■■□□□ 1.53
SRSF4-202ENST00000466448 CIAPIN1Q6FI81 312 aa24.58■■□□□ 1.53
SRSF4-202ENST00000466448 PAXIP1Q6ZW49 1069 aaPredicted RBP24.58■■□□□ 1.53
SRSF4-202ENST00000466448 RUNDC1Q96C34 613 aa24.58■■□□□ 1.53
SRSF4-202ENST00000466448 THSD7BQ9C0I4 1608 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 RAD17O75943 681 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 GRM1Q13255 1194 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 CYP4F22Q6NT55 531 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 PLBD2Q8NHP8 589 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 TLL2Q9Y6L7 1015 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 DUOX1Q9NRD9 1551 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 CDHR2Q9BYE9 1310 aa24.57■■□□□ 1.52
SRSF4-202ENST00000466448 ECE1P42892 770 aa24.56■■□□□ 1.52
SRSF4-202ENST00000466448 HOXB7P09629 217 aa24.55■■□□□ 1.52
SRSF4-202ENST00000466448 DDX10Q13206 875 aaKnown RBP24.55■■□□□ 1.52
SRSF4-202ENST00000466448 TNIP1Q15025 636 aa24.55■■□□□ 1.52
SRSF4-202ENST00000466448 ANKRD13DQ6ZTN6 518 aa24.55■■□□□ 1.52
SRSF4-202ENST00000466448 TMC4Q7Z404 712 aa24.55■■□□□ 1.52
SRSF4-202ENST00000466448 GPR101Q96P66 508 aaPredicted RBP24.55■■□□□ 1.52
SRSF4-202ENST00000466448 BCL2L13Q9BXK5 485 aa24.55■■□□□ 1.52
SRSF4-202ENST00000466448 YDJCA8MPS7 323 aa24.54■■□□□ 1.52
SRSF4-202ENST00000466448 WDR43Q15061 677 aaKnown RBP eCLIP24.54■■□□□ 1.524e-6■□□□□ 11
SRSF4-202ENST00000466448 FAM89AQ96GI7 184 aa24.54■■□□□ 1.52
SRSF4-202ENST00000466448 ISCA1Q9BUE6 129 aa24.54■■□□□ 1.52
SRSF4-202ENST00000466448 GLIS2Q9BZE0 524 aaPredicted RBP24.54■■□□□ 1.52
SRSF4-202ENST00000466448 DBF4Q9UBU7 674 aaPredicted RBP24.54■■□□□ 1.52
SRSF4-202ENST00000466448 PGAP2Q9UHJ9 254 aa24.54■■□□□ 1.52
SRSF4-202ENST00000466448 ATP5J2-PTCD1G3V325 749 aa24.53■■□□□ 1.52
SRSF4-202ENST00000466448 HIRAP54198 1017 aaPredicted RBP24.53■■□□□ 1.52
SRSF4-202ENST00000466448 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
SRSF4-202ENST00000466448 LRRC37AA6NMS7 1700 aa24.52■■□□□ 1.52
SRSF4-202ENST00000466448 CELF2O95319 508 aaKnown RBP24.52■■□□□ 1.52
SRSF4-202ENST00000466448 SAPCD2Q86UD0 394 aa24.52■■□□□ 1.52
SRSF4-202ENST00000466448 TRPM4Q8TD43 1214 aa24.52■■□□□ 1.52
SRSF4-202ENST00000466448 CELF1Q92879 486 aaKnown RBP24.52■■□□□ 1.52
SRSF4-202ENST00000466448 SHTN1A0MZ66 631 aa24.51■■□□□ 1.51
SRSF4-202ENST00000466448 SF3B3Q15393 1217 aaKnown RBP24.51■■□□□ 1.51
SRSF4-202ENST00000466448 ZC3H15Q8WU90 426 aaKnown RBP24.51■■□□□ 1.51
SRSF4-202ENST00000466448 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
SRSF4-202ENST00000466448 DDX60Q8IY21 1712 aaKnown RBP24.5■■□□□ 1.51
SRSF4-202ENST00000466448 DUSP27Q5VZP5 1158 aa24.5■■□□□ 1.51
SRSF4-202ENST00000466448 HYPKQ9NX55 129 aa24.5■■□□□ 1.51
SRSF4-202ENST00000466448 CNOT7Q9UIV1 285 aaKnown RBP24.5■■□□□ 1.51
SRSF4-202ENST00000466448 NSFL1CQ9UNZ2 370 aaKnown RBP24.5■■□□□ 1.51
SRSF4-202ENST00000466448 COL4A1P02462 1669 aa24.5■■□□□ 1.51
SRSF4-202ENST00000466448 AOC2O75106 756 aa24.49■■□□□ 1.51
SRSF4-202ENST00000466448 WASHC4Q2M389 1173 aa24.49■■□□□ 1.51
SRSF4-202ENST00000466448 RTL5Q5HYW3 569 aaPredicted RBP24.49■■□□□ 1.51
SRSF4-202ENST00000466448 BEGAINQ9BUH8 593 aa24.49■■□□□ 1.51
SRSF4-202ENST00000466448 TAF1P21675 1872 aa24.48■■□□□ 1.51
SRSF4-202ENST00000466448 MICALL2Q8IY33 904 aa24.48■■□□□ 1.51
SRSF4-202ENST00000466448 MBIPQ9NS73 344 aa24.48■■□□□ 1.51
SRSF4-202ENST00000466448 ZBTB12Q9Y330 459 aaPredicted RBP24.48■■□□□ 1.51
SRSF4-202ENST00000466448 TRPM7Q96QT4 1865 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 H7C1D1 291 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 MAP2K2P36507 400 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 GPSM2P81274 684 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 TRIM28Q13263 835 aaKnown RBP24.47■■□□□ 1.51
SRSF4-202ENST00000466448 CDC37L1Q7L3B6 337 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 ABHD8Q96I13 439 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 ZNF408Q9H9D4 720 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 DBNDD1Q9H9R9 158 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 POLLQ9UGP5 575 aa24.47■■□□□ 1.51
SRSF4-202ENST00000466448 PSMD14O00487 310 aa24.46■■□□□ 1.51
SRSF4-202ENST00000466448 IRS4O14654 1257 aaPredicted RBP24.46■■□□□ 1.51
SRSF4-202ENST00000466448 RIMBP2O15034 1052 aa24.46■■□□□ 1.51
SRSF4-202ENST00000466448 HHIPL1Q96JK4 782 aa24.46■■□□□ 1.51
SRSF4-202ENST00000466448 C6orf229H3BNL8 230 aa24.45■■□□□ 1.5
SRSF4-202ENST00000466448 DPF2Q92785 391 aa24.45■■□□□ 1.5
SRSF4-202ENST00000466448 ZNF853P0CG23 659 aa24.44■■□□□ 1.5
SRSF4-202ENST00000466448 SAMD7Q7Z3H4 446 aa24.44■■□□□ 1.5
SRSF4-202ENST00000466448 TSKSQ9UJT2 592 aa24.44■■□□□ 1.5
SRSF4-202ENST00000466448 DLK2Q6UY11 383 aa24.43■■□□□ 1.5
SRSF4-202ENST00000466448 RIC3Q7Z5B4 369 aa24.43■■□□□ 1.5
SRSF4-202ENST00000466448 USP48Q86UV5 1035 aa24.43■■□□□ 1.5
SRSF4-202ENST00000466448 KCNQ5Q9NR82 932 aa24.43■■□□□ 1.5
SRSF4-202ENST00000466448 RTL9Q8NET4 1388 aa24.42■■□□□ 1.5
SRSF4-202ENST00000466448 ECE2O60344 883 aa24.42■■□□□ 1.5
SRSF4-202ENST00000466448 EGFRP00533 1210 aa24.42■■□□□ 1.5
SRSF4-202ENST00000466448 RPS8P62241 208 aaKnown RBP24.42■■□□□ 1.5
SRSF4-202ENST00000466448 DOK7Q18PE1 504 aa24.42■■□□□ 1.5
SRSF4-202ENST00000466448 TBC1D16Q8TBP0 767 aa24.42■■□□□ 1.5
SRSF4-202ENST00000466448 PHAXQ9H814 394 aaKnown RBP24.42■■□□□ 1.5
SRSF4-202ENST00000466448 GOLGA2Q08379 1002 aa24.41■■□□□ 1.5
SRSF4-202ENST00000466448 TBC1D10BQ4KMP7 808 aaPredicted RBP24.41■■□□□ 1.5
SRSF4-202ENST00000466448 ZBTB38Q8NAP3 1195 aaPredicted RBP24.41■■□□□ 1.5
SRSF4-202ENST00000466448 EYA3Q99504 573 aa24.41■■□□□ 1.5
SRSF4-202ENST00000466448 RPS12P25398 132 aaKnown RBP24.4■■□□□ 1.5
SRSF4-202ENST00000466448 BRPF1P55201 1214 aaPredicted RBP24.4■■□□□ 1.5
SRSF4-202ENST00000466448 SEC31BQ9NQW1 1179 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms